Nematolebias whitei (Rio pearlfish): 119422940
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Entry
119422940 CDS
T08042
Name
(RefSeq) very long-chain acyl-CoA synthetase-like isoform X1
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03320
PPAR signaling pathway
nwh04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119422940
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
119422940
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nwh01004
]
119422940
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119422940
Enzymes [BR:
nwh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
119422940
Lipid biosynthesis proteins [BR:
nwh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
119422940
Transporters [BR:
nwh02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
119422940
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
119422940
NCBI-ProteinID:
XP_037546283
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Position
2:13384840..13394075
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AA seq
615 aa
AA seq
DB search
MIAFILLTILPVLPVLLYWGNPYFLEDLKCVIREIQIRREFGKILKNFFSLVDCFLDQVK
KHPQKTFLVFEDSSYTYSQADRESNKVARALQTHTHLKEGDTVALFLGNEPQFVWVWLGL
AKLGCVASLLNTNIRSKSLLHCFSCCEAKVLITGAELRGAVEEVLPALREQGVRVFLLSE
SCDVEGMESLSDHIQQASDQPLSPQLKANMNFKTPALYIYTSGTTGLPKAAVVIHQKLWR
ASLIASNVGVHSNDVLYLNMPLYHSAGFMLGLCGAIERGCTVVLRRKFSASNFWNDCRKY
NVTVIQYIGETMRYLCNMPKRDNDKDHKVRLAVGNGIRADTWTEFLEQFGNVRICEFYGA
TESNVAFVNYTGKVGAIGREHFLHKLRNPYALIEYDTETEEPIRDSRGFCIKVPKGETGL
LVAKIGVRTPFFGYAKNEQQTERKKLKDVFEKGDVYFNSGDLLRIDNEGFIYFQDRIGDT
FRWKGENVATTEVADLLLTVDFVEEANVYGVKVPGYEGRIGMAALTLKENVDFDNKLIYQ
HVKNYLPSYARPRFIRIQDALPVTGTFKQLKKKLSAEGFNPNVIQDPLFFLEDNEGYVSM
SQEIFSSISEGTLRL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgattgcatttattcttttgaccattttgcctgttttaccagttttgctttattgggga
aatccttattttctggaagatttgaaatgtgtaatcagagaaattcagattaggcgagaa
tttggcaaaatcctgaagaatttcttcagtcttgtggactgttttctggaccaagtgaag
aagcatccccagaaaaccttcctggtgtttgaggacagctcctacacctacagccaggcc
gacagagagagcaacaaagtagccagagctctgcagacgcacacgcacctgaaggagggg
gacacggtggccctgttcctgggaaacgagccccagttcgtgtgggtctggctcgggctg
gccaaactgggctgtgtggcatctctgctgaacaccaacatcagatccaagtctctgctt
cactgcttctcctgctgcgaagccaaagtcctcatcactggagccgaactgcgaggagct
gtagaggaggtgctgccggccctgagggagcagggtgtccgtgtgtttctcctcagtgag
agctgtgatgtagagggcatggagagcctctctgaccacatccagcaggcctcagatcag
cctctgtctccacagctgaaggccaacatgaactttaaaactccagcgttatatatctac
acctcagggaccacaggacttcccaaggcagctgttgttatccaccagaagttatggagg
gcatctctcattgcttctaatgttggtgttcattccaacgatgtcctttacttaaacatg
ccgctgtaccacagtgcaggcttcatgttgggactctgtggagccatagaaagaggctgc
actgttgttctgaggcgcaagttctctgcttccaacttctggaacgactgcaggaagtac
aacgtgactgtcattcagtacataggagagaccatgcgttacctgtgcaacatgccaaag
agggacaacgacaaggaccataaggtgcgactggctgtggggaacggaataagggccgac
acctggacagagttcctggagcaatttgggaacgtccggatctgtgaattctatggagcg
acagaatccaatgttgcctttgtaaactatactggaaaagttggagctattggcagggag
catttcctccacaaattaagaaacccgtatgccctgatagagtatgacacagagacagag
gagcccatcagagactcaagaggattctgcattaaagtcccaaaaggagagacaggtttg
ctggtggcaaagatcggagtaagaacgcctttctttggatatgccaagaacgagcagcag
acagagaggaagaagctgaaggacgtgtttgagaagggagacgtctactttaacagtgga
gatctgttaaggatcgacaacgagggatttatttactttcaggatcggattggagacact
ttcaggtggaagggagaaaatgtggcgaccacagaggtggctgatcttttgctgacagtg
gactttgttgaggaggctaacgtctacggggtgaaggtgccagggtatgaaggaagaatt
ggaatggcagctctgacgctgaaagaaaacgtggattttgacaacaaattaatttatcag
cacgtcaaaaactacctcccgagctacgccaggccacgcttcatacgtatacaggatgct
ctgccggtgactggaacgtttaaacagctgaagaaaaagctttctgcagagggtttcaac
cccaacgtcatccaggaccctttattcttcctggaggacaacgaaggctacgtctccatg
agccaggaaatattcagctccatctcagaaggaacactcaggctctga
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