Nematolebias whitei (Rio pearlfish): 119423012
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Entry
119423012 CDS
T08042
Symbol
pkd2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nwh03037
]
119423012 (pkd2)
04040 Ion channels [BR:
nwh04040
]
119423012 (pkd2)
Cilium and associated proteins [BR:
nwh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119423012 (pkd2)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119423012 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_7
LeuA_dimer
Motif
Other DBs
NCBI-GeneID:
119423012
NCBI-ProteinID:
XP_037546351
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All DBs
Position
16:2052104..2073937
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AA seq
950 aa
AA seq
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MVDCTVGCTVGCTVDCTVDCTVDCTFWTNPKTTRPSLEAVSSSRPDVLHTLRAKPKLRNV
QVIQHPDLERIQHPDLERIQHPDLERIQHPDLGLGVLGTSSPPSRQAWSRDNPGFELEEE
IMEADWPSASPVRRSVSAASSCSSGRESRSNRGQVLRGGPLPTRSLNASQQNGHERLSCM
KQILQKIRILWGTDLMEDSDNSREQYLWNVLREMLTYIAFLVTICVLTYGMVNSNMYYYT
KVMSKLFLDTPLFPGDPATFRSLSTMEDFWKFTQGPFLSGVYWEVWYNNKSLPENQTLIY
YENLLLGVPRLRQVRVHNESCSIYKDLQDEVQDCYNIYTPSNEDTASFGPKNGTAWVYTR
ESEMNGSSFWGQVSRYGGGGYYQDLSRTREESAAQLQFLKDHLWLDRGTRAVFLDFSVYN
RNINLFCVARLLVEFPATGGMETSWQFQTVRLIRYLSSWDYFVGMCEVAFCLFILYYVVE
EVLEIHLHRLHYFRSVWNCLDVLIVVLSVVAIIMNITRTAMARNLLNDLLENYSAHASFE
RLADLQVHFNNMAAVIVFFSWVKLFKFINVNQTMSQLTSTMSRCAKDLCGFAIMFFIIFL
AYAQLAYLVFGTQVNDFSTFQASIFTQFRIVLGDFNFSEMEEAHPVLGPVYFTTFVFFIF
FILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLLKKCCNKALMKLRLKKTAVDDLSDTE
QQAGGKLNSDELHHNLKGKGPTEAAIQAIFAKYNQDGDPELTEQEHQQMKDDLEKDREDL
ELERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSYEEFQVLVRRVDRM
EHSIGSIVSKIDAVIVKLEGMERSKLKRRDVLSRLLDGFVEDERLGRHTDAHREQMERLV
REELERWDLDDTVSQASHPQQATPGGPLPRPPSSLSINSLDTSADGGVHV
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggtggactgcaccgtgggctgcaccgtgggctgcacagtggactgcaccgtggactgc
accgtggactgcaccttctggacgaacccaaagacaacgagaccttctctggaggccgtg
tccagcagcaggcctgatgttctgcacactctcagagccaaacccaagttgaggaatgtg
caggtgatccagcatccagacctggagaggatccagcatccagacctggaaaggatccag
catccagacctggagaggatccagcatccagacctgggcctcggggttttagggacttcg
tccccgccgtccagacaggcgtggagtcgggacaacccgggctttgagctcgaggaggag
atcatggaagcggactggccttcagcgagtcccgtgaggaggtctgtgtccgcggcctcc
agctgcagcagcggccgggagagccgctccaaccgcggccaggtgctccgaggaggaccg
ctgcccacccggagcctgaacgcctcacagcagaacggacatgagcgcctgagctgcatg
aagcagatcctgcaaaagatcagaatcttgtggggcacagacctgatggaggatagcgac
aacagccgagaacagtacctctggaacgttttgagggagatgctgacatacatcgcgttc
cttgttaccatttgtgtcttgacctatgggatggtgaacagcaacatgtactattacacc
aaagttatgtccaagctgttcctcgacacgccactgtttccaggagaccctgctactttc
aggagcctctccaccatggaggatttctggaagtttacacaggggcccttcctcagtggc
gtgtactgggaggtttggtacaacaacaagagcctcccagagaaccagactctcatctac
tacgagaatcttcttctcggggtgccgaggctccggcaggtcagagtccacaacgagtcc
tgctccatctacaaggatctgcaggatgaagtccaagactgctacaacatttatactccg
agcaacgaggacaccgcctcctttggcccaaagaatggaacagcgtgggtgtacaccagg
gagagtgagatgaacggcagcagtttctggggtcaggtgtcgaggtacggaggtggagga
tactaccaggacttgtctcgaacaagagaggagtcagccgctcagctgcagttcctcaaa
gaccacctctggctggacagaggcacaagagccgtcttcctcgacttctctgtctacaac
agaaacataaatcttttttgtgttgccaggttgttggtggagttccctgcaactggtggg
atggagacctcttggcagttccagacagtacgtctgatacgatatctatccagctgggac
tactttgtgggcatgtgtgaagtggcattctgcctgttcatcctctactacgtggtggaa
gaagttctggaaatccacctccaccggctgcattacttcaggagcgtgtggaactgtctg
gatgttctcatagttgtgctgagtgttgttgccatcatcatgaacataaccagaacagcc
atggccagaaacctgctcaatgacctgctggagaactactccgctcacgccagctttgag
cgtttggccgacctgcaggtccactttaacaacatggctgctgttatcgtcttcttctcc
tgggtcaagttgttcaagttcattaacgttaaccaaaccatgagtcagctgaccagcacc
atgtcccgctgcgccaaagatctctgtgggtttgcgatcatgttcttcatcatcttcctg
gcgtacgctcagctggcctacttggtgtttggaactcaagtcaatgacttcagcactttc
caagccagcatatttactcagttccgaatcgttcttggtgactttaacttctcagagatg
gaggaggcacatccggtgcttgggcctgtatattttacaacctttgtcttcttcattttc
tttattctcatgaacatgttcctggccatcatcaatgacacctactctgaggtgaaggcg
gacatgtcgcagcagagatctgagatggaaatgactgatctcctaaagaagtgctgtaac
aaagctttgatgaagttaagactgaagaagacggcggtcgacgacctctccgacactgag
cagcaagcgggggggaaactgaactctgacgaacttcatcacaatttaaagggaaagggc
cccacagaagcagcgattcaggccatctttgcaaagtacaaccaggatggagaccccgag
ctgacggagcaggagcaccagcagatgaaagacgacctggagaaagacagagaggacttg
gagctggagcgtaattcactgactcgacccagcagtgggcggagcttccctcgcactcag
gatgactcggaagaggacgacgatgaggactcgggtcacagttctcgtcgccgcggaagc
agctcggggggtgtctcgtacgaagagtttcaagtgctggtgaggcgggtggacaggatg
gagcactccatcggcagcatagtgtccaagatcgacgctgtgatcgtgaagctggagggg
atggagagaagcaaactgaagaggagagacgtgctgagcaggctgctggacggcttcgtg
gaggacgagcgtttgggacggcacacagacgcccacagggagcagatggaaagactcgtg
agagaggaactggagcgctgggacttggacgataccgtgtcgcaggccagccaccctcag
caggctactcccggcggcccgctgccacgcccgccctcctccctgtccatcaacagtctg
gacacaagtgctgacggaggcgtccatgtgtga
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