Nematolebias whitei (Rio pearlfish): 119423020
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Entry
119423020 CDS
T08042
Symbol
dmxl2
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119423020 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119423020 (dmxl2)
Membrane trafficking [BR:
nwh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119423020 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119423020 (dmxl2)
RAVE complex
119423020 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_HPS5
NBCH_WD40
TPR_GEMI5
Beta-prop_Vps41
Acetyltransf_13
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
119423020
NCBI-ProteinID:
XP_037546363
LinkDB
All DBs
Position
2:complement(13677464..13744411)
Genome browser
AA seq
3064 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDVPFTAYGSGCDVVILACDFDCVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPLSTNPNKRHKQLNYQWQKTGQFFLDAITYNLAWDP
QGNRILAATERLQLWAPPLTDALIEEEDGQMMEEKNHPVLNDWNCVWQCKTAGSVHVAKW
SPDGEYFATVGKDDCLLKVWYPTTAWRSAVVVQDPSDKKPPLVHFSFVYLAHPRSVTGMS
WRKTSKYMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSLLGGQITENSHSFSSSLPGLAG
NKDKIQHALESIHHLKQLRRGRRRSSALVAHSELLPSQLGTQDSHTHRHIAHHANALCHF
HISASINPNTDIPSTLADSTVFNPEDGSGGGGFVVHWLNNKDLSFTSSMDLFMMQLRKFT
EQQLEQTTEDPLDPEGSPMKFDFDLDEMSDKASSEHGEEADSGEQGSTKASSPGSSSSMP
LPSMLLERKMETLITEWNKSPDMLFTIHPTDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPTGDANSLSKNILMYACTLTEGESAGTGEQGRMVQRVARSASITASLGSAAVSPS
PKLRPGISPAVMMVSKHVDGSLNQWAVTFADRSGFSNVLTVSHKTRYCGHRFHLNDQSCH
TVLPLLLTSSHHNALLTPPSAPSSMDGEQLPTFPLPKGLPRKQLRNAATRTFHDPNAIYS
ELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACFV
ASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDIITNQC
GSNTQLLHVFQEDFILGYKPQKEQEAFTPAFSTGEDFQPAPFSEKFFLVVIEKDLNRNSV
LQMWHLHLQSVQACVDEPSQQFNFQSQLMVPNQATNADSSPETSPIRPLPRSASSANLQS
ASKLILSSRLVYSRRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTPCSDSYVRF
WRCAVEVDDGYDGESQDRWTYRWEPWVLMNEEDDNNSSVCVSGRPVAVSCSYIGRLAVAF
KQPRHGQLHGPGEDFSMNVSIYECESTGGSEWVLEQTVHLDDFVRPSSTLDPRVSVDSNL
FVYSRSDLYMSRDHSSPNIKHFIHLDWLSKEDGSHILTVGVGSNILMYGRISGVVSEQTS
SKEGMAVITLPLGGSIKQGIRSRWVLLRSIDLLSSVDGTPSLPVSLSWVRDGILVVGMDC
EMHVYAQWHQDKKLGEGEEGNLSSADIAGGQTTGSSVFEGRARSKSVFEGSAGVDEALRA
PAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGRVRRAKAILAHLVKCIAGEVAVVRD
VEGGEGGSRRHLSRTISVTGSTAKDTMVTGRDSGRDYTEINSIPPLPLYALMLADLDTSY
KGPEETAKVTKVSDGDATQKSTEDQYADLFQVPAVTTDDFVNFATDKPEKKSRFINLSQY
GPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTIATTSAEVTSSTDQQYTGGEA
LDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAMQ
RGDAQWSDLRAVGVGWWIRNINTLRKMVDKLGKAAFQRNNDPLDAALFYLATKKKAVLWG
LFRSQHDEKMTQFFKNNFSEDRWRKAALKNAFSLLGKQRFEQAAAFFLLAGSLKDAIEVL
MEKMEDLQLAMIVSRLYESDFEKSSTCQGLLYEKVLGCNRDGSGYHCSRLHPDPFLRSIA
YWIMKDYTRALDTLLERNPKEDENPDVMVKSCNPVVFSFYNYLRTHPLIIRRHFANPEGP
VTSVGLTAEKSSADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVSKKSGSSPLS
KASSKANINANQPLENGTRGGGDWDDPATADRAWGGNYSGGLDWSQPVVQVEEDELNLDW
GDDKDDDDDEDGEGLTMKKPEQETRAGSKNGVSKLQRQDSQGESEVDVIAEQLKFRACLK
ILMTELRTLATGFEVDGGKLRFQLYSWLEKEIAAMHTICNYKVEGKEEGSEVERDRTASI
DISEDALECSEAGAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYCSLHGAKG
GGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIAPTKTVIANPVLHLSNH
IHDILYTITSMETPPHPDIIDDRVNALHTLAASLSACVYQALCDSHSYSSQTEANQFTGM
VYQGLLLSERKRLRTESIEEHVTPNSAPAQWPGVSSLISLLTSAREEDQPRLSVLLFEAV
VAVYLSLLIHGLGTHNSNELFRLAAHPLNNRMWAAVFGGGAKVVIKPKRPELPPATPPQP
PAEDVDRYRRRFNMRMLVTRQSVKETPATPPPVPTERPTYKEKFIPPELSMWDYFVAKPF
LPLSDSNALYDSDESGAEDDEDDDAFLSDTQITEHSDPNSYSWALVRLVMVKLAHHYAKN
FIPLTGLDFTDLPVTSPLSNAVFKTLENWEQLLLERMNKFDGPPPNYINTYPTDLSTGAG
PAILRHKAMLEPDNTPFKNKNHQSFPVRRLWHFLVKQEVLQETLIRYIFTKKRKQSESLE
NHVDRVNPNCIAGASSPYKVEADLGYPGGKAKIIHKESDIIMAFAINKANSNEIVLASTH
DVQEVDVSTLVAVQPYTWIEDFDKESRSSDDIDPRSSQTNIAQASSVSFAPPQMAVSASM
PWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQ
AGNARVTRLYFNSQGNKVHTHTQTSTHTHNGLHGWVYLFXLFEMILLTSSYCWQSWQCHS
KACSDFTFITSSSLIATAGQSNDNRNVCLWDTLISPSNTMVHAFPCHENGATVLQYAQKQ
QLLISGGRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDPYEDFFVTGSAEGNMKVWKLA
GHGLMHSFSNEHAKQSIFRNIGSGVMKVETLPGNRIFTCGADGTLKMRVLPDRYNIPSSL
INIL
NT seq
9195 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtgctgactggagccgtgaaccccggggactgctgctactcggtg
gggagcgtgaacgacgttcccttcacggcctacggctcagggtgtgacgtggtgatcctg
gcgtgtgactttgactgtgttcagatcatcccaggagctcagaatggaaacatacaggtg
ggctgcgtggagtgctcccaccagctgggcaggattgctgcatcttacggaaacacagtc
tgcatcttcgaacctctttctaccaacccaaataaacgccacaagcaactaaactatcag
tggcaaaagacaggacagttctttcttgatgccatcacctacaacctggcctgggaccca
caagggaaccgtatcctggcagcgaccgagcggctccagctgtgggctcctccactgaca
gatgccctgatagaagaggaggatgggcagatgatggaggagaaaaaccatcctgtccta
aatgactggaactgtgtctggcagtgcaagacagccggctctgttcacgttgccaagtgg
tctcctgatggggagtactttgcaacagttggaaaggatgactgcttacttaaagtgtgg
tatcccaccacggcctggcgctctgctgtggtggtccaggacccgtctgataaaaagcct
cctcttgttcacttctctttcgtttatttggcccatcctcgctcggtcaccggcatgtcc
tggaggaagaccagcaagtacatgccgaagggttctgtgtgtaatgttctgctgacttcc
tgcgaggacggcgtatgcaggttgtggtctgaaaccctcttaccagaggacagtctgctg
ggtggacagatcactgagaactcgcactctttcagctccagcctgccaggcctggcagga
aacaaagacaagatccagcatgctttggagtcgatccaccacctgaagcagctgcgacgg
gggcgacggcggtcctcggctctggtggctcacagcgagctgctgccgtcccagctcggc
acccaggactctcacacccaccgtcacatcgctcaccacgccaacgccctgtgtcacttc
cacatctcagccagtattaaccccaacacagatatcccatcaacgctcgccgactctaca
gtatttaacccagaggacggctctggtgggggtggctttgtggttcattggctcaacaat
aaggacctcagctttacttcttccatggacctctttatgatgcagctccgcaagttcaca
gaacagcagctggaacagaccaccgaggaccctctggatcctgaagggtcccccatgaag
ttcgactttgacctagatgagatgtctgacaaagcatcctcggagcacggagaagaggcg
gattcaggggagcagggaagcaccaaggcgtcctctcctgggtccagctccagtatgcct
ttaccgtccatgctgctggaaaggaagatggagactttgatcacagagtggaacaagagc
cctgacatgctgttcaccatacaccccaccgatggttccttcctggtttggcacgtgaag
tacctggatgagttcaaccagggaatattcagacaagttcaggtgtccttttcctcgcgc
attcccgtagcgtttcctacgggtgacgccaactctctgagtaaaaacatcctgatgtac
gcctgcactctgactgagggcgagagcgctgggacaggtgaacagggacggatggtccaa
cgtgtcgcccgctccgcctccatcacagccagtctgggttctgctgccgtgtccccatcg
cctaaactccggcccggcattagtcctgctgtcatgatggtctccaaacacgtggacgga
tctctgaaccagtgggccgtcacgtttgctgaccgttctggcttctccaacgttctgacc
gtatcgcacaagacccggtactgcggccatcgtttccacctgaacgaccagtcttgccac
acggttctgccgctgctgctcacctcctctcaccacaacgccctgctcacgcccccctcg
gcccccagcagcatggatggcgagcagctcccaacctttcctctacctaaaggacttccc
aggaaacagcttcgtaatgcagctacaaggacctttcatgaccccaatgctatttatagc
gagctgattctgtggcgcgttgaccacatcggacctttgtcttgcactggaggggtctct
gaactggcccggatcaactctttgcacacatctgccttcagcaatgtggcctggctgcct
actctggtgcccagctctgttctcggaacctactgtaacagtgccagcgcctgcttcgtg
gcatcagatggtaaaaacctgcgtctctatcaagctgttgttgatgccaggaaactgctg
gatgagctgtcagatccggaaacatctaaactcgtaggtgaagtgttcaacattgtgagc
cagcagtccactgccagacctggatgcatcatagagttggacatcatcacaaaccagtgt
ggctccaatactcagctgctgcacgtcttccaagaggattttattttaggctacaaacct
caaaaagaacaagaggcattcacaccagccttttccaccggagaagattttcaacctgct
ccgttttctgagaagttcttcctggtggtgatagagaaggatctgaacaggaactctgtc
ctgcagatgtggcacctgcacctccagtctgtgcaggcgtgtgttgatgagccaagccaa
cagtttaacttccagagtcagctgatggttcctaatcaagccacaaatgctgactcttct
ccggagacttctcccatcagacccctgccacgctcagcttcttcagctaaccttcagtca
gcgagtaaattgatcctcagctccaggctggtgtacagcaggcggctggacttaccccat
ggggtggaggttacgagagctacaccttcagcaggtcacctgagttcctcctccatctac
cctgtgtgccttgctccgtacctgatcgtcaccccctgctccgattcttacgtgcggttc
tggcgctgcgccgtggaggttgatgatggctatgatggagagagccaagacaggtggacg
taccgctgggaaccctgggtgctgatgaacgaggaggacgacaacaacagttctgtgtgc
gtgtcaggtcgacccgtagctgtgtcctgctcctacatcggccggctggctgtagccttt
aaacagccacgtcatggacagctgcatggtcctggagaggacttctccatgaatgtgtcc
atctatgagtgtgaatctaccggtggctcagagtgggttttggagcaaactgtccacctt
gacgacttcgtcagaccctcatcaactctggatcccagagtcagtgtggattccaacctg
tttgtctacagcaggtctgacctgtacatgagcagagaccacagctcccccaacattaag
cactttatccacctggactggctgtccaaggaggacggttctcatatcctcactgttggg
gtgggctcgaacatcctcatgtacggacgcatctcgggggtggtcagtgagcagaccagc
agtaaggaggggatggccgtcatcacccttcctctagggggcagtatcaagcaagggatc
cgttcacgctgggttctgctgcggtccattgacctcttgtcttctgtggatggtactccg
tcactcccggtctccctgtcttgggtgagggatggaatcctagtggtgggtatggactgt
gaaatgcacgtgtacgcccagtggcaccaggacaagaagctcggtgagggagaagagggc
aacctgtcgtctgcagacatcgctggaggtcaaaccacaggttcctctgtctttgaaggg
agagctcggtctaagagtgtgtttgaagggagtgctggggtggatgaagccctccgagcc
ccagcaggactacaggaaggtggactgttcgaagcggctcactccctgtccccaactcta
ccacagtaccatccaactcagctgctggagctcatggacctgggccgagttcgccgggcc
aaggccatccttgcacacctggtgaagtgtatcgctggagaggtggccgtggtgagagat
gtggaggggggcgaaggcggatccaggagacatctttctcggaccattagcgtgactggc
agcacagcgaaggacacgatggtgaccggccgcgacagtggcagggactacacagagatc
aactccatccctcctttacctctctacgctctcatgttggctgatctggacacctcatac
aaggggccagaagaaaccgccaaagtgaccaaggtgtctgatggcgacgcaacccagaag
tccacagaggaccagtatgctgacctctttcaggtgccagcggtcaccactgatgacttt
gtgaactttgctactgataaaccagagaagaaatccagatttattaacctctcccagtat
ggacccacttactttggaccagagcacgcccaggttctgtccagtcatctgatgcactcc
agccttccaggactgacgaggctcgagcagatgttcctggtggctttagcagacaccatc
gcaaccaccagtgctgaggtgaccagctccacggatcaacagtacacaggtggcgaggct
ctggatgagtgtggactgaggtacctgctcgccatgcggcttcacacctgcctgctcacc
tctctgcccccactttaccgcatgcagctgcttcaccagggcctttccacgtgccatttt
gcgtgggccttccattcggaggcggaggaggagctgctgaacatgattcctgccatgcag
agaggcgacgcgcagtggtccgacctcagagccgtcggcgtgggctggtggatccgcaac
atcaacactctgcgcaaaatggtggacaagttgggtaaagctgctttccagaggaacaat
gaccctttagatgctgctctcttctacttggccacaaagaagaaagccgtcctgtgggga
ctcttcaggtctcagcatgatgagaagatgactcagttctttaaaaacaacttcagtgag
gaccgctggagaaaggcggctctgaaaaatgccttctctctgctgggaaagcagcgcttc
gaacaggccgctgcctttttcctgttggctggttcccttaaagacgccatagaggtgttg
atggagaaaatggaggatctccagctggccatgatcgtatccagactgtacgaatcagac
tttgagaagtcgtccacctgccagggcctcctttatgagaaggttctgggttgtaacagg
gacggcagtggttaccactgctcgagactgcaccctgacccgttcctccgcagcattgcc
tactggatcatgaaggattacactcgagccctggataccctgttggagaggaaccccaaa
gaggacgagaatcctgacgtgatggtgaagtcttgcaaccccgtggtgtttagtttctac
aactacttgagaacccatcctttgattattcggcgccactttgctaatccagagggtcca
gtaacaagtgtgggtctgactgcagagaagagcagcgccgatgagatcaacctcatcgag
cgcaaactcttcttcacgactgccaacgcacacttcaaggtggggtgtccagttttggct
ctggaagtgctttccaaaattcccaaagtcagtaagaaatctggatcatcgcctctcagc
aaagcttcatcgaaggcgaacatcaacgcaaaccagccgttagaaaacggcacccgggga
ggcggcgactgggacgacccggcaacagctgaccgtgcctggggaggaaactacagcggg
gggcttgactggagccagccggtggtccaggtagaggaagacgagctgaatctagactgg
ggagatgataaagatgatgatgatgatgaagatggagaaggcttgaccatgaagaaaccg
gagcaggaaaccagagcaggctcgaagaacggcgtctccaaactgcagagacaggactca
cagggtgagtcagaagtggacgtcatagcagagcagctgaaatttcgtgcctgtctgaag
atcctgatgaccgagcttcggacgctggcgacgggcttcgaagtcgacggagggaagctg
cggtttcagctctacagctggttggagaaggagattgccgcaatgcacacgatctgtaac
tacaaggtggagggaaaggaggagggatcagaggtggagcgagaccgaacagcttctata
gacatttcagaggatgcactggagtgctccgaggcaggagcgtacgagcgtcaccagatg
gagcgtcggcgtcttcaggccaagcagcagcattcagagaggcgtaaggcctggctgagg
aagaaccaggccctgctgagggttttcctgtcctactgcagccttcacggagccaaggga
gggggggtgacgtctgttcgcatggagcttctgttcctcctgcaggagagccagcaggag
accacggtgaagcagctgcagtctcctcttcctctgcccacgacgctgcctctgctgtcg
gcctgcatcgcccccaccaagacagtcatagccaaccctgttctccacctcagcaaccac
atccatgacatcctctacaccatcacaagcatggagacgccgccacatcctgacatcatc
gatgatcgggtcaacgccctgcacacactggcagcctctctgtctgcttgtgtctatcag
gcgctgtgcgacagccacagctacagcagtcagacagaggccaaccagtttacagggatg
gtgtaccagggcctgcttctcagtgagaggaagcggctgaggacggaaagtatcgaggaa
cacgtaactcccaactctgctcctgctcagtggccaggtgtgtcgtccctgatctcactg
ttgacgtctgcgcgggaggaggaccagccgcggctcagcgtgcttctgttcgaagcggtc
gtggccgtttatctctcgctgctcatccacggtctgggcacgcacaacagcaacgagctc
ttccgcctggcagcgcaccccctcaataaccgcatgtgggctgctgtgtttggaggcggt
gctaaagtcgtcatcaaacccaaaagaccagagctcccaccagcgaccccccctcagccc
ccagcagaagacgtggatcgttacagacgtaggttcaacatgaggatgctggttactagg
caatctgtgaaggagacccccgccaccccgccccccgtgcccacagagagacccacctac
aaggagaagttcattcccccggagctcagcatgtgggattattttgtagctaaacctttc
ctgccgctgtcggacagcaacgccttgtacgattcagatgaaagtggagctgaggatgat
gaagatgacgacgccttcctctctgacacacagataacggagcattctgatcccaactcc
tacagctgggctttggtccgactggtcatggtgaaactggctcatcactacgccaagaac
ttcatccctctcactggtcttgacttcacagaccttccagtcacttctcctctcagcaac
gctgtttttaagactttagagaactgggagcagcttctgttggagcggatgaacaagttt
gacggtccacctcccaattacatcaacacctaccccactgacctgagcacaggagccgga
cccgccatcctgagacacaaggccatgctggaaccagacaacacaccgttcaagaataag
aaccatcagtcctttccagttcgacgtctttggcatttcctggtcaaacaggaagttctt
caggaaacgctgatccgttacatcttcactaagaaaagaaagcagagtgagtctttagaa
aaccatgtggaccgtgtaaacccaaactgcatagctggagctagcagtccctataaggtt
gaggcagatctgggctaccctggaggaaaggctaagatcatccacaaggagtctgatatc
attatggcatttgccatcaataaggcgaactccaacgagatcgtgttggcctccacccat
gacgtccaggaggtggatgtctccacgttagtggctgtccagccctacacttggatagaa
gactttgataaggagtctcgaagctcggacgacatcgaccctcgttcctctcaaaccaac
atcgcccaggccagctccgtttcctttgctccgcctcagatggcggtctctgcgtccatg
ccgtggctcgggagcggtcagaccagcatgggggccagcgtgattatgaagagaaattta
aacaacgtgaagaggatgacgtctcatcctatatatcagtattacatgacgggcgctcag
gacggcagtgtcaggatgtttgagtggaacagacctcagcaactcatttgcttcagacaa
gcgggcaacgctcgagtcacccggctctattttaactcccaaggcaataaggtacacaca
catacacaaacatccacacacacacacaacgggctccatggttgggtctacttgttctga
ttatttgagatgatcttactgacttcctcttattgctggcagagctggcagtgtcattct
aaggcctgcagcgacttcaccttcatcacgtcctccagcctgatcgccacagccggacag
tccaacgacaacagaaacgtgtgcctgtgggataccctgatttctcccagcaacaccatg
gtccacgcgttcccctgccacgagaacggagccacagtgcttcagtatgctcagaagcag
cagctgctgatctctggaggcaggaagggctttgtgtgtgtgtttgacatccgccagagg
cagctgctgcacaccttccaggcccatgactctgccatcaaggccctggctctggacccc
tacgaggacttttttgtcactggctctgcagagggcaacatgaaggtctggaagctcgcg
ggccacggcctcatgcactcgttcagcaacgaacacgccaagcagtccatcttccgtaac
atcggttccggcgtgatgaaggtggagactcttcccgggaaccggatcttcacctgcgga
gcagacggcaccctgaagatgagggtcctgccggaccgctacaatattcccagcagctta
atcaacatcctgtaa
DBGET
integrated database retrieval system
