Nematolebias whitei (Rio pearlfish): 119423154
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Entry
119423154 CDS
T08042
Symbol
si:ch211-79m20.1
Name
(RefSeq) alpha-protein kinase 1
KO
K17386
platelet-derived growth factor subunit B
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04010
MAPK signaling pathway
nwh04020
Calcium signaling pathway
nwh04510
Focal adhesion
nwh04540
Gap junction
nwh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119423154 (si:ch211-79m20.1)
04020 Calcium signaling pathway
119423154 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119423154 (si:ch211-79m20.1)
04540 Gap junction
119423154 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
119423154 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
nwh04052
]
119423154 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119423154 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
nwh04052
]
Cytokines
Growth factors (RTK binding)
119423154 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Heparan sulfate / Heparin
Growth factors/receptors
119423154 (si:ch211-79m20.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
119423154
NCBI-ProteinID:
XP_037546495
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All DBs
Position
16:22079347..22091021
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AA seq
603 aa
AA seq
DB search
MRATGGVCGQTDRERGDPLPPSLIDLLRDSPISSVEDLELLLLQQESNANEDEEDEHDTL
PNPAHARYVRSLAEAQTAQQAACKTRTEVMEVTRSMLDRRNANFLLWPSCVEVQRCSGCC
NTRTLQCVPTVTSTRYLKVIKLQYINQKAHYETAIISVEDHVTCTFQTSSSSSSSSTISI
PRSPNQSNPNPFPSPPMKTPPSSYVPVSPPRPIHPASPRTHTSKADLHRHDDLKHNQQHY
HPQEHEPTVRQWQQGSYTQLVRWTQPRVHQAPTHVQTNVHQTETGSLRSVSSWPSEAKAE
HAVMGSTQQAGHGSGYDRSHEETGGEEVHHHDHEQRQQQLLQHQQSLQHQYNQQPQYPQQ
HNYRGEEDQEQHWLNAPQSDSASPSAVLTQPPKLEGNPTPFPSIIQKDSVTNQQFTEVTK
TKLTETEKASQQEGNEREESGSDISGDLARAELANQGRRMNSEGSLTEEERRQKLLEMVQ
SEPEKTSLLHRQRHHRHQRHHRHQQRPKPNKTAISTIAPRTAAAHQTPLRPPRRRRKHRK
RMSKAAMRAKIMKLRACPLLIPTPTQPIYGTTLFEVPRGLLRGAIFDVSRQQPLIGRQGY
FTG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgacagggggtgtttgcgggcaaacagacagggagagaggcgatccgctccct
ccgtccctgattgatctactaagagactctcccatctcctcagtagaagacctggagctg
ctgctgctgcaacaagagtcaaacgcaaatgaagatgaagaggatgagcatgatactctt
ccaaacccggcccatgcccgatacgtcagaagtcttgctgaagcacagacagctcagcag
gcagcctgtaaaactcgaacagaggtaatggaagtgacaagatccatgctggatcgccgc
aatgccaacttcctgctgtggccgtcgtgtgtggaggtgcagcgatgttcaggctgctgc
aacaccaggacgctgcagtgtgtccccacagtgacctccaccagatacctgaaggtcata
aagctccagtacataaaccagaaagcccactatgaaacagccatcatctcagtggaagat
catgtcacatgtacgttccaaacgtcctcctcatcttcatcttcttcaaccatctccatc
cctcgctctccaaatcagagcaacccaaatccttttccttcccctccaatgaagactcct
ccatcctcctacgttcctgtgtcccctccccggcccattcaccctgcctcaccaaggacc
cacacctccaaggctgacctgcatcgccacgatgatctgaaacacaaccaacagcattac
catccgcaggagcacgagccgacggtgaggcagtggcagcagggcagttacactcagttg
gtgcgctggacgcagcctagagtgcatcaagcccccacgcacgtgcagacaaatgtgcac
cagacagagactgggtcgctcaggtcggtcagcagctggccatctgaagccaaagcagaa
cacgcggtgatgggaagcacacagcaagcaggacatgggagtggctacgacaggagccat
gaggagactggaggggaggaagtgcaccatcatgatcatgaacagaggcagcagcagctg
ctacagcaccagcagagcctgcagcatcagtataatcaacaaccgcagtatcctcagcag
cacaactacagaggagaggaggaccaggagcagcactggctcaacgctccccagtctgac
agcgcctctccatctgccgttctaacccagccacccaaactcgaaggaaaccccacccct
tttccatctataattcaaaaagactcagtgaccaaccaacaatttactgaggtcactaaa
accaaactgactgagactgaaaaggccagtcaacaagaggggaacgagagggaggaaagt
gggtcggacattagtggcgacttggccagggcagaactggccaatcaggggaggagaatg
aactctgaaggttctttaacagaagaggagagaagacagaaacttctagagatggtacag
agtgaaccagaaaaaacatctcttcttcatcgtcagcgccatcatcgacatcaacgtcac
caccgtcatcaacagagaccaaagccaaataaaacagcaatctctaccatagctcctagg
acggcggcagctcatcagacacctctccgacctcctcgccgcaggagaaaacaccgcaaa
cgcatgagtaaagctgctatgagagctaagataatgaagttaagggcctgcccactgttg
atacccacccccactcagcccatttatggtaccaccttgtttgaggttccaagaggacta
ctccgaggtgccatttttgacgtaagcagacagcagccattgattggccggcagggttac
ttcactggatga
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