Nematolebias whitei (Rio pearlfish): 119423160
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Entry
119423160 CDS
T08042
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119423160 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119423160 (usp38)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119423160 (usp38)
Peptidases and inhibitors [BR:
nwh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119423160 (usp38)
Ubiquitin system [BR:
nwh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119423160 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
119423160
NCBI-ProteinID:
XP_037546501
LinkDB
All DBs
Position
16:30349123..30382969
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AA seq
1019 aa
AA seq
DB search
MDKILEGLVSSDHSVPVKRAIVKKVMEAAEKEVTEEQCQALFTLTTRLILLGEDAFQKQI
GLQVLDAYARYHRPEFEHFFNKEFALSLLQQGHGQLDHRDPAIIDYIHCCLRLLISCPSV
LEIFSVIQVEVLRMVCERPQPAFCAHLCTLLSDFMQCIPRDKSGVLFCQQLVRTISCFQC
FASQERELKEYVEQVTKVSTLLQNIWKADPTTLLPSLQEVFTIISSTDPSFEPSIALASL
VQHIPVQMIVMLIKSLTTDQNVRDGCMTQALCRIIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFSRLWYPIVRQGALAVLSHMLLSFQHSPEAFHLVVPRVVDLVK
SLKTDGLPTSKAFLLQFTELMHCMVYQYSGFPDLYDHILEAIKDLPKPSEKKMLLVLNQS
AWTSQSNSFASGILRQAGKSETGKTGLINLGNTCFMNSIIQTLFMATDFKRHVLALHINA
SNTLMKKLQLLFAFLAHTQRAAYAPKTFLEASRPPWFNMGSQQDCSEYLRFLLDRMHEEE
KTLQVLESTKPKLAPLVDASSKDPTCLTSSEEHKESCLTRADSTPADDQRTLIERMFGGK
LITGIRCMQCNCISEKEEPFTDLSLAFCPSASSQNSHKSQGPSEEPKVLCQGSVNGGSEA
PEPDSASSLATSIQYEPVTNENPLSVPDLVNYFLAPEILDEDNAYFCETCGSLQRAERTL
KVVSSPEYLILTLLRFSYDAKCHIRRKILDNVTIPPALILPVHTPSTPALWPSASSSPLQ
VDSPESNENLAKKLKPSQGEEERARINEEERNRAGGTLVQSVPYLLSSVVVHSGISSESG
HYYSYGRNINGADGAQHPSCHSAVGEDLATCNLCTPVQGDIQTSSGPEAREWLLFNDSRV
TFTSLQSAQNITKRFPKDTAYVLMYRKQEQNLNRGVANGMTISTEPPLQKELLDAIIKDN
KLYLQEQELSARTQVLQASSSSCSFRPNGSDDNNPPGSCGPSGGGGGGGGFNTISRLVF
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattttggagggcctggtcagttccgatcactctgtgccagtaaaaagagcc
atcgtgaagaaggtcatggaggcagcagagaaggaggtgacagaggagcagtgtcaagcc
ttgttcacactcaccacccgtctcatcctgcttggtgaagatgctttccagaagcagatt
ggcctccaggttcttgatgcctatgcccgctaccaccggccagagtttgagcatttcttt
aataaagaatttgctctcagtttgctccagcagggccatgggcagctggaccacagagac
ccggctataatagactacattcactgctgcctgcggctgctcatcagctgcccctctgtg
ctggaaatcttcagtgtgatccaagtggaggttttaaggatggtgtgtgaacgccctcag
cctgctttctgtgcccatctgtgcactctgctgtcagacttcatgcagtgcatcccgagg
gacaagtcgggcgttttgttctgtcagcagctcgttcggactatcagctgctttcagtgt
ttcgccagccaagagagagaactgaaagagtatgtggagcaggtaaccaaggttagcacg
ctgctgcagaacatctggaaggctgacccaaccactctgttgccttcactgcaggaagtt
ttcactatcatctcttccacagacccgtcctttgagccatccattgcattggccagtctg
gtccagcacatccctgtccagatgatcgtgatgctcatcaagagtctcaccacagaccag
aacgtccgagatggatgcatgactcaagcactctgcaggataattgactggttgtcttgg
cctttggcccaacatgttgatacctgggtgatcgctctgctgaaaggactggctgcagtt
cagaagttcactattctcatagatgtcactctgttgaaaattgaactggttttcagtcgt
ctgtggtaccccattgtgagacagggggcgctagctgtactttcccatatgctgctgagt
ttccagcactcacctgaggccttccatttggttgttccacgtgtagtggatctcgtcaag
tctctgaagacagatgggctccccaccagtaaagcttttttgctgcagtttactgagctc
atgcactgtatggtgtatcagtactctggcttccctgacctctatgaccacatattagaa
gctatcaaggatctcccgaaaccttcagaaaagaaaatgttgttggtgttgaatcaaagt
gcctggacatcccagtctaattcatttgcttctggtattttgagacaagctggaaagtct
gagacaggcaagacaggtctgatcaaccttgggaacacctgtttcatgaacagcatcatc
cagaccctcttcatggccacagattttaagaggcacgttttagccttgcatataaatgcc
tccaacactctgatgaaaaagcttcagctcctctttgctttcctcgctcacacacagagg
gcagcatacgctcccaaaacgtttttggaagcttctcgtcctccctggttcaacatgggc
tcgcagcaggattgttccgagtatctcagattccttttagacaggatgcatgaagaggaa
aaaacgcttcaggttctggaatctactaaaccaaaacttgctcctttggttgacgcaagc
agcaaagacccaacatgtctgacttcttccgaggaacacaaggagtcatgtttgactcga
gcagactctacacctgctgatgatcaaaggactttaatagaaaggatgtttggtggaaag
ctgatcacaggcattcgctgcatgcagtgcaactgcatctcagagaaagaagagcctttt
acagatttatctttggccttttgtccgtctgcctcttctcaaaacagtcataaatcccag
gggccctcagaggaacccaaagttctctgtcagggatctgtcaatggtggcagtgaagct
cctgagccagactcagccagctctctggctactagtattcaatatgagccagtaacaaat
gagaatcctctttctgtgcctgatctggtgaactattttctggctccagagatccttgat
gaagacaatgcgtacttctgtgagacgtgtggctccctccagagggcagagaggactctg
aaagtggtttcctcacctgaatacctaatcctcacactgctgcgattctcctatgatgcc
aaatgtcatatccgtaggaagattctagacaacgtcaccatcccaccagccttgatactt
cccgttcatacccctagtacacctgcactgtggccttccgcctcctcctcccctttgcaa
gtagattctcccgaaagcaacgagaatctggccaagaaactcaaaccgtcgcagggagaa
gaggagagggcgaggatcaacgaagaagagagaaacagagctggaggaacgctggttcaa
tctgtgccctatttgctaagctcagtggtggtgcattctgggatatcatcagagagcgga
cactactactcatatggtcgaaacatcaacggagcagatggagcacagcatccttcctgt
cactcagctgtcggagaggatctggccacatgtaacctctgcacacctgtacaaggtgac
atacaaacctccagtggtcctgaggcgagagagtggctgcttttcaatgacagcagggtg
acgttcacgtctttacagtcagcacagaacatcaccaaacgcttccccaaggacacagct
tatgtgctcatgtacaggaaacaggagcagaacttgaacaggggggtggcaaatgggatg
acgataagtactgagccacctcttcaaaaagaactgctggatgctattatcaaagacaac
aagctgtatttacaggagcaggagctcagtgctcgtacccaagttcttcaggcctcttcg
tcctcatgctcattcaggcccaacggttcagatgacaataacccacctggaagctgtggc
ccatctggggggggcggagggggtgggggcttcaacaccattagcagactggtgttctga
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