Nematolebias whitei (Rio pearlfish): 119423217
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Entry
119423217 CDS
T08042
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119423217 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119423217 (nup133)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119423217 (nup133)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119423217 (nup133)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119423217 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
NOPS
Motif
Other DBs
NCBI-GeneID:
119423217
NCBI-ProteinID:
XP_037546551
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All DBs
Position
16:complement(42681977..42725050)
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AA seq
1138 aa
AA seq
DB search
MFSPRTAPSPGRRQQSRTAGRRSVSAAAPGLLFSPRRTPLSARSTPSRLQSHTAAETINY
DVQTFGSSLPVKVMEALTVAEDDDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KELQLPSSDYNYTADLIAMTSSVPLEMAAVQSVSVLVVAAEGAARFWPSLAHEGNYTESD
VDLGDLCNFVVAVRGDSFVLSSVKNQLLRVCADSAGKLQCRALQQGQGMLSGIGRRVSSL
FGILSTPANDTLHSVLWVAGTSGLYTLTTSSLSKWEVEDNSEHQIFSWDTRKALTESIVD
SIWGSESNYEELKEGANVAYLDMKLSQAGLVILAAAWHQSDTPCLAYFCLITLQDRGATI
FEQFTVEVTKYSCLFQSEEALQATRFVLPWSPGSTAFLYNEELVFVCSTGTSRGALPDEK
ISFNSPGDGVRGGGCCANLPVLFSQNSGLVAVVARESASILPETMEDSLCSSLAAAPEVS
TMETSTRAEPVAQEDKTKLLKSAFLQFCRNDLLGAQAVTDELFPADSDGEEGAELDSIVT
QINLELVDDYPASDPRWAESIPEESAGFLLTSLIILHQLEDKMKAHGCFMDFLLQVGLLD
RLSQVTVRSSVMATRLLLCEHAEKLQAAVVLKNYHSKQTELVHRAISAALHRSSTPVPPS
LTAADVFFREVSQISSVFDCLLEEEERSLKENPVDSVQWAEVVLTVNNIIKDMLQAAVQY
RETKASMYRPSENAPAEPEYIPWTASGGVGGVRTIISRQHDVILGSVYPHADSELRSTLC
EQLVALLDIYLGGYVAQLTSLQKQRSSGPQQERYNSLEMEYSQRRSELLTPLLELGQYQW
VAALAEKYCDFDILVQMCEQSDNQNRLQHYMAKFAEQNFADFLFRWYMEKGKRGKLLSQP
AAQHQQLDSFLQAHQHLSWLHHIHVHNYESAHRTLDSQANMETRYFVKKKTLLALSKLTA
LASDLPEDELTKQVNDIVEQERFLLHQETLPRQLLEEKQQNPDTMPLLGAHNLIQLYICD
DNRRANEYDFKKALDLLEYIEEEDSVDIDALKCEIFVNALRRDDWSSADGNEDPLEAAKD
SIFVKILLKLIQEGVPLQTYLPDVKELLELDELSALKSKPYFEFVLRANYEHYLQAQM
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcccccgcaccgctccgagccccggccgcaggcagcagagcaggaccgccggg
aggaggagcgtctccgcggcggcccccggccttctgttctccccgcgcaggactcctctg
tcggccaggtcaacaccgagcagacttcagagccacacagctgcagaaaccatcaactat
gatgtccagacgtttgggtcgtctctgccggtcaaagtgatggaggcgctgaccgtggct
gaagatgatgaccagatctcagtgaaggtggacgagagcggctgggcctggatggtttgt
ggagagagactcatcatctggaagatctgccagactgctgtagctaagctctctgtgtgt
aaggagcttcagctgcccagcagtgactataactacacagctgatctcatcgctatgacg
tcgtccgttccactggagatggctgctgttcagtccgtctctgtactggtggtggctgca
gagggagcggctcgcttctggccgagcctggctcatgagggcaactacacagagtcagac
gtggaccttggcgacctctgtaactttgtagttgctgtcagaggcgacagctttgtcttg
tcatctgtcaagaatcagctgctgagagtgtgtgcagattctgcaggaaagctgcagtgt
cgagccctgcagcagggtcaggggatgctgtctggcatcggccggcgtgtctccagcctg
tttgggatcctttccacgccagccaacgacacgctgcacagtgttctgtgggtggcggga
accagtggcctgtacacactgaccacctccagcttgagtaaatgggaggtggaggacaac
tcggagcaccagatcttcagctgggatacccgcaaagctttgaccgagagcatcgtggat
tccatttgggggtcagagagcaactatgaggagctgaaggagggagcaaacgttgcatac
ctggacatgaagttaagccaagccggcctggtcattttggctgcagcctggcaccagtcg
gacactccctgtctggcctacttttgcctgatcaccctgcaggacaggggagccaccatc
tttgagcagtttactgtcgaggtgacaaagtacagctgtctatttcagagcgaggaggcc
ctgcaggctacccgctttgtgttgccctggtcccctggctccaccgcctttctgtacaac
gaggagctggtgttcgtctgctcaacgggcaccagcaggggagcgttgccagacgagaaa
atcagtttcaactcaccaggcgatggtgtccgtggaggaggctgctgcgccaacctgccc
gtgcttttctcccagaacagcggcctggtggcggtagtggccagagagagtgcctccatc
ctgccagagaccatggaggactcgttgtgctcgtcgctggctgcagcccctgaggtttct
accatggagacttcaaccagagcggagcctgtagcccaggaggacaagaccaaactgctc
aagtctgccttcctgcagttctgccgtaacgacctgctgggagctcaggcggtcacagac
gagctcttcccagctgacagcgatggagaggagggagctgagctggacagcattgtgact
cagatcaacctggagctggtggatgattacccagcctcagacccacgctgggccgagtcc
atcccagaggagagtgctggatttcttctgacatccctcatcatcctccaccaactggaa
gacaagatgaaggcccatggctgctttatggactttctgcttcaggtgggtctgttggac
cggctcagccaggtgactgtgcggtcgtctgtcatggcaactcgcctgctgctgtgtgag
cacgctgagaagctgcaggcagccgtggttctgaagaactaccacagcaaacagacggag
ctggttcaccgggccatcagcgcggcgcttcataggagcagcacccccgtgccgcccagc
ctcacggcagctgatgtctttttcagagaggtgtcccagatctcctctgtgtttgactgt
ctactggaagaagaggagcgcagtctaaaagagaaccccgtggactctgtgcagtgggct
gaggtggttctcacggttaacaacatcattaaggacatgcttcaggctgccgttcagtac
agagaaaccaaagcctccatgtacagaccttctgaaaatgcacctgcagagcctgagtat
atcccttggacagcatctggcggtgttggaggcgttcgcaccatcatttcccgccaacac
gatgtcatcctaggctccgtttacccacacgccgactcagagttacgcagtactctctgt
gagcagctggtagcactgctggacatatacctgggtggatacgtggcccagctgacctcc
ctacaaaagcagaggtcctcggggccccaacaggagcgctacaacagtctcgagatggag
tacagccaacggcgctcagagctgctcacgccgctgttggagcttggacagtaccagtgg
gtggcagcgctagctgagaagtactgtgactttgacatcctggttcagatgtgtgagcag
agcgacaaccagaaccgcctgcagcactacatggcaaagtttgctgagcagaactttgct
gacttcctgtttcgctggtacatggagaaggggaagagggggaagctgctgtctcagccg
gctgctcagcatcagcagctggacagcttcctgcaggcgcaccaacacctgagctggctg
caccacatccacgtccataactacgaaagtgcccacaggactctggacagccaggccaac
atggagacccgttactttgtgaagaagaagacgctgctggctctcagtaaactgacggcg
ctggcctcagacctgcccgaggacgagctcaccaaacaagtcaacgacatcgtggagcag
gaacgcttcttgctgcatcaggagactctgcccagacagctgctagaggagaagcaacaa
aaccccgacaccatgcctcttctcggtgcacacaacctcatacagctgtatatctgtgat
gacaacaggcgcgccaacgagtatgacttcaaaaaggccttggaccttctggagtacata
gaagaggaggactcggtagatattgatgcactgaagtgtgagatctttgtcaatgcgctc
aggagagacgactggtcttctgctgacgggaacgaagatcctctggaagcagctaaggac
agcatctttgttaaaatcctccttaaactcattcaagaaggtgttcctctgcagacgtac
ctgcctgatgtcaaagagctgctggagctggacgagctgagcgctctgaaatccaaacct
tactttgagtttgttcttcgagctaattatgagcattacctccaggctcagatgtga
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