Nematolebias whitei (Rio pearlfish): 119423401
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Entry
119423401 CDS
T08042
Symbol
itga3b
Name
(RefSeq) integrin alpha-3b
KO
K06482
integrin alpha 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04510
Focal adhesion
nwh04512
ECM-receptor interaction
nwh04810
Regulation of actin cytoskeleton
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119423401 (itga3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119423401 (itga3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119423401 (itga3b)
04810 Regulation of actin cytoskeleton
119423401 (itga3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwh04147
]
119423401 (itga3b)
04515 Cell adhesion molecules [BR:
nwh04515
]
119423401 (itga3b)
04090 CD molecules [BR:
nwh04090
]
119423401 (itga3b)
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119423401 (itga3b)
Cell adhesion molecules [BR:
nwh04515
]
Integrins
Integrin alpha subunits
119423401 (itga3b)
CD molecules [BR:
nwh04090
]
Proteins
119423401 (itga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Collectrin
DUF997
LYRIC
Motif
Other DBs
NCBI-GeneID:
119423401
NCBI-ProteinID:
XP_037546714
LinkDB
All DBs
Position
17:21856414..21901014
Genome browser
AA seq
1056 aa
AA seq
DB search
MLFPRALLCALLCAHHGTQSCSGFNIDERFPVIKEGKTKGSLFGFSVALHEQTKGSRKYL
LLAGAPKERAVSLQHVNETGAVYSCPITTDPADCSRMDLVSTMSSSEIVEGMWLGVTVAS
QRGHPDGRVLACGHRYVKIPQGGTEEQRRMIGKCFVRSNDLTYDISDEWQTDTYEVCNPN
NDMEGEGLCNMGISAGLTDTDVYIGSTGSYRWQGNVHVTWRNPDPLYSWDSNHKEFGILK
NRDSYIGYSTLEEQKLLSHTDYTVLTGAPRDESKGAVLFGAKTANQNVLKHVKTILGEQV
GSYFGSCLAATDLNNDDWNDLIVGAPFYFDRSKDQEGAVYIFMNENGSFQNTATVVLKGP
PSSAFGFAIAAIGDVNQDGFQDFAVGAPFHETGKVYIWSGSKKGISPEPSQVIDGKSVGN
GLFQTFGYSISGGIDMDDSSYPDILVGSLDDHIALLRARPVIHVTKTFTAEPKIVDPNQC
LPNNPCITVTVCMSFTLSNGNKDFKKNITVVYTVKADVERIRSHRVCFQDGDNTYVGSMN
LPSSKSICHTLKLKVVTPVRDKLEPVVFSVSMLLQEPIVKNRLALQNLDSFPILSQEQKL
TQRAEINFQKECGLDNKCSSNLQMTAQFADIEGNLYPRKNNIQVLQYNSGVKKISVLVDV
TNFPSPGRLAEDAHQTMLNISFSDALKYSSVKKDGIECSVDHTVICELGNPLKGNEKVSL
QIVFETYDIDLNTKQIEAQLILSTVSEQSDLQPVSLAMLIESTISPTFTIKNHLKQTTFG
GTVKGEFAMKNTSDVGSLVEFTFNVGINQPLGDMGTLAVEFQWPFEVANGKWLLYLTKIV
VTGESEMECKPAGKVVNELNLTLSGSKSKRSKRQAGDDDAEETIQHRTVEPQAAVTLLRP
LKKSYLLDCSKGTANCVTFTCPLLNMSTSAMIYVRSRLWNSTMLEDYSNALRVTVTGQAT
LKLITDKPTIKMDNQTFSFMVEIEPEEEVETPYELPLWIIISSAVAGIVLLGIIILILWK
CGFFQRASRREMYEAKAQKAEMKIQPSETERLTEDY
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttccacgagcgctcctgtgcgcgctgctgtgcgcgcaccacgggactcagagc
tgcagcggatttaacatagatgaacgctttcctgtgatcaaagaggggaaaactaaaggc
agcttgttcggcttctctgtagctctgcacgagcagaccaagggctccagaaagtacctg
cttcttgcaggagcacccaaagaaagagccgtttctctacaacatgtcaatgaaacaggt
gcagtttactcctgtcccatcaccacagaccctgcagactgctccaggatggatctggtc
agcacaatgagttcatctgagatagtggaaggcatgtggttgggcgtgacggtggccagt
cagaggggtcatccagacggacgcgtcttggcatgtgggcatcggtacgtgaagatcccc
caaggaggcacagaggagcagaggcggatgataggaaagtgtttcgtgagaagtaacgac
ctgacctatgacatcagtgatgagtggcaaactgatacgtatgaagtctgtaaccccaat
aatgatatggagggggagggcttatgcaacatgggcatctcagctggcctgacggacact
gacgtctacatcggctctacgggaagctacaggtggcaaggaaacgttcacgtaacctgg
agaaatccagatccattgtactcctgggactctaatcataaagagtttggaattttaaaa
aatcgagacagttatattggttattccactcttgaagagcagaagctgctgagccacacc
gactacacagtgctgacgggggctccgagggacgagtccaaaggcgcggtgttgtttgga
gcaaaaactgcaaatcagaatgttttgaaacatgtaaaaaccatcctcggtgaacaagtg
ggctcgtactttggcagctgcttggctgccactgacctcaacaatgacgactggaacgac
ttgatcgtgggcgcccctttttactttgatcgcagtaaggatcaggaaggagctgtgtac
attttcatgaatgaaaacggatccttccaaaatacagccaccgtggtgctgaagggtcca
ccttcttctgcgtttggctttgcaattgctgccatcggtgatgtcaaccaggatggattc
caagattttgcagtaggagcaccattccatgaaacaggaaaggtctacatttggtcggga
agtaaaaagggaatttcaccagagcccagtcaggtgattgacggtaagtcagtaggaaat
gggctgttccagacctttggctactccattagtggaggaatagacatggatgacagcagc
taccctgacatcctagttggctctctggatgaccatatagcccttctaagagcccggccg
gtcattcacgtaactaaaaccttcacagctgagcccaagattgtggatcccaatcagtgt
cttccaaataatccatgcatcaccgtcaccgtatgcatgtcgttcacgctaagcaatggg
aacaaagacttcaagaaaaatatcactgtggtgtacactgtgaaggctgacgtggagaga
ataagaagccatcgtgtttgtttccaagacggtgacaatacgtatgttggttctatgaac
ctaccatcctctaaatccatctgccatactctaaaactgaaagtggtgacacctgtgaga
gataaactggaaccggtggtgttctctgtcagcatgttgctacaagaaccaattgtgaaa
aacagactcgccctgcagaacctggactccttcccaattctgagtcaggagcagaaactc
actcaaagagcagagataaactttcagaaggagtgcggcttagacaacaaatgctccagt
aacctgcagatgacggctcagtttgctgatattgagggaaatctttatcccaggaagaac
aacattcaagtgctccagtacaacagcggtgtgaagaaaataagcgtgttggtggatgtg
accaactttccttctcctgggaggctggcggaggacgcccaccagacgatgctcaacatc
tccttctctgatgccttgaaatactcttcagtcaaaaaagatggcatagaatgcagcgtt
gatcatacagtcatttgtgagttggggaatccacttaaaggcaacgaaaaggtgtctttg
cagatagtgtttgagacctacgacattgacctgaacacaaagcaaatagaagctcagctg
attctgtcaactgttagtgagcagagtgacctgcagcctgtgtcgttggccatgctgatc
gaaagcaccatttcacccacctttaccattaaaaatcatttaaagcaaacaacatttggt
gggacagtgaagggcgagtttgctatgaagaacaccagtgacgtgggcagtctggtggag
ttcaccttcaatgtgggcataaaccaaccactgggagacatggggactcttgctgtggag
tttcagtggccgtttgaggttgccaatggcaagtggctgctgtacctgacgaagattgtt
gttacaggagaatcagagatggaatgtaaacctgctggaaaagtcgtcaatgaactgaac
ctaactttatcaggaagcaaatccaaacgcagcaaacggcaggctggagacgatgatgca
gaagaaacaatccagcatcgtactgttgagccacaggcagcagtcacactgctcagacct
ctcaaaaagtcctacctgttggattgctccaaagggacagccaactgtgtgacgtttacc
tgtcccctgctcaacatgtctacttcagccatgatctacgttcggtcacggctgtggaac
agtacgatgctggaggactattccaatgctctgagagttacagtcactggtcaagccaca
ttgaagctcatcacagataaaccaaccatcaagatggacaaccagaccttcagtttcatg
gtagagatagaaccagaggaggaggtggagacaccctatgagcttccactgtggatcatc
atatcttcagctgtagcaggaattgtgctactaggaatcataattctcatactgtggaag
tgtggcttcttccagagggctagcaggagggaaatgtatgaagccaaggcccagaaagcc
gagatgaagatccagccctctgagacagagaggctgactgaggactactaa
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integrated database retrieval system
