Nematolebias whitei (Rio pearlfish): 119423430
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Entry
119423430 CDS
T08042
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119423430 (rhbdl1)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
119423430 (rhbdl1)
Peptidases and inhibitors [BR:
nwh01002
]
Serine peptidases
Family S54: Rhomboid family
119423430 (rhbdl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580_M
DUF5580
Motif
Other DBs
NCBI-GeneID:
119423430
NCBI-ProteinID:
XP_037546748
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All DBs
Position
17:complement(23139232..23211052)
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AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPENTGFIPVENFTSLVEHHELQLDPSKLDMLLALVQSNEEGQVCY
QELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGLYKRFVRYVAYEILPCETDRRW
YFHQSRLCPPPVFIAVVTIVQIIVFMCYGIMLNKWVLQTYQPDFMKSPLVYHPGHRAQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVLAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLSGAVVGISMGLLILRSYEESLQKQCSWWVIVFSFITFLLFAIFWNIFA
YELLEVQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctccctgtttcagctcatacaagagcagttggacccagagaacaccggt
ttcatcccagtggagaacttcaccagtctggtggagcaccatgagctgcagctggacccg
tccaagttggacatgttgttagctcttgtccagagcaatgaagagggacaggtgtgctac
caggagctcatcgagctgatgagcagcaaacgctccagcagcttccggcgggccatcgcc
aacggccgccgaacgctgcagagggagatcctgctggacgagacggggctcgggctctac
aaacgtttcgtccgctacgtggcctacgagatcctgccttgcgagacagaccgacgctgg
tacttccaccagagccgcctgtgtcccccgcctgtcttcattgccgtcgtcaccatcgtc
cagattattgtgttcatgtgttatggcatcatgctcaacaagtgggtcctgcagacgtac
cagccggacttcatgaagagcccgctggtctaccaccccggtcatagagcacaagtctgg
cgtttcttcagctacatgttcatgcatgttggtttagaacagttggggtttaatgcttta
ctgcagctgatgatcggcgttcctctggagatggtccacggcatcttacgaataagttta
ctctacatggcaggagttctggctggctcgctgacggtgtccatcacagacatgcgtgct
ccagtggtggggggttcggggggtgtctacgccctgtgttcggcgcatctggccaacgtt
gtcatgaactgggctgggatgcgctgtccgtacaagctgctccgcatgattctggcgcta
gtttgcatgagctcggaggtgggccgtgcagtctggctccgcttctcaccaccactgccc
tcctcgggcccccagcccagcttcatggcccacctgtcgggggccgtggtcggcatcagc
atggggctgctgatcctgcgcagctatgaggagagtctgcagaagcagtgctcctggtgg
gtcattgtcttctccttcatcaccttcctcctctttgccatcttttggaacatcttcgca
tatgagcttctggaggtgcagataccacctcccccctga
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