Nematolebias whitei (Rio pearlfish): 119423508
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Entry
119423508 CDS
T08042
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04510
Focal adhesion
nwh04517
IgSF CAM signaling
nwh04518
Integrin signaling
nwh04519
Cadherin signaling
nwh04520
Adherens junction
nwh04810
Regulation of actin cytoskeleton
nwh04820
Cytoskeleton in muscle cells
nwh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119423508
04518 Integrin signaling
119423508
04519 Cadherin signaling
119423508
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119423508
04520 Adherens junction
119423508
09142 Cell motility
04820 Cytoskeleton in muscle cells
119423508
04810 Regulation of actin cytoskeleton
119423508
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119423508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119423508
04147 Exosome [BR:
nwh04147
]
119423508
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119423508
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119423508
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Talin_R4
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
119423508
NCBI-ProteinID:
XP_037546833
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All DBs
Position
17:29649693..29679153
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AA seq
999 aa
AA seq
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MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLSAPVAAVQAAVSNLVRVGKE
TVQTTEDQLMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKMAQAKNWLRDPNAPPGDAGEQAIR
QILDEAGKVGELCAGKERRDILGTAKTLGGMTDHVSDMRARGQGASPAAMQKAQQVSQGL
DVLTGKVQNAARKLEAMTNSKQAIAKRIDAAQSWLADPNGGPEGEENIRGLLAEARKIAD
MCEDPKERDEILRSVGELAAMTAKLSELRRQGKGDTPEARALAKQIATALQNLQSKTNKA
VANSRPAKAAVHLEGKTEQAQRWIDNPTMDDSGDLKGKMQEAMTQEVSDIFSDTTTPIKL
LAVAATAPLDAPNRDELFEDRAANFENHANRLGATAEKAAAVGTANKNTVEGIQAAVKST
RDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASED
AIKKDLDKCRMAMTNHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREVVKAASD
ELSQTISPMVMNAKAVAGNIQDPSLQKGFLDSGYKILSAVSKVREAFQPQEPDFPPPPPP
ELDQLSLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEHKAGDIVNEPMMVAARQLHD
EAGKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKSSDEVTRLAKE
VAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATEMLVHNA
QNLMQSVKETVREAEAASIKIRTDAGFTLHWIRKTPWYQ
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacgaagacgatagaaagtatcctggagccggtggctcagcagata
tcccatctggtgataatgcacgaagaaggtgaagtggacgggaaggctatcccagatctg
tcggcgccagtggctgccgtccaggcggccgttagtaaccttgttcgggttggaaaggag
accgtacaaaccacagaagaccagctcatgaaaagggacatgccaccagcttttatcaag
gtggagaatgcgtgcacaaagctggtgcaggctgcctccatgctgaaagctgatccatac
tccgttcctgctcgggattacctcatcgacgggtctcggggcatcctgtccggtacttct
gacctgctcttgacctttgatgaagcagaggtccgcaaaataatccgtgtgtgcaaaggc
attctggagtatctgacagtggcggaggttgtggagaccatggaggacttgatcacctac
acaaagaacttgggaccaggtatgacaaagatggcgaagatgatagatgagcgacagcag
gagcttacccatcaggagcatcgtgtgatgctggtcaattctatgaacacagtcaaagag
ctactccccatcctcatctcaggtataaaaatctttgtaacaactaagacgtcagggagc
cagggtgtggaggaggccttaaagaaccggaactttacttttgagaagatgagcgctgag
attaatgagatcatccgagtcctgcagcttacatcctgggatgaagatgcctgggccaac
aaggacacagaagccatgaagagagctctggggttgattgattcaaagatggctcaggct
aaaaactggctgagggatccaaacgctccaccaggagatgctggcgagcaggccatccga
cagatcctggatgaagcggggaaagttggtgaactttgtgctgggaaggagcgcagagat
attctgggcacagctaagactctgggtgggatgacggaccatgtttctgacatgagagcc
agaggtcaaggagcatccccagccgccatgcagaaggctcagcaggtttcccagggactc
gatgtgctcacgggcaaggtgcaaaatgctgctcgcaaactggaggccatgactaactcc
aagcaggccatcgccaaaaggatcgacgctgcacaaagctggctcgcagaccccaacggc
ggccccgagggagaggagaacatcagaggcctccttgctgaggccagaaagatcgcagat
atgtgtgaggaccctaaagaacgagatgagattttgcgctcagttggagagctggccgcc
atgacggccaagctatctgagctgagaagacagggtaaaggtgacacacctgaggccagg
gctttagccaagcagatagcaacagccctgcagaacctgcagtccaagaccaacaaggct
gtggccaatagcagacctgcaaaggcagccgttcacttagaggggaagactgaacaggcg
cagcgctggattgacaaccccaccatggacgacagtggtgacctgaaaggaaagatgcag
gaggcgatgactcaggaagtgtctgacatcttcagtgacacgacaacccccatcaaatta
ctggcagtggctgctactgcccccctggatgcccccaacagagatgagctttttgaagac
agagctgccaactttgagaaccacgccaacagactcggtgccacagcagagaaggctgct
gctgtcggcacagccaacaagaacacagtggagggaatccaggccgccgtcaagtcaaca
agagacttaacaccacaagtggtttctgctgctcgtattctgctgagaaaccccggtaac
caagcagcctatgaacattttgagacaatgaagaatcagtggattgacaatgtggagaaa
atgacgggtttggtggatgaagccatcgacaccaaatctctgctggacgcctccgaggac
gccataaagaaggacctggataaatgtcgtatggccatgaccaatcaccagcctcagatg
ctggtagctggtgccaccagtatcgcccgcagagccaaccgtatcctcttggtggcaaaa
cgtgaggtggaaaattcagaagatcctaaattcagagaggtggtgaaggcggcgtcagat
gaactgagccagactatttctcccatggtcatgaacgcaaaggctgtggctggaaatata
caggatccaagtcttcagaaaggctttctggactcgggctataagattctcagtgctgta
tcaaaggtcagggaagccttccaaccccaggaaccagacttcccaccaccacctcctcct
gaactggaccagctgagtctgaacgacgaagcagcacctcctaagcctcctcttccagaa
ggtgaagttcctcctcccaggcctcctcctccagaagaaaaagatgaggaattccctgaa
cacaaggctggcgacatagttaatgagccgatgatggtggctgccaggcagctgcacgat
gaagccggcaaatggtccagcaaaggaaacgacatcattggtgctgccaaacgaatggcc
ctgctcatggcggagatgtcacgtttggtgcgtggtggcagtggaaacaagcgcgcccta
atccagtgcgccaaggacatcgcaaagtcttccgatgaggtcacacggctggctaaggag
gtggctaagcagtgtactgacaaacgtatccggaccaacctgctccaggtgtgtgagcgc
attcccaccatcagcactcagctaaaaatcctgtctacggtgaaggccaccatgttgggt
cgaaccaatatcagcgaagaagagtcggagcaggcgaccgagatgttggtccacaatgct
cagaacctgatgcagtctgtgaaggagaccgtcagagaggccgaggcagcttctatcaag
atccgaacagacgcaggtttcaccctccactggatcagaaagaccccctggtaccagtaa
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