Nematolebias whitei (Rio pearlfish): 119423529
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Entry
119423529 CDS
T08042
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nwh04054
]
119423529
Pattern recognition receptors [BR:
nwh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119423529
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
LRR_6
SPRY
NOD2_WH
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
119423529
NCBI-ProteinID:
XP_037546854
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All DBs
Position
17:complement(33738155..33751312)
Genome browser
AA seq
1104 aa
AA seq
DB search
MHNSSSKFWVCSRVSLQWDVPRKLPEGADVGTTSETPFSVEELQLCSIHPDDELLILSEP
NRLKRDVNSSMIYSCHVPHLIMGSVSSLQATVHHFQPTFTAQSGGSVVAPSIIGSSVGSI
NISISTIQGLNDQLKESLHQNGTSSCCIQQSQNKTAQCQQKLKATLKRKCSHLHDGITTE
ANKISLDEIYTELYITEGGCGDINKEHEVRQIEKVSKRCVTQEKSIHCSRLFVLPPGGGR
HIRTVVTRGVAGIGKTVSANKFTLDWAEERANTELDFVFLLSFRELNLMRKKSMNLVELL
CEFFPETKDVEIFHNSTNKMLFILDGLDESRLLLDFNKGEILSDVTKKSSIAVIVTNLIR
GRLLPLALVWITSRPVASSQIPVEYIDLLTEVRGFDNSQKEEYFRRKISDKSLANRVIAH
VKSCRSLHIMCHIPVFCWMAANVLEKNLATKFNKETPKTLTQMYIHFLSLYADNMKKSLL
GRRKSNADSVRNNLLTLGKLAFKELEKGHLIFYESDLILNGINVSQASTFSGVYTQIFNE
EMTLCKEKMFCFVHLSIQEFFAALYVYLTFHNENTNVLVKKSSISRRLLSRESSELILYK
EAVEKALKCENGHFDIFLRFLLGLSLETNQALLKHLMTSNRTHQRTRTEIIKHIKERIKD
SQSADRCLNLFHCLNELNDHSLVEEIKGYFSSGILNNSNLSPAQWATLVFVLLTSEEELS
VFDLGNYTRSEEGLLRLLPVVKTVQVANLNACNLTVMCCEHLSNGISSSQLRELDLSNNN
LTDAGLKQLSDGLKTSKLETLRLKSCNLTEDSSDRLASVISSACCQLRFLDLTDNDIQDS
GVRIFSTGLGSPHCKLQQLVLSGCRVAEEGCTFLASALNSSQLKNLDLSFNHPGNSGLML
LTALLEDPHCTLDTLSVEQCGESRILPGPKKYTKKLTLDPNTAHRDLTLSEGNRKATRWT
KQAYPDHPERFDFWTQVLCKEGLTGRCYWETEWCGRACIGVTYRRICRKGEGHECWIGRN
DFSWGLNCNKDGYRVLHGSTNEVVPVQASSTKAGVYLDWSSGTLSFYRISCGELTLLHTF
HTTFTEPVYPGFHLAWVDSKVLLC
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcataattcttccagcaagttttgggtttgctccagggtctccctccaatgggacgtg
cccagaaaacttccagagggagcagatgttggaaccacctcagagactcctttcagtgtg
gaggagctacaactctgctccatccacccagacgacgagctgctcatcctgtctgaaccc
aaccgccttaaaagggacgttaattcatccatgatctattcttgccatgttccacatctg
atcatggggtcagtttcctcactccaagctacagttcatcacttccagcccaccttcacg
gctcagagtggcggcagcgtggtcgctccttccatcatcggctcttccgttggcagcatc
aacatcagcatatcaacaatccaaggtttaaacgatcagttgaaagaatcgctgcatcag
aatggaacaagcagttgctgcattcaacagtcccaaaataaaactgcacagtgtcaacag
aaactgaaagccactctgaagagaaagtgcagtcacttgcatgacgggataacgactgaa
gcaaataagatatcgctggatgaaatctacacggagctatacatcacagagggaggatgt
ggtgacatcaacaaagagcatgaagtgagacagattgagaaggtgtcaaagagatgtgta
acccaggagaaatcgatccactgcagccgattgtttgttcttccacctggaggagggagg
cacataagaactgtggtcacaagaggagtcgctggtattggaaaaactgtgtcagccaat
aaattcactttagactgggcagaggagagggcaaacacagagctggattttgtattcctg
ctctctttccgagagctgaacttgatgagaaagaaatccatgaatcttgtggagctcctc
tgcgagtttttccccgaaactaaagacgtagaaatctttcacaactcaacaaacaaaatg
ctctttatcctggatggtctggatgagagtcgtctgctcttggacttcaacaaaggggaa
atattatcagatgtgacaaagaaaagttcaattgcagtcattgtcaccaacttgatcaga
ggaagactgcttccgttggctctagtttggatcacgtctcgcccagttgcctccagtcag
atcccggtggagtacatcgatctgctcacagaggtgcgagggtttgacaactctcaaaaa
gaagagtacttcaggaggaaaatcagcgacaagagcttggcaaaccgggtgattgcgcat
gtgaaatcttgccggagtctccacatcatgtgccacataccggtcttctgctggatggcg
gcgaatgttctcgagaagaatttggcaacaaaattcaacaaagaaacaccaaagactctc
acacagatgtacatccacttcctgtctctgtatgcagacaacatgaagaaaagcctctta
ggcagaaggaagtccaatgctgacagtgtgagaaataacctccttacgttgggtaaactg
gctttcaaggagctcgagaagggccacctgatcttctacgagagcgacctcatcctcaat
ggcatcaatgtctcacaggcatccacattttctggagtctacacgcagatcttcaacgag
gagatgacactgtgcaaggagaagatgttctgctttgtgcatctgagcattcaggagttc
tttgcagcgttgtacgtctatctcactttccacaacgaaaacaccaatgtcttggtcaag
aagtcgtccatatcacgccgtctcctctccagggaatcgtcagagcttattctctacaaa
gaagcagtagaaaaggctttgaagtgtgaaaacgggcattttgacatctttctgcgcttc
cttttgggcctgtcactggagaccaaccaggcactgctgaaacatctgatgaccagcaat
cggacacaccaaaggacaagaactgaaatcattaaacacataaaggagaggatcaaggat
agccagtccgctgaccgctgcctcaatctgtttcactgtctgaatgagctgaacgaccac
tctcttgtggaggagattaagggctacttcagctcaggcattctgaacaattcaaacctc
tctcctgcccagtgggccacgctggtctttgttttactgacctcagaggaagaactgagc
gtttttgacctggggaactacaccaggtcagaggaggggcttctgagattgctgcctgtg
gttaaaacagttcaagtggcaaatttgaatgcctgtaacctcactgtgatgtgctgtgaa
cacttgtccaacggcatcagctcgtcccaactcagagagctggacctgagtaataacaac
ctgacagatgcaggactgaagcagctgtctgacggactcaagaccagcaaactggagaca
ctcagactgaaaagctgcaacctcacagaggacagctcagacagactggcttccgtcatc
agctctgcctgttgccagctcagattcctggatctcacagacaatgacattcaggactca
ggagtcagaattttctctactggtttaggaagtcctcactgtaagctgcaacaacttgtt
ttgtctgggtgtagagtggcagaagagggctgcactttcctggcatctgcgttgaactcg
tcccagctcaaaaatcttgacctgagtttcaaccacccaggaaactcaggcctgatgctg
ctgacggctttgctggaggacccacactgcaccctggatacactcagtgtggagcagtgc
ggtgaatccaggatcctgcctgggccaaagaaatatacaaagaaactgaccttggaccca
aacactgcgcacagagatttgactctgtctgagggaaacaggaaggctacacggtggacc
aagcaggcgtaccccgatcacccggagaggtttgatttctggactcaggtgctgtgtaaa
gagggactgacgggccgatgctactgggagacggagtggtgcgggagggcctgcatagga
gtgacctacagacggatttgcaggaagggggagggtcatgaatgctggataggcaggaat
gacttctcttggggtttgaactgcaacaaagatggctacagagttctgcatggaagcacg
aatgaagttgttccagttcaagccagctccactaaagcaggagtttacctggactggtcc
tcaggaaccctgtctttttacaggatctcttgtggtgaactcacccttctccacaccttc
cacaccaccttcactgagcccgtgtatcctgggttccacctggcctgggtggactcaaag
gtgctattgtgctaa
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