Nematolebias whitei (Rio pearlfish): 119423587
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Entry
119423587 CDS
T08042
Name
(RefSeq) transcription factor COE3-like
KO
K09103
early B-cell factor
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119423587
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
119423587
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
Motif
Other DBs
NCBI-GeneID:
119423587
NCBI-ProteinID:
XP_037546914
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Position
17:42014634..42202673
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AA seq
614 aa
AA seq
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MFGIQDNLPRGASMKEEPLAVRSWMHSAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSN
FFHFVLALYDRQGQPVEIERTAYVDFVEKEKEPSGEKTNNGIHYKLQLLYSNGVRTEQDL
YVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRF
FLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARR
LDPSEGTPSFLKDSVFHLDTDQRNAGPHPPIYIKGTVVERVNSFKFLCVHISEELTWTTG
YILVNFYRCTIESILTNCITVWYRSCSASDRKALQKVLITPHAIRVQTPPRHIPGVVEVT
LSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVVPRHPGDPERLPKEVLLKRAADLV
EALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPSLGNTTSHGMMAVNSFSGQLAVNV
SETTQGKVGYSRNTSSVSPRGYVPSSTPQQSNYGNTVSNSLNGYGNTGMPNLGVTSSPGF
LNGSSTNSPYGIVPSSPTMAVSNCNSSHGVFSFSAAVKQKSAFAPVVRPQASPPPPNCSA
NSSSGLQVWETVTM
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggatccaggacaacctgccccggggggccagcatgaaggaggagccgctggcc
gttcgctcctggatgcactcggccggcgtggtggacgccaacacggctgctcagagcggg
gtggggttagcccgagctcactttgagaagcagccaccgtccaacctaaggaaatccaac
ttcttccactttgtcctggcgctgtacgatcggcagggccagcccgtcgagatcgaacgc
actgcctacgttgactttgtggagaaagaaaaggagccgagtggagagaagaccaacaat
ggaattcattacaaactgcagcttctctacagcaatggcgtcagaaccgagcaggacctg
tacgtccgactcattgactcaatgaccaaacaggccatcatctatgaaggtcaggacaag
aacccagagatgtgccgagttctgctgacacacgagatcatgtgcagccgctgctgtgat
aagaagagctgtgggaacagaaacgagacgccgtcagaccccgtcatcattgacaggttc
tttctgaagttcttcctgaagtgtaaccagaactgtctgaagaatgcaggaaaccctcga
gacatgaggaggtttcaggtggtggtttcaacaacagtcaacgtagatggtcatgttctc
gccgtctctgacaacatgttcgtacacaacaattccaaacatggccgccgagccaggaga
ttggacccatctgagggtactcccagttttctgaaagactcagtcttccatcttgacact
gaccagaggaacgctggcccacatccacccatctacatcaaggggacggtggtggagcgt
gtgaacagcttcaagttcctgtgtgtccacatctccgaggagctcacctggacgaccggc
tacatcctggtgaacttttatcgctgcaccattgaaagcatcctgaccaactgcatcaca
gtctggtacaggagctgctctgcctcagaccggaaggcgctgcagaaggtgttaatcaca
cctcatgccatcagggttcagactccgccccgtcacatcccaggtgttgttgaggtcaca
ttgtcctacaagtccaagcagttctgtaaaggggctccaggaagatttgtctacacagca
ctaaatgagcccaccattgattatggtttccaaaggttacagaaggttgtgccccgccac
cctggagaccctgagagactacccaaggaggtgctactgaagagagcagctgacctggtg
gaggccctctatgggatgcctcacaacaaccaggaaatcatcctgaagcgagcagcggac
atcgctgaagcgctttacagcgttcccaggaaccacaaccagatcccatcgcttggcaac
accacctcgcatggcatgatggcagtaaactccttcagcggacagctggccgtcaacgtc
tctgagacaacacaaggtaaggttggttacagtcggaataccagcagcgtgtcaccacgg
ggatatgtcccaagctccaccccccaacagagtaactacggtaacacggtcagcaacagc
ctgaatggttacggtaacactggcatgccaaaccttggagtgacgtcgtcacccggtttc
ctgaatggctcgtccaccaactcgccgtatggcatcgtcccctccagtcccaccatggct
gtgtccaactgcaactcgtctcatggggttttttccttctcggctgcagtcaaacagaag
agcgcctttgctcctgttgtccgcccacaggcttctccccctcctcccaattgctctgcc
aacagttccagtgggctgcaagtatgggagactgtgacgatgtga
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