Nematolebias whitei (Rio pearlfish): 119423743
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Entry
119423743 CDS
T08042
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119423743 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119423743 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119423743 (ldb3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
119423743
NCBI-ProteinID:
XP_037547079
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All DBs
Position
17:complement(33443809..33457907)
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AA seq
289 aa
AA seq
DB search
MSAYTVTLSGPAPWGFRLQGGKDFNMPLTISRITPASKASGGTLTQGDIISAIDGVSTDG
MTHLDAQNKIKAATNKLTLSMQKSRRPAPVPTATPRMESPMPIIPHQKVIANTAANVEYT
PSFNPIALKDSALSTHKPIEVRGPGGKATIVHAQYNTPISMYSQDAIMDAIAGQSQAKGH
DGEEAGSPLAVLPVKEPVVDCASPVYQAVIRPGDTTQDMSEWARRAANLQSKSFRMLAHI
TGTEYLQDPDEEALQRSREKFESEVKGPRFAKLRNWHHGLSAQILNIQE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtacacagtgactctgagcggccccgctccgtggggcttcagactacaggga
gggaaggacttcaatatgcccctcaccatctccaggataacccccgccagcaaggcatca
ggtgggaccctgacccagggcgacatcatctcagccatcgatggagtcagcaccgacggg
atgacgcacctggacgcccagaacaagatcaaggcggccaccaacaaacttacgctctca
atgcagaaatcaagacgtccagctccagttcccacggcaactccaagaatggagtcaccg
atgcccatcatcccacaccagaaggtcatcgccaacacagccgcaaatgtggagtacacc
cccagtttcaaccccatagctttgaaagactcagccctctccacccacaaacccattgag
gtgaggggtccaggaggaaaggccaccattgttcacgcccagtacaacacacccatcagc
atgtactcacaggacgccatcatggacgccatcgcaggacaatcacaggccaaaggacat
gacggcgaggaggccggatctcctttggctgttctgcccgtcaaagagcccgtggtggac
tgtgcctctccggtgtaccaggcggtgatcaggccaggagacacaacccaggacatgtct
gagtgggctcgccgggctgccaacctgcagtccaaaagcttcaggatgctggctcatatc
accggcacggaatacctgcaagatccagatgaggaagcactgcagagatcaagggagaag
tttgagtccgaggtcaaagggccgcggtttgccaagctgaggaactggcaccacgggttg
tccgcacagatcctcaacatccaggagtaa
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