Nematolebias whitei (Rio pearlfish): 119423763
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Entry
119423763 CDS
T08042
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04020
Calcium signaling pathway
nwh04080
Neuroactive ligand-receptor interaction
nwh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119423763
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119423763
04082 Neuroactive ligand signaling
119423763
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119423763
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Glutamate (ionotropic)
119423763
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Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
119423763
NCBI-ProteinID:
XP_037547105
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Position
17:34608225..34715412
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AA seq
1388 aa
AA seq
DB search
MVTNRGHPRPSPWPPVVLLLLISSPPPLQARPLLVHSSVNVAVVFSGSSYQNEVRGRLSG
ENFVDLPVVVSPVTVLVNDTNPRDLLTHLCDTMATEKLHGVVFEDDVGSGAGDQVAEVAQ
ILDFLSTQTALPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQVICMFKMLEEYDWGEFA
VVTSLMPGYDTFVDIVQSYTDTSYFLWNLQDIMTLEMSVGANDLKTKRMLQQLDSQVLLA
YCSHEEAQYLFRLAAEVGLLGPGYIWILPSLAVGNPNSLPPATFPVGVIGVITDQWRKSL
RQRVREGVAIIAKGAESFKKAYGFIPEGHGDCNKPAKQSENNTLFRHMMNVTWERKDLSF
NNQGFLSNPSMVIIALDRERQWDKVGTFARGILQVRYPIWPRYGSFLEHVSDDRHLTVAT
LEEHPFVMVENVDPGTGTCVRNTVPCRRQSNHSDSPFGQSESFTKLCCKGFCIDILKKLS
KTIKFSFDLYLVTNGKHGKLVHGIWNGMIGEVVYRRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSL
VSAKASGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMMKY
NQKGVEEALDSLKNGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALEKD
SRWKRPIDLALLQFLGDGDTERLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAM
GLSLLVFAWEHLLYWKLRHSLHKSHKLDFLLAISRGIYSCFKGVEDPGRSSGLAKPDLTS
NYAQANMLKMLRTAKDLVSTANVESSLDNATKTIEHLSRHGGTLPVRIQQVSTENVPGGF
AYVTENHCSLPQRSITPPLTSVTSLKQQRGVSRPTPLRYTLPTRSSSCLYDRPLPVSSLS
TPHLAVGEPLPHQHPHHYHTTGRIYVDSYSHSPFIPYSDLQLPDIYTSHPVSLSQNQHVQ
VGFSQPKRRSKSFQSDNVDVERRKHGEQGMNNKSPIGLSELKANHLHANHVSNPSVDNIY
LGDSLCPQVENYGSWPPEDLVLRGRRRHRRPSFLKATWGSEQIRHFDESQSSLSSQSPSI
LPDLFPCAVTPTTSAKPYNPAHLRNNLCLPRNQTYLHIREDQRRPNGRKGQRLRYSHSTH
LPTYGEAVRHGTGLGRGMVRRATSLLSRQYAHYLNSYPGLPLYHGPLDVQHHSQASSPVC
QLLACGGGQCGGQRGLLYQDSLYGAYGVYQGSQTGSEGPVGQGVGSHPVGSPCVLRPWRR
VSSLESEV
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccaacaggggacaccctcgcccctcgccctggcctcctgtcgtcctcctgctc
ctcatctcctccccgccgccgctgcaggcacggccgctcctcgtccactcgtccgttaac
gtggcggtggtgttcagcggctccagctaccagaacgaggtcagaggtcgcctcagcggg
gagaacttcgtggacctgcccgtggtggtcagcccagtgacggtgctagtcaacgacacc
aacccccgtgacctgctgacccacctctgtgataccatggcaacggagaagctgcacggg
gtggtgtttgaggacgatgtgggctcaggtgcaggtgatcaggtggcagaagtggcacaa
atcttggacttcctctccactcagacagctctgccgattgtgggcatcagcggtggctct
gcggttgttattccatacaaggcggagggatcctcctttttgcagatgggagcttctctg
gagcagcaggtcatctgcatgttcaagatgttggaggagtatgactggggcgagtttgcg
gtggtcaccagcttgatgccaggctatgacacttttgtggatattgtacagtcttacaca
gacacttcctacttcctgtggaacctgcaagatattatgaccctggaaatgtctgttggg
gccaatgacttgaagaccaaacgcatgctgcagcagttggactcccaggtattgctggcg
tactgctcacacgaggaggcgcagtacttgttccgtctcgcagctgaggtgggcctgctg
gggcccggctacatctggatcctccccagtctggctgtgggcaaccccaacagccttcca
cctgccacctttcccgtgggtgtgatcggtgtgataacagaccagtggaggaaaagtttg
cgtcagagagtgagggagggggtcgccatcatagccaaaggggcagagagctttaagaag
gcttacggtttcattcctgaggggcacggtgactgcaacaaaccagccaaacagtcagaa
aacaacactctgttcaggcacatgatgaatgtgacatgggaaaggaaggatctgtcgttc
aacaaccaaggcttcctatccaacccctccatggtcattattgctttggatcgggagagg
cagtgggacaaggtgggaacgtttgctcgcggcatccttcaggttcgctaccccatctgg
ccgcgctacggcagcttcctggagcatgtatctgatgaccgccacctgactgtggccacc
ctggaggagcatccctttgtcatggtggagaacgtggacccaggaaccggcacatgcgtc
cgcaacactgtgccctgcaggcgtcagtccaatcattcagacagtcccttcggtcaatca
gagtccttcaccaaactgtgctgcaagggtttctgcatagatatcctcaagaaactgtcc
aaaaccatcaagttctccttcgacctttacctggtcaccaatgggaaacatggcaaactg
gtgcatgggatttggaacgggatgatcggggaggttgtgtacaggcgtgctgacatggcc
atcggttctctcaccatcaacgaggagcgctctgaaatcatcgacttctccgtaccgttt
gttgagacgggcatcagtgtcatggtggctcgtagtaacggaacagtatccccgtctgct
tttcttgagccttacagtccagcagtttgggtcatgatgtttgtgatgtgcctgaccgtg
gtggctgtgaccgtgtttgtgtttgaatacttcagtccggttggctacaatcgcagtctg
gtgagcgctaaagcttctgggggtccgacgttcaccatagggaaatctgtgtggctgttg
tggggtattgtcttcaacaactctgtccccattgagaaccccaaaggaaccaccagtaaa
atcatggtactggtctgggccttcttcgctgttatcttcctggcttcttacactgccaac
cttgctgctttcatgatccaggaacaatacatcgatacagtgtctggcctctctgacaag
aagttccagaaaccacaggagcattaccctccttttcgcttcgggacagtcccaaatggg
agcacagagaggaacatccgcagcaactaccctgacatgcacacacacatgatgaaatac
aatcagaagggggtggaagaggccctggatagcctgaaaaacgggaaactggatgccttc
atctacgatgctgctgtcttgaactacatggccggaaaagacgagggctgcaaactggtg
accattggcagcgggaaggtgtttgccaccacaggatatggaattgctctggaaaaagac
tcgcgctggaaaagacctatagacctggcgttgctgcaattccttggagatggagacacg
gaacgactggaaacagtctggttgtctggtatctgccagaacgagaagaacgaagtgatg
agcagcaagttggacattgacaacatggcgggcgtcttctacatgcttctggtggcaatg
ggcctcagcctgctggtgtttgcctgggagcacctactttactggaaacttcgacactct
ctccacaaatctcacaaacttgacttcctgttggccatcagtaggggtatttacagttgt
ttcaaaggagtagaggaccctgggcgttcatctggtttggccaaacctgacctgacctcc
aactatgctcaagcgaacatgctaaagatgcttcgcactgccaaggatctggtctccact
gccaatgttgagagctccttggacaacgccaccaaaaccatagagcatttaagtcgtcat
ggtgggaccctacctgttcgtattcaacaagtttccacggagaacgtgccaggaggcttt
gcatatgttactgaaaatcactgctccctaccccagcgttctatcacgccacctctaacg
agtgttacctctctcaagcaacagaggggtgtaagcaggccaacaccactgcgttacaca
cttcctacccgctcttcatcatgcctgtatgacagaccactccctgtgtctagcctgagc
acccctcacctggctgtaggagagccacttcctcatcagcacccacaccactaccacacc
actggaagaatctatgtagattcctattctcactctcctttcattccttactctgatctc
caactgccagacatctacacatcacatcccgtttccttgtcccaaaaccaacatgtccag
gtgggcttctcccaaccaaaaaggaggtcaaagagttttcagagtgacaatgtggatgta
gaaaggagaaaacatggggagcagggaatgaacaacaaaagtcctattggtttgagtgag
ctcaaggccaatcaccttcatgctaatcatgtttccaacccaagtgttgacaatatttat
ttaggagatagtctgtgtcctcaggtagagaactatggctcctggcctccagaggatctt
gtgctcagagggcgacgcaggcaccgccgaccctcttttcttaaagcaacttggggtagc
gagcaaattcgtcactttgatgaatctcaatcttctttgtccagccaatcaccttcaatc
ttgcctgatctgtttccatgtgcggtcactccaactacatccgccaagccttacaatcct
gcccatctgcgaaacaacctgtgcctcccaaggaatcagacctacctccacatcagggag
gaccagaggaggcctaatgggcgtaaaggccagagactgcgctactcccactcaacccac
ctcccaacatatggggaagcagtacgacatggaactgggctaggacgaggaatggtgcgg
agagcgaccagccttctcagtcgtcagtacgcacactacctgaactcataccctggactt
ccactttaccatggtccactagatgtccagcatcacagccaggcttccagccccgtttgc
cagctgttggcctgtggtggtgggcaatgtggaggccagcgaggcctgctgtatcaggac
agcttatatggagcttatggggtctatcagggatcccagactggatcagagggtccagta
ggacagggagtgggtagccaccctgtggggagtccctgtgtacttcgaccatggcgacgg
gtttccagtttggaatctgaagtctga
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