Nematolebias whitei (Rio pearlfish): 119423862
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Entry
119423862 CDS
T08042
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nwh03037
]
119423862
Cilium and associated proteins [BR:
nwh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
119423862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
SAM_2
ART
Motif
Other DBs
NCBI-GeneID:
119423862
NCBI-ProteinID:
XP_037547209
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Position
17:39812345..39817242
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AA seq
476 aa
AA seq
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MNDRYHRAARDGFLDVLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVGRGGDPDR
CDIWGNTPLHLAAANAHLNCLSFLVAFGANVWCLDNDYHTPLDMAASKGHMDCVRYLDSI
AAKQITLNAKLVSKLKDRAFHAAERRIKDCEKLQRKHHERMERKFMKESAGFDNMDAISF
SSYTSSSTLSRKFNTVTSNMPYSQATLHSTAKGKAKIQRKLEKKKVDGTFKIYEDGRRSV
RSLSGLQLGNDVMFLKQGTYASPKERTRLNIRDMFPRDMDDDVETVSRAMSDPGLYEAAF
SEISADSGRDSLFTRPGLGTMVFRRNYMTAGMFGIGGRNEGSVAGSEPIGRAPNVRLRGR
LPRRASSFDEDSIGSAYSLQEKNLQELPWEDVDVGLDEDMEPEHNPLETFLASQGLGEFM
SIFLREKIDLEALLLCSEQDLTSIHIPLGPRKKLLDACKRRLDTLEEPDAIEDTEL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccggtaccaccgggcggcccgggacggcttcctggacgtcctgaaggaggcc
acgcggaaggatctgaacgccccggacgaggacgggatgactccgaccttatgggccgct
taccacggaaacctggaggcgctccggctcatcgtgggcagaggaggagatccagaccgc
tgtgacatctggggcaacactccgcttcatctggccgccgccaacgctcacctcaactgt
ctgtccttcctggtggccttcggtgccaacgtgtggtgtctggacaacgactaccacaca
cccttggacatggccgcctccaagggccacatggactgcgtccgctacctggactccatc
gccgccaagcagatcaccctcaacgcgaagctggtcagcaagctcaaagaccgggcgttt
cacgccgcggagcgtcgcatcaaggactgcgagaagctccagaggaagcaccacgagcga
atggagaggaagttcatgaaggagtctgcgggtttcgacaacatggacgccatcagcttc
tccagctacaccagcagcagcacgctgagccgcaagttcaacaccgtcacctccaacatg
ccatactcacaggccaccctgcattcgacagccaagggcaaagccaagatacagaggaaa
ctggagaagaagaaggttgatgggacgtttaagatctacgaggacgggaggaggagtgta
cgctcgctgtccggactgcagctgggaaacgatgtcatgttcctcaaacaaggcacctac
gccagccccaaggagcgcactcgtctcaacatccgggacatgttccccagagacatggac
gatgacgttgagaccgtctcccgtgccatgagcgacccaggtctctacgaggctgcgttt
tcagaaatcagcgctgactctgggcgtgattctctgttcacccgccccgggctcggcacc
atggtgttcaggaggaactatatgacggctggcatgtttgggatcggaggacggaacgaa
ggaagcgtggcgggaagcgaacccatcggccgagcgcctaacgtccgcctgcgtggacgg
ctgccccgacgcgcctccagctttgatgaggacagcattggcagcgcctacagcctgcag
gaaaaaaacctgcaggagctgccctgggaagacgtggacgttgggctggacgaggacatg
gagcctgaacacaatcctctggagacgttcctggcctctcagggcctcggagagttcatg
tccattttccttcgggaaaagatcgacctggaggctctgctgctctgttcagaacaggac
ttgacgagcattcacatccccttgggccccagaaaaaaactgttggacgcctgtaagaga
cgattggacacgctcgaggaaccagatgctattgaagacaccgagctttga
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