Nematolebias whitei (Rio pearlfish): 119423864
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Entry
119423864 CDS
T08042
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119423864 (trim16)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119423864 (trim16)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119423864 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
CENP-K
WXG100
Rab5-bind
DUF4407
Remorin_C
COG6_N
Motif
Other DBs
NCBI-GeneID:
119423864
NCBI-ProteinID:
XP_037547210
LinkDB
All DBs
Position
17:39836264..39845870
Genome browser
AA seq
607 aa
AA seq
DB search
MAEPSAAEQAGPGSVQVQNSCEVCSGELSPDQPCPHSVCVSCLGDKGCPKCPQSPVKTDP
ADGPQQNGTAEDPNPAELKIQEDVKETEDQKESEPTEEEKQEPPLGPEDVVCDSCIESPC
RALKSCLTCLVSYCQTHLRPHLENPKFQNHRLVEPLRDIERRTCEGHKWPLEEFCCSDLR
CVCRDCVTAEHPDHETVPVREARTRIEKELKEKQTEVLKTVTAAENAINKLQDNTVSIEH
SVLEVRAVVETQFQELQAVLERAKKEVTEVLEGEEQQALKQAQGIRVHLEQRCSELKKTQ
AQMEKVFRNKNDVDFLQEYAEWKKEATDISLPGIYIGLMDRLNSFSRAVVESTQELCETL
VSSYIEKVKATCRNDRTGIKITVDTTSEDEPNKPLPDPKTRDDFLKYAAHVSFDADTAHK
FLRLTEDNRKVTNTTPWQHPYPDVPERFENCRQVLAAESFYLNRHYFEADVSGEGAHVGL
TYKSIDRKGSESNSCITGNNFSWCLQWNGRTFSAWHSGVETPLNVERFTRIGVFVDYTRG
LIAFYGVDETMMLIHKYEAEFLEPLYPAVWLPKKENVVVLVAPGETLPLKSPSPPTSPAN
GAVVVPT
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccgtcagcagcagaacaggcgggtcctggttccgtccaggtgcagaactcc
tgtgaggtctgctcaggtgagctgagcccggatcagccttgtcctcactcggtctgtgtc
tcctgcctcggagacaaagggtgtccaaagtgtcctcagagtcctgtcaaaacggatcct
gcagacggacctcagcagaacggaaccgctgaggacccaaacccagcagagctcaaaatc
caggaagacgtaaaggagaccgaggaccagaaggagtcggaaccgacagaggaggagaag
caggaacctcctctgggtccggaggacgtggtgtgtgactcctgcatcgagagcccctgc
agggccctgaagtcctgcctcacctgcctggtctcgtactgccagacccacctgcggccc
cacctggagaacccgaagttccagaaccaccggctggtggagccgctccgggacatcgag
aggcggacctgcgagggccacaagtggcccctggaggagttctgctgctcggacctccgc
tgcgtgtgtcgggactgcgtgaccgccgaacacccggaccacgagaccgtcccggtccgg
gaggcccggacacggatcgagaaggagctgaaggagaagcagacggaggtgctgaagacg
gtgacggctgcagagaacgccatcaacaaactccaagacaacactgtttccattgagcat
tcagtgttggaggtccgagccgtggtcgagactcagttccaggagctgcaggcggttctg
gagagagccaagaaggaggtgactgaggtcctggagggcgaggagcagcaggcgctgaag
caggcccagggcatacgggtccacctggagcagaggtgctcggagctgaagaagacccag
gcccagatggagaaggtgttcaggaataaaaacgacgtggacttcctgcaggagtacgcc
gagtggaagaaagaggccaccgacatctccctccctggcatctacatcggcctgatggac
cgtctgaactccttcagccgggccgtcgtagaatccacgcaggagctctgtgaaacgctc
gtgtcctcgtacatcgagaaagtcaaggcgacgtgcagaaacgacagaactggaataaag
ataacggtggacacgacgagtgaagacgagcccaacaagcctttaccggatcccaagaca
cgcgatgacttcctgaaatacgccgcccacgtgagtttcgatgccgacacggctcacaag
ttcctgcgcctgacggaggacaacaggaaggtgaccaacaccaccccgtggcagcacccg
taccccgacgtacccgagcgcttcgagaactgccgccaggttctggctgcagagagcttc
tacctgaaccggcactacttcgaggcggacgtcagcggcgagggcgcgcacgtcggcctg
acgtacaagagcatcgaccgcaaaggcagcgagagcaacagctgcatcacggggaacaac
ttctcctggtgcctccagtggaacggacgcaccttctcggcctggcacagcggcgtggag
accccgctgaacgtggagaggttcactcggatcggggtttttgtggactacacccgaggc
ctcatcgctttctacggcgtggatgaaaccatgatgctcatccacaaatacgaggcggag
ttcctggagccgttgtatccggctgtctggttgccaaagaaggagaacgttgtcgtcttg
gtggctcctggggagacgttacctctgaaaagcccctcccctcccacctcacctgcaaac
ggagctgttgttgtaccgacttaa
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