Nematolebias whitei (Rio pearlfish): 119423902
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Entry
119423902 CDS
T08042
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119423902 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119423902 (gspt1)
03012 Translation factors [BR:
nwh03012
]
119423902 (gspt1)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119423902 (gspt1)
Translation factors [BR:
nwh03012
]
Eukaryotic type
Release factors
119423902 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119423902
NCBI-ProteinID:
XP_037547256
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All DBs
Position
17:complement(20328979..20345009)
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AA seq
566 aa
AA seq
DB search
MDSRDTAPDSWEQEEDAEAPELPAAFAALNVNAKPFVPNVNAPVFVPSFLQSGPVETPAS
GAPVENGNTEADMNTEEETWEQKEEPGGGEGGGGQEAGTEGGCEEGGAAGREDEEMMEEE
EEEMPVPKVAPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREA
KEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGA
SQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLER
YEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDFAPEGSWYTGLPFIAHLDSLPN
FNRSSDGGVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHTVEVLSLLSDDVET
DDASPGENLKLRLKGIEEEEILPGFILCSPDNLCHTGRTFDAQIVIIEHKSIICPGYNAV
LHIHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRAAGVICLETFKDFPQ
MGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagatacagccccggattcatgggagcaggaggaagatgccgaggccccg
gagctcccagccgccttcgctgccctcaacgtgaacgccaagccgttcgtccccaacgtg
aacgccccggtgtttgtacccagcttcctccagagcggcccggtagagacgccggcctca
ggtgctccggtggagaacggaaacaccgaggcggacatgaacacagaggaggagacgtgg
gagcagaaggaggaacctgggggaggtgagggaggtggaggacaggaggcgggtacagaa
ggaggctgcgaggagggaggcgccgcggggagagaagatgaggagatgatggaggaggaa
gaggaggagatgcccgtacctaaagtggctcctccgccacccgacgctcccaagaaggag
cacgtgaacgtggtcttcattggtcacgtggatgctggtaaatcaacaattggagggcag
atcatgtacctgactggaatggtggacaagagaactctggaaaaatacgagcgagaagca
aaagaaaagaacagagagacatggtatttatcgtgggctttggacacaaaccaggaggag
agagacaaggggaagacagttgaggttgggagagcttactttgagactgagaagaagcat
tttaccatcctggacgctcccggacacaagagctttgtccccaacatgatcggcggcgcg
tcacaagccgacctcgcagttctggtaatctcggcaagaaagggggagtttgagaccggc
tttgagaaggggggccagacacgggaacacgccatgctggctaaaacagcaggagtgaaa
catctcatcgtcctgatcaacaagatggacgaccccacggtgaactggagcctagagagg
tatgaagagtgtaaagagaagctggtgccatttttaaagaaggtgggcttcaaccccaag
aaggacatccatttcatgccctgctctggactcacaggtgccaacctcaaggactttgca
cctgaaggctcctggtacacaggtttgcccttcatcgcccacctggacagtttgccaaac
ttcaacagatccagtgacggaggcgtcagacttcccattgtagacaaatacaaggatatg
ggcacagtgatccttgggaagctggagtctgggtccatcagtaaagctcagcagctggtc
atgatgccaaacaggcacaccgtggaagtactgagcctgctcagcgacgatgtggagacg
gatgacgcgagccccggggagaacctgaagctgagactgaagggaatagaagaagaggag
atcctccccggttttattctctgcagccccgacaacctctgccacaccggtcgcaccttt
gatgcacagattgtcatcatcgagcacaaatcaatcatttgtcccggctacaacgcagtc
ctccacatccacacctgcattgaagaagtgcagatcacagcattaatctgtctggttgac
aagaagacgggagacaaaagtaaaacgcgacctcgcttcgtgaagcaggaccaggtgtgt
atcgccaggctccgggcagcgggagtcatctgcctagagaccttcaaagacttcccccag
atgggacgattcacactgcgagacgaaggcaaaacgattgcaatcggtaaagtgctgaag
ctggttccagaaaaggactaa
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