Nematolebias whitei (Rio pearlfish): 119423903
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Entry
119423903 CDS
T08042
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119423903
04121 Ubiquitin system [BR:
nwh04121
]
119423903
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
119423903
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
119423903
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-BED
DUF659
hAT-like_RNase-H
zf-met2
LINES_C
Motif
Other DBs
NCBI-GeneID:
119423903
NCBI-ProteinID:
XP_037547257
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Position
17:complement(20319173..20321250)
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AA seq
535 aa
AA seq
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MDVNSSSVSGSPRKIFNTAARQKSKVWNVFGFYKKDGKLYKNHAICKLCRAPLKYTGSTT
NLDQHATRKHREEYGELLKPHNNEQEQAAATQRATGNVITKFYGQLGDSSSRAKDITASI
TRFIAKGLWPYNIVEGEGFQDLIHTLEPRYKIPSRQHITNTCMPALYAQVKSQVEKELAH
AERVAITTDAWTSCSTESYVTITVHYISPDWKLNVHVLQTRAFKGSHTGKNIGALLKQAC
VDWNLLDKDPALVTDNATNMVLAGVEAEMTPHLMCFAHTINLATQKAFKVDTVARLLGRV
RKAVAFFHRSVRAAEILQEKQKQLALPSHKLIQDVSTRWNSSHDMLERFFEQHPAISAAL
MSRDLRKGEEVNTLKDKDFCDIEDIVKLMAPVKLVTTSMSEDKRPTLSMILPVKAKLKKN
FEPSDEDSVLIREMKQAFKNDLEKRYTGLEHLFHTAAALDPRFKSLPFLSNHDAERTFTS
ISAEAASLHHKVTGGSVQRGPVQTDPCQSEPANGDPVVCIDVPQTQDEHKGLCVL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaatagtagcagcgttagcgggtcaccgagaaagattttcaatacagcagcc
agacaaaagtctaaagtgtggaacgttttcgggttttacaagaaggacggaaaactctac
aaaaaccacgctatttgtaagctatgcagagcacctctgaagtacactggtagcacaaca
aaccttgatcaacatgcaacgagaaaacacagagaggagtatggcgaacttctcaagccc
cataacaacgagcaggagcaggcagctgccacacagagagcgacgggtaacgttatcact
aaattttacgggcaactcggcgacagttcatcacgagctaaggatataacggcatcaata
acccgtttcatagctaagggcttatggccgtacaatatagtggagggggaaggatttcag
gatttgattcatacgttagagcccagatataagattccgtcccggcagcatatcacaaac
acatgcatgccagcgttgtatgcccaagtgaagagccaagttgaaaaagaattggcacat
gcagagcgagttgctattacaaccgatgcctggacgtcatgctccactgagtcttatgtg
accatcactgtccactacatctctccagactggaagttaaatgtgcatgtgttgcaaacc
agggcattcaaaggatcccacactgggaaaaacattggtgctctgctaaaacaggcatgt
gttgactggaaccttcttgataaagatccagccctggtgacagacaatgccacaaacatg
gtattagctggagtggaagcagagatgacccctcacctcatgtgctttgcacacactatt
aatctcgccacacagaaagcctttaaagttgacacagtagcaaggttgctggggagagtg
aggaaagccgttgccttttttcatcgtagtgtgagggcagcagaaatccttcaagagaaa
cagaaacaactagccttgccttcccacaaactcatccaagatgtatccacgcggtggaat
agctcccatgacatgcttgaacgcttttttgagcaacatcctgcgatttctgcagcactc
atgtccagggacctcagaaaaggagaagaggtgaatactctcaaggacaaagacttctgc
gacattgaagacattgtcaaactgatggcgccggtcaaacttgtgactaccagcatgtct
gaagacaagcgacccacactctcaatgattcttcctgtaaaagcaaagcttaaaaagaac
tttgaaccatcagatgaagactcagtgttaatcagagagatgaagcaggcgttcaagaat
gacttggagaaacgctacacaggccttgaacatctcttccacactgcagcagctctggac
ccccgttttaagtccctgcccttcctcagtaaccatgatgcagagaggacattcacaagc
atatcagcagaagcagcatccctgcatcacaaggtaacggggggttcagttcagagaggt
ccagtgcagactgatccatgtcagagtgaacctgcaaatggagatccggtcgtctgcatt
gatgtaccccagacccaagatgagcataaaggtttgtgtgttttataa
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