Nematolebias whitei (Rio pearlfish): 119423913
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Entry
119423913 CDS
T08042
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119423913 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119423913 (usp42)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119423913 (usp42)
Peptidases and inhibitors [BR:
nwh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119423913 (usp42)
Ubiquitin system [BR:
nwh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119423913 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
119423913
NCBI-ProteinID:
XP_037547269
LinkDB
All DBs
Position
17:20989765..21006998
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AA seq
1178 aa
AA seq
DB search
MTIVDKLSEKSDHESVGFNRSSFSSGDVGMDGSCSSSWAVGPTMPSDSPRLKSPGGCMGP
TPGAAVYNSTPSSMDRPKDQVISSGDGIELPQKVLFPPERLSLKWTQVHRAGAGLQNMGN
TCFLNSALQCLTYTPPLANYMLSREHSKTCHEPGFCMMCTMQNHVIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLR
SRVKCLNCKSVSDTFDPFLDITLEIKTAPSVSKALEQFVKAEQLDGENAYKCTKCKKMVT
ASKRFTIHRSPNVLTLSLKRFANFTGGKITKDVKYSEYLDLRPFMSQCQGEAQIYGLYAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSSDVKKTG
NYNNFSHNNPGISGQSSPRPVVTPRIHTTSNHNSTGFIGPQLPPHMTKSAPHVNGNGSLK
DFPTSSKASTSSSAAGKPGNGPASSSISHSISRPTMIPDQDKRQKLSFFIGQGKQNRPAS
SSSYSQPSSASSSSSSSQSTSDAHSVPHVNGTSCSNGDHAAGNGTSFLVPYSQESSEESD
QENGGSLDNGCLSKSQTKENNVPADVCAGSPQNTNGEPEVHQNGNKLNGPTCGDSKSTPN
GHEHHKVNRHSTPEKVSTSNHSSSSSGIAVANGLGAGHCQPSKETPQSASSQASSSQHFH
SAASESEHFPADTRAKTLSEPLPRHTSSTVSTPPSALTTDTHSAALKESALPERPGTLTA
LSSEPDSCQSASGVAAPQKVSKNDDEAKNSLQTNGPSAGTEGQLEYKCQFQSKPSPRRNE
QQSSPDRERDRLCSDYSRHRERHYRDRSPTQDGHSDRYRYRRDHRDHHRSFRDRLPPPQR
KYRDWEFDRHRQRAVPHYWDHDRHRRSYYSSHQRFDGGHERRGHPHRDESHSGWRWQQDS
RGSRTVTDRRSAWEKDCYRSKERSSSPAALLETNKSKLSPPRARPSNTDSSFRKSDQSAA
EHVKREREDSSEASRCKKHKKSKKKKKSKDKDRHHESSSDVDSDRATETRRKKKKKRRRR
DSDSEQRSPDAARGHNRSSEERESRKRRHSVTKDSKHDGGSPPEKRRRTDYADGSRDQLL
PPHHNPTSSDSTHAHLNGYTGNGSSQTNNSSSSSRHRL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaagttgtcagagaagtccgaccacgagtcagtcggatttaaccgc
tcctccttctcaagtggagacgtggggatggacggcagctgttccagcagctgggcagtg
ggtcccaccatgcccagtgactctccaaggctcaagtctccaggaggctgcatgggtccg
acccctggtgctgctgtctacaacagcacaccctcctctatggaccggcccaaggaccaa
gttataagcagtggggatggaatcgagttgccccagaaggtcctgttccctccggagcgg
ctcagcctaaagtggacccaggtccaccgtgcgggtgccggcctgcagaacatggggaac
acgtgcttcctcaactcagccctacagtgtctcacctacacgccaccgttagccaactac
atgctgtcaagggagcactctaaaacatgtcacgagccgggtttctgtatgatgtgcacc
atgcaaaaccacgtcattcaggtttttgccaactctgggaatgtcattaagcccatcggt
gtactcaatgagcttaaaaggattgcaaagcacttccgctatggaagtcaggaggatgca
catgagttccttcggtacacggtggacgctatgcaaaagtcctgcctacctggaactaag
ttggacagacaaacgcaggcaaccaccttcatccatcaagtatttggtgggtatcttcgg
tccagagtgaaatgtttaaactgtaaatcagtctcagatacatttgatccttttctggat
atcactctggaaattaagacagctcctagtgtctctaaagctctggagcagtttgtaaaa
gcagaacagctggatggtgaaaatgcctacaagtgcaccaagtgcaaaaagatggtcaca
gcctcaaagaggttcacaattcaccgcagccccaacgtgctcaccctctcactaaaacga
tttgcaaacttcaccggaggaaaaatcaccaaggatgttaaatattcagaataccttgac
ctgcggcccttcatgtctcagtgtcaaggagaagcccagatctacggactgtatgctgtt
ctggtccactctggattcagctgccatgctggacactacttctgctatattaaggctagc
aacggtcagtggtatcagatgaacgactcctctgtgtctgtgagcgacatccgctctgtc
ctcaaccaacaggcttatgttcttttctacatcaaatcatctgatgtgaagaaaactggg
aactacaacaacttcagtcataacaaccccggcatctccggtcagtcgtctccacggcct
gtggtgacgccgcgcatccacaccacctccaaccacaacagtactggcttcataggtcca
cagttacctccacatatgaccaagagcgctccacacgttaatgggaatggatctctgaag
gacttccccaccagttccaaagccagcaccagcagcagcgcagctggaaaacctggcaac
ggaccggcttcttcctccatctctcactcgatcagccgacccacgatgatcccggaccaa
gacaaacgacaaaagctttcatttttcatcggacaaggcaaacagaaccgaccagcgtct
tcgtcctcctacagccagccgtcctctgcgagcagctcctcctcttcctcacagtctacc
tcagatgctcactccgttccacatgttaacggcacatcttgcagtaatggggatcatgct
gcagggaacggaacgtctttcctggtaccgtacagccaggagtcttctgaagaatcggat
caggaaaacggtggctctctagataacggctgcttgtccaagtctcagactaaagaaaat
aatgtcccggcagatgtctgtgctggttctcctcaaaacacaaacggtgaaccagaagtg
caccaaaatggtaataaattaaacggaccaacctgcggagactctaaatccaccccgaac
ggacatgaacaccataaagtgaatcgacacagcactcctgagaaggtttctaccagtaat
cacagcagctcgtcctctgggattgctgttgctaacggactcggcgctggtcattgtcag
ccaagcaaagagacgccgcagtctgcctcatcccaagccagttcctctcagcactttcat
tctgctgccagtgaaagtgagcacttccctgcagacacaagggctaaaacgctgtctgaa
cccctgcctcgtcacacctcatccactgttagcactccaccgtcagctttgaccacagac
acccactctgctgcactgaaagagtctgctctcccagagcgtcctggtaccctcacggcc
ttatcctcggagccagacagctgccaaagtgccagcggagtagctgctcctcagaaggtt
agcaaaaatgacgatgaagccaagaattccttacagaccaatggtccatcagcaggaact
gaaggacaactggaatacaagtgtcagttccagtccaaacccagtcctagaaggaatgaa
cagcagtcctctccagacagggagagagaccgactgtgctctgactacagcagacacaga
gagagacactacagggacaggagtccaacacaagacggccacagtgaccgctatcgctac
agacgagaccacagagatcaccatcgctccttcagggatcgtttgcctcctccccaacgt
aaatacagggactgggagttcgatcgtcatcggcagcgagctgtcccgcactactgggac
cacgaccgccacaggcgctcctactattccagccaccaacggtttgatgggggccacgag
cggaggggacacccccaccgtgacgagtctcacagtggttggaggtggcagcaggacagt
cgagggtcacggacagtgacggacagaaggagcgcctgggagaaagactgttaccgctcc
aaagagaggagttcttcccctgctgcacttctagaaaccaacaagtccaagctgtcacct
ccccgagcgcgcccctccaataccgactcttcttttaggaagtctgatcagagtgctgcg
gagcacgtgaagagagagagagaggacagctctgaggcgtcccgctgtaaaaaacataaa
aagagcaagaaaaagaagaagtctaaagataaagaccggcaccacgagagcagctcagac
gtggactcggacagagccacggagacacggaggaagaagaaaaagaagaggaggcgcagg
gacagtgattcagagcagcggagtccagatgcagctcggggccacaaccgaagcagcgaa
gaacgggagagccgtaaacgtcgtcactccgtcaccaaggactctaaacacgatggcgga
tcgccgccggaaaagcgacgtcgaacggactacgctgatggcagcagggaccagttactc
cccccacatcacaaccccacttcaagcgattcaacacacgcccatctcaacggatacaca
ggaaacggttccagtcaaaccaacaactcctccagcagctccagacaccgactctga
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integrated database retrieval system
