Nematolebias whitei (Rio pearlfish): 119423955
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Entry
119423955 CDS
T08042
Symbol
lrrc4bb
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119423955 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119423955 (lrrc4bb)
Cell adhesion molecules [BR:
nwh04515
]
Immunoglobulin superfamily
NGL family
119423955 (lrrc4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
LRRNT
Ig_2
Ig_6
DUF7617
Motif
Other DBs
NCBI-GeneID:
119423955
NCBI-ProteinID:
XP_037547313
LinkDB
All DBs
Position
17:24570087..24577915
Genome browser
AA seq
727 aa
AA seq
DB search
MRVVMVTSPCPPFPLLWLVQLLLWFYNHGPQLTEAAPPCPTPCTCSNQASRVICTRKSLD
QIPDSISENTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQTHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDSSNGYTYFTTVTVETEQTVXEEMRKTLXXXDERPGITISPS
MSSLSSLSPKANKVENVVTVSIMDVTNIPGLDDVMKTTKIIIGCFVAITFMAAVMLVVFY
KLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTINSGTGGEGTLRIHHPEVVN
IPNIGRTDTLNHYYKSHHFNNNVMGLSIGTEGMGPSMMLNSKNQHGQEIPISCTSVPIST
SNLLNTSGNGTNTNSSSMSPPLPMSLPMPTLGLHGSIKGFMGQNQNPQMEPLLFKGSSKE
NVQETQI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccttgcccccctttccccctcctctggttggtccag
cttctgttatggttttacaatcatggacctcagctgacagaggcagcacctccatgcccc
accccatgtacctgctccaaccaggcgagccgtgtcatctgtacaagaaagagtttggat
caaatcccagacagtatttcggagaatacacgatacctcaacctacaagagaattcaatt
caggtgatcaagtctgacacatttaagcatctacggcatttggaaattctccagctctcc
aagaaccacatcaggcagattgaggtgggcgcttttaacggtttgcccaacctcaacaca
ttggagctttttgacaaccgtcttacagtggtaccgtctcaagcctttgagtacctcagc
aagctaagggaattatggctacgaaacaaccccattgagacactgccggcttttgccttt
caccgtgttccctctttacgacgtctcgatctaggggaactcaggaagttggatttcatc
tcagaggctgcctttgaaggccttgtgaatttgcgctttttgaatcttggcatgtgcggc
ttgaaggacatccccaaccttactccactggtaagacttgaggaattggaattgtcaggt
aaccagcttgggattgtccgacctggatcatttcagggtttagtgtcacttcgaaagttg
tggttaatgcactcccgagtgtcagtcattgaacgcaatgcttttgatgaccttaagaac
ttggaggagctcaatctttcccacaattccttgcattctctgccccatgatctcttcacc
ccgttgcaccagttagagagggtacatctcaatcataatccatgggtttgcaactgtgat
gtcttgtggcttagctggtggctaaaggaaaccgttccaagcaacacaacatgttgtgct
cgttgccatgccccaccaggtttgaagggcaagtacattggggaactagaccagacccac
tttacctgctatgccccagtgattgtggagccacctactgacctcaatgttactgaaggc
atggctgcagagctgaaatgtcgcactggaacctcaatgacctctgtaaactggtttacc
cctaacggtactctcatgactcacggatcatacagagttaggatctcagtgcttcatgat
ggtacgctaaacttcacgaatgtgactgtgcaggacactggtcaatatacttgcatggta
accaactctgctggaaacactactgcaactgctgtgctcaatgtgtctgcttctgactcc
agtaacggctacacttatttcaccactgtcactgtagaaacagaacaaacagtannagag
gagatgaggaaaactctnnnnnnnnnngatgagcgacctggcattacaatctcaccttct
atgtcatctctttcctcactgtcgccaaaagctaacaaagttgaaaacgtagtgactgtg
tccataatggatgtaaccaatattccaggcctggatgatgtaatgaaaacaactaagatc
atcattggttgctttgtggctatcacttttatggcagctgtaatgttggtcgttttctac
aaactccgcaagcagcaccaattacacaagcaccacggtcctgccagagcaattgagatt
gtcaatgtagaagatgaaattggagctggggctggaagtggcatctctggtggttcaacg
ataaattctggcactggtggagaaggaaccctaaggatacatcacccagaagtagtcaac
attcccaacattggtcgcacggatactctcaaccactactataagtcacatcatttcaac
aacaacgtgatgggtcttagtatcggcaccgaaggaatgggacctagcatgatgctcaat
agcaagaatcagcatggtcaggaaattcccatttcctgtacctctgtcccaatctctacg
tctaatttgctcaacacatcgggtaatggcaccaacactaactccagctctatgtccccc
ccactgccgatgtctctccctatgcctaccttgggcttacatggatcaatcaagggtttc
atggggcaaaatcagaacccccaaatggaaccactgctcttcaaggggagctcgaaagaa
aatgttcaagagacccaaatataa
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