Nematolebias whitei (Rio pearlfish): 119423972
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Entry
119423972 CDS
T08042
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04145
Phagosome
nwh04514
Cell adhesion molecules
nwh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119423972
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119423972
09142 Cell motility
04810 Regulation of actin cytoskeleton
119423972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119423972
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwh04147
]
119423972
04515 Cell adhesion molecules [BR:
nwh04515
]
119423972
04090 CD molecules [BR:
nwh04090
]
119423972
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119423972
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
119423972
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119423972
Cell adhesion molecules [BR:
nwh04515
]
Integrins
Integrin alpha subunits
119423972
CD molecules [BR:
nwh04090
]
Proteins
119423972
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
119423972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
ITGAX-like_Ig_3
FG-GAP_2
FG-GAP_3
vWA-TerF-like
Copine
Motif
Other DBs
NCBI-GeneID:
119423972
NCBI-ProteinID:
XP_037547336
LinkDB
All DBs
Position
17:complement(25211786..25240599)
Genome browser
AA seq
1142 aa
AA seq
DB search
MDWIIFVTLFWGVFQAALCFNVDPVAWRSFSNSAAGFGYQVVQRRSDLLISAPLEQYSKD
RRGKVFKCTTDENCDTLMLPEQQAAVNMSLGLAMTSDPTTQNTLACGPTIPKDCKTITMY
NGLCFEINQSNRFGRSYPSSPEECQTQADIALLLDGSGSVSADDFIRMKTFVKDLISAFL
GKDTQFAITQFSSRTVIHYHFNTFSTSDWQRQIDKISKINGGTATAAAIYKVVNDVFSPN
RGSRSNVKKILIVITDGESQDRPNLPEAISLSNSKKIVRFAIGVGNAFSNFIALNELKTI
ASDPPEEFMFQVEGFDALDKIQENLQNKIFSIEGSQTGGETLKLEMSQEGFKAAYVTFRL
ISMLQGIQMSIVGANQWRGGYKKFSLSNPRNTGSYEPAQIEPDSYLGYSMAVATITSGTL
TVVGAPRYKHRGAVITVYREDSEKIIDPYPHQTGGYFGAEICAMDVNSDSYTDLILISAP
MYKDQDREGRVYVCTLTRLNVECHFDSPSQLKVLRGDPSDRGRFGSSLAVLPDLNADRFN
DLVVGAPLENNGQGSVYIFHGEGGGSIDSTFSQRIAASEVQSGLKFFGLSISQWSYDQSG
DTLPDLAVGSKGKVVLLRSRPVVMVDATVSFIPKEIPTQNVDCTKPLEGTSTICFTMRRL
SGRDAVQAQINYTFTLDATRSTPKNRAYISKDQRHKTESVAVDLNGQKCSNVKFFIKSCP
EDALNPLQNELRFIFNGLPSVTNLKPSFILEARTTSFHPIGFEISCGADMVCTDNLKVDF
IFTSSSEVKVGIDELLDVTVSVENRGENSYNSHVILTYPVGLSYRKFTSLHGRVECNSLD
SEDGETRGKTDCTVDKPIFKSSSMAVFIVSYGFNPSRQLDRKIFVTANASSGNQQHSSSS
ELYKKREIEVKYSIFITMESSISYSNFTYGKNNLQKPLQQLIKVTNNIRALNFTVVIRVP
VKLGDKDIWVDMNSLQITDCQKSTDEKPDVTDFIDRIKENKVVVSIHLQCACVIKVPNKK
XQPFILXXXXXXXXXXXIGLPSAKFILTSTASLEYDRTQYIFFSTASNNTPPVRLIETEV
EVFPEPDFTKEIIGGSLGGLAFLVLLTAGLYKAGFFKSKYKGMINAEGEDILGTEETAPT
EE
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggactggattatttttgtgacccttttctggggagtgtttcaagctgccctgtgtttt
aatgttgatccagtggcttggaggtccttcagcaactctgctgcaggttttggctaccag
gtggtgcagagacgatcagatttgctgatcagcgcaccgcttgaacaatattcaaaggat
cgaagagggaaagtatttaaatgtaccactgatgaaaactgtgacacgctgatgcttcca
gagcaacaagctgctgtcaacatgtcccttggtttggcaatgacaagtgatcccaccaca
cagaacactttggcatgtggaccaactattcctaaagactgcaaaacaatcacaatgtac
aatggtttgtgctttgagataaatcagtccaacagatttggacgttcttacccatcttct
cctgaagagtgtcaaactcaagctgacattgctttactgttggatggctcaggaagtgta
tctgctgatgattttattagaatgaagacttttgtgaaagatctaatcagtgcatttctg
ggaaaggatacacaatttgccattacccagttctcctcaagaactgtaattcattatcac
ttcaacacttttagcacttcagactggcaaagacaaattgataaaatttctaaaattaat
ggaggaacagccacagctgcagccatctacaaagttgtaaatgatgtcttctcaccaaac
agaggttccaggtcaaatgtgaagaagattttaattgtcattacagatggagaatctcaa
gacagaccaaaccttccagaagcaataagtttatcaaacagtaaaaaaattgttcgattt
gctattggggtggggaatgcattttcaaacttcatcgctttaaatgagctcaaaacaatc
gcatccgatccccctgaagagtttatgtttcaagtggaaggctttgatgcgcttgacaaa
atacaagagaatttgcaaaacaaaattttttctatcgaaggatctcaaaccggcggcgag
acactgaaacttgaaatgtctcaagagggcttcaaagcagcttatgttacatttagactt
atttctatgttacagggaattcagatgtctattgttggtgctaaccagtggagaggaggc
tacaagaaattttcactttcaaatccaagaaacactgggtcgtatgagccagcacaaata
gagcctgacagctatcttggttattccatggctgttgctacaatcacatcaggcaccctg
acagttgttggggctccaagatataaacacagaggagctgtcatcactgtttacagagaa
gatagtgaaaaaataatcgacccctatccacaccagactggtggatattttggggcagag
atttgtgccatggatgtgaattctgacagctacactgatctgatcctcatctctgctccg
atgtacaaggaccaggacagagagggacgagtttatgtttgcaccctaactcgtctgaat
gtagagtgtcactttgattctccatcacagctaaaggtgctacgaggggatccatcagac
agagggaggtttgggtcttctcttgctgttcttcctgacctaaatgcagacagatttaat
gatttagtagttggagctcctttggagaataacggacaaggctcagtctacatatttcat
ggtgaaggaggcggaagtattgactctaccttctcacagagaatcgctgcctctgaagtc
caatcaggactaaagttctttggtttgtcaatcagtcagtggtcctacgatcagagtgga
gacacactgcctgacttagccgtgggttcaaagggtaaagttgtcttactcagatccaga
cctgtagtgatggtggatgccacggtgtcgttcatcccaaaagaaattccaactcaaaat
gtagactgcacaaaacccctagaaggaacatctacaatctgtttcaccatgagaagactt
tctggaagagatgcagttcaagcccagattaattacacttttacactggatgcaactcgt
tcaactccaaagaaccgagcttacatcagtaaggatcagagacacaaaactgaatcagtt
gctgttgatttaaatggacaaaaatgcagcaatgtgaaattttttatcaagtcttgtcct
gaagatgctctcaatcctctacagaatgagctcagattcatcttcaatggtttgccctcc
gttacaaatcttaaaccaagtttcatcctggaggctcgaacaacatcctttcatcctatt
gggtttgagatcagctgtggtgctgatatggtgtgtaccgacaacctgaaagtggatttc
atcttcacaagttcttcagaggttaaagttggcattgatgagcttctggatgtgactgtc
tcagtggagaacagaggagaaaactcttacaacagtcacgtcattctcacatatcctgtt
gggctctcctacaggaaatttacatctctgcatggcagagttgagtgcaactccttggac
agtgaagatggggaaacaagaggaaagacggactgcactgttgacaaacctattttcaaa
agcagctctatggctgtattcattgtgtcctatgggttcaatcccagcagacaacttgac
cggaagatctttgtcactgcaaatgctagcagtggaaaccagcagcattcctcttcaagt
gaactgtacaagaaaagagagattgaagtaaagtacagcatttttataacaatggaaagc
tccatcagctacagtaatttcacatatggaaaaaataatctacaaaaacctctccagcag
ttaattaaggtcacaaataatatcagagctctgaatttcactgtggtgatcagggttcct
gtgaagctcggtgacaaagacatttgggtggatatgaacagtttgcagattacagattgc
cagaaaagcacagatgaaaaacctgatgtcacagattttattgataggataaaggaaaat
aaagttgtggtaagtatacatttacagtgtgcctgtgtaataaaagtacctaataagaaa
taacagcctttcatactnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattggactt
ccatctgcaaaatttatcttgaccagtacggccagtttggagtatgacagaacccagtac
atcttcttctcaacagcctctaataacacccctcctgttcgcctgattgagactgaggta
gaagtgtttcctgaaccagattttaccaaagagatcataggaggatctctgggagggctg
gctttccttgtgcttctcactgctggtctgtataaggctggattctttaagagcaaatac
aaaggcatgattaatgcagaaggagaagatattctaggtacagaagaaactgcacccaca
gaggaataa
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