Nematolebias whitei (Rio pearlfish): 119424013
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Entry
119424013 CDS
T08042
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
119424013 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119424013 (vti1a)
Membrane trafficking [BR:
nwh04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
119424013 (vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Sec20
Sec8_N
CAP59_mtransfer
Laminin_II
DUF1664
YycI
Motif
Other DBs
NCBI-GeneID:
119424013
NCBI-ProteinID:
XP_037547396
LinkDB
All DBs
Position
17:complement(29412823..29562759)
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AA seq
224 aa
AA seq
DB search
MSSDFETYEQDFGTITAEITNKIGKIPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPVQSRAMYNSRLKSYKQEMEKLEKDFKRSRIAYSDEVRNELLGDDAISSESQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEILSNLHTDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRILIFVLGAVILLTIILAIYLNQRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgaaacctacgagcaggactttggaaccattacagcagaaataact
aataaaattggaaaaatccctaaactaagtggagaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagctgctcgagcagatggacctggaggtgcga
gagatccccgtccagagccgagccatgtacaacagcaggctgaagagctacaagcaggag
atggagaagctcgagaaagactttaaaaggtcgcgcatcgcctacagtgatgaggtgcgc
aacgagcttctgggagatgacgccatctcctccgagagccagttgataaagttacgtgaa
gagagagcacatctgttggacaacacagagaagctggaaaggtcatcccggagactggag
gccggctaccagatagcagtagagactgaacaagtgggacaggagattctctccaacctg
cacaccgaccgtgagaagatacagagagccagggaaaggctgagagaaacggacgcaaac
ctgggcaagagttctcgcatcctcaccggcatgctgagaaggatcatccagaatcgtatc
ctgatcttcgtccttggagctgtcatcctcctcaccatcatcttggccatctatttaaat
cagagaggccactga
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