Nematolebias whitei (Rio pearlfish): 119424229
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Entry
119424229 CDS
T08042
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119424229 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119424229 (abca5)
Transporters [BR:
nwh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
119424229 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Bac_rhamnosid_N
Motif
Other DBs
NCBI-GeneID:
119424229
NCBI-ProteinID:
XP_037547640
LinkDB
All DBs
Position
17:41250993..41273291
Genome browser
AA seq
1659 aa
AA seq
DB search
MRNAGSMQPMIRRDAGVWTQTRSLLYKNLLIKWRTKQQSLQELILPLLLLALLILISTLN
PHVYYGGISTVELDSDVHLQNIKGLGYTPITNVTTHIMEEVAREINMLDHLDMFSSEEEL
ENASLYEPSSYVGVVFMDGSATSYKLRFPYNKLPLPSDYTESIASCYSSLVNCRAANYWL
SGFTRLQSLIDVAIIQMQTRRLVWSELNLNVVMMGQPGSVEVHKFPHALISIYLVLAFTP
FVTFLIVNVAAEKEHRLKDTMTMMGLYDTAFWLSWGLLYAALVTAMSFLMAIIATLTALF
PNSDFFVIFVLIFLYGISSIFFSFMLTPLFKKPKFASTVGSMLTVVFGCMSLFTVLMKDF
PQPLVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLTNGPHPLYVPLLMLFLDCVLYL
LLAIYLDQVLPGDFGLRRSLVYFLKPSYWSKHRKRYVEVSSAYDAEVNGGPGGEEYVEPV
SPEFRGREAIRISNIRKVYKDKDNMVEALRGLTFDIYEGQITALLGHSGAGKSTLMNILC
GICPPTSGSATIYGSPVAEIAEGSEMKQLVGICPQFNIIFDVLTVEEHLRIFAAIKGISH
ADIDAEVSKVLKDLDLEKIMTAQAKNLSGGQKRKLSVGIAILGDPKILLLDEPTAGMDPC
SRHQVWSLLKSRQPGRVIVLSTHYMDEADILADRKAVISQGQLKCLGSSLYLKIKCGVGY
HLRMSIAEGCDAEKVSSLIQLHVPKAELSRRHEAELTFTLPLESVDTFPDLFTELDSQPR
LGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFHREQADDECDAASLDETDQRLLTFSD
NKSDVVSGHALWRQQFSTVAWLHMLNMRREWKAFVYTLVLFLLFVAAVLVVSLATGNIQI
HSPERQFLPVYLLKKNQAAHRYTSALLVQNTSDSDISDFINNLESQDIKVELMKHRDYMS
EAPHSAAINVTGSNKGFRYVVAFNSTNVHSLPMVVNILSNALLRGLNGSGQIRTWTKPFE
YQIPDATSYALVYIEAIMLGMLAAGMPAYFAMDHTRDREIKCRSTLRISGLLPSAYWCGQ
AAVDIPFYYIILSSMNIILFSFHSGNLLGPSHLTSVVLCTIGFGPAMILFTYVVSFGFTR
VQSNRDFFSFISMMVCVVSASIVQLSFVNDNPELTRILHNALCLLNPLYPLMGCLNCITK
ATFLPTLYEENFLWKSLLISVVAPYLQCILLLFLLRWLEIRHGGRALKSDQLCRSSTKPR
PKAERVLEEELNEDEDVQIEKARVKEALSCQSCEEKPAVVVSHLRKQYTGRKEGFSFGKK
TKVAAKNISFCVRKGEVLGLLGPNGAGKSTVMHMLSGDTEPTAGQILMGDYSTEFSPVDS
PLDHVGYCPQVNPLWPRVTLQEHLEIYAAIKGLKGHDVPDIIKRVSNALELKDHLNKQTK
TLSAGLKRKLCFALSMIGNPQIVLLDEPSSGMDPKSKQRMWRAMRAAFRNRQRGAILTTH
YMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKYGRGYSLEVKLREELTGLQQVALLHTEI
LRIFPHAVRQESFTTLMVYKIPMEDVRSLSQAFSQLESAKQTFNFEEFNFSQSTLEQVFL
EFAKQQESDEEEVGSVSTTFQWQRLQQEANHADSIVHQL
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacgccggcagcatgcagccgatgatcagaagagatgccggagtctggacccaa
acacggagcctcctgtacaagaacctgctcatcaaatggagaaccaagcagcagagcctc
caggagctgatcctccctctgctgctcctggctctcctgatcctcatcagcaccttgaat
ccccacgtttattatgggggcatcagcacggtggagctggacagcgacgtccacctccag
aacatcaagggtctgggctacacccccatcacaaacgtcaccactcacatcatggaggag
gtggcccgggagatcaacatgctggaccatctggacatgttttccagcgaggaggagctg
gagaacgccagcctgtacgagccctccagctacgtgggcgtggtgttcatggacggctct
gccacgtcgtacaaactgcgctttccctacaacaagctgcccctgcccagcgattacacc
gagtccatcgccagctgttacagcagcttggtgaactgcagagctgccaactactggtta
tctggcttcacccgcctccagtctctgatcgacgtagccatcatccagatgcagaccaga
cgcttggtgtggagcgagctgaacctgaatgtggtgatgatgggccagccgggctccgtg
gaggtgcacaagttcccccatgcgctcatctccatctacctggtcctggcgttcacgccc
tttgtcacctttctcatcgtcaacgtggcagccgagaaggagcaccgtctcaaagacacc
atgaccatgatggggctctacgacacggccttctggttgtcctgggggcttctgtacgcc
gctctggtgaccgccatgtccttcctgatggccatcatcgccacgctcacagctctgttc
cccaacagtgacttcttcgtcatctttgtcctcatcttcctctacgggatctcatctatc
tttttctccttcatgttgaccccgctgtttaagaagcccaagtttgcgagcaccgtgggc
tccatgctcacggttgtgttcggctgcatgtcgctcttcaccgtgctgatgaaggacttc
ccacagccgctggtctggctcctctgcctgctctcccccagcgccttctccatcgggatc
gcacaggtggtttacctggaggcccagggagacggtgctgtgttctcctctttgaccaac
ggtcctcatcctctgtacgtccctctgctcatgctgttcctggactgcgttctctacctt
ctgctggctatctacctggaccaggtgctcccaggggactttggactgaggaggtccctg
gtctacttcctgaagccgtcctattggtccaaacacaggaagcgttacgtggaagtgagc
tcagcttatgatgctgaagtgaacggcggtcctggtggagaagaatatgtcgaacccgtt
tcccccgagttcagagggagagaagccatccgcatcagcaacatccggaaagtctacaag
gacaaggacaacatggtggaagctctgaggggcctgaccttcgacatctacgagggtcag
atcacggcgctgctgggacacagcggcgctggaaagtccactctcatgaacattctgtgt
ggcatctgtccacccaccagcggctcggccaccatctacggctctcctgtggccgagatc
gcagaggggtctgagatgaagcagctggtggggatctgccctcagttcaacatcatcttc
gatgttctcaccgtggaggagcacctgaggatctttgcagccatcaaagggatctcacac
gcagacattgatgctgaggtctccaaggttctgaaggatctggacctggagaagatcatg
acggctcaggccaagaacctgagcggaggccagaagaggaaactgtctgtgggcatcgcc
atcctcggagacccaaagattctgctcctggacgagcccacagcagggatggacccctgc
tccagacatcaggtctggtctctgctgaagagccggcagcctggacgagtgattgtcctc
agcacccactacatggacgaggcggacatcctggcagatcgtaaagctgtgatctctcag
gggcagctcaagtgcctcggctcttctctttacctgaagatcaagtgtggcgttggatat
catctccggatgtcgatcgccgagggctgcgacgcagagaaggtctcgtctctgatccag
ctgcacgtccccaaagccgagctgtcccgacggcacgaggccgagctgaccttcacgctg
cctttggagagcgtggacacgtttccagacttgtttacggagctcgactcacagccgagg
ctggggataatcaattatggcgtttccatgacgacgctggaggacgtgttccttcgtttg
gaggcagaagctgaagtggatcaggcagactacagcgtgtttcaccgggagcaggcggac
gacgaatgtgacgccgcctctctggatgaaacggaccagcgcctgctcaccttctcggac
aacaagtccgacgtggtgtcgggtcacgctctgtggcggcagcagttcagcaccgtggcg
tggctgcacatgctcaacatgcgccgcgagtggaaggccttcgtttataccctggtcttg
ttcctgctgttcgtcgctgcggtcctcgtcgtctctctggccacagggaacatccagatt
cactctccagaacgtcagttcctgccggtctacctcctgaagaagaaccaggccgcccac
agatacacctccgccctgctggttcagaacacgtcagactcggacatctctgacttcatc
aacaacctggaatcccaggatatcaaggtggagctgatgaagcacagagactacatgtct
gaagctcctcacagcgctgccatcaacgtcaccgggtccaacaagggtttcagatacgtc
gtggccttcaacagcaccaacgttcactctctacccatggtcgtgaacatcctgagcaac
gctctcctcagaggtctcaatggttctgggcagatccgaacctggaccaaaccctttgaa
tatcaaatcccagacgcgacgtcctacgcgctggtgtacatcgaggccatcatgctgggg
atgctggctgctgggatgccggcttactttgccatggatcacacccgggaccgagagatc
aagtgtcgctccacgctgcgtatctccggtctcttaccgtcagcctactggtgcggccag
gcggccgtggacatccccttctactacatcatcctgtcctccatgaacatcatcctcttc
tccttccactctggaaacctgctggggcccagccacctcacctctgtggtcctctgcacc
atcggcttcggtccggccatgatcctcttcacctacgtggtttcctttgggttcactcga
gtccagagcaacagggacttcttctctttcatctccatgatggtgtgtgtggtgtccgcc
tccatcgttcagttgtcgtttgtgaacgataatcccgagctgacgaggatcctgcacaac
gccctgtgtctgctcaaccctctgtacccgctgatgggctgcctgaactgcatcacgaag
gcgaccttcctgccgacgctgtacgaggagaacttcttatggaaaagtctgctcatttca
gttgtagctccgtacctgcagtgcatccttctgctcttcctgctccggtggctggagatc
cgtcacggagggcgggcgctgaagagcgaccagctctgcaggagctcgacaaaacccaga
cccaaagcagagcgggtccttgaggaagaactgaacgaggatgaggatgttcagatagag
aaggcccgcgtgaaggaggcgctcagctgtcagtcctgtgaagagaagccggctgtggtg
gtgagtcacctgaggaagcagtacactggcaggaaagaaggcttttcttttggcaagaag
actaaagtggccgcaaagaacatttctttctgtgtccgcaaaggggaggtcctcggactg
ctgggccccaacggagcaggaaagagcaccgtcatgcacatgctgtcaggtgacaccgag
cccacagcaggacagattctgatgggagactacagcaccgagttcagtccggtggacagt
cctctggaccatgtggggtattgtcctcaggtcaaccctctgtggccccgggtcactctg
caggaacacctggagatctacgccgccatcaagggtctgaaaggacacgacgtccccgac
atcatcaaacgagtgtcaaacgctctggagctgaaggatcatttgaacaaacagacaaag
actctctcagctggactcaaacggaagctgtgttttgctctcagtatgatcgggaatcct
cagatcgttttactggatgaaccgtcgtcaggaatggatcctaaatccaaacagcgcatg
tggcgggccatgcgtgctgcgttcaggaaccgtcagagaggagccattctcaccacacac
tacatggaggaggccgaggccgtctgcgaccgcgtggccatcatggtttcgggccagctg
aggtgcatcggctccatccaacacctgaaggggaagtacggccgaggctacagcctggag
gtgaagctgagggaggagctgacgggcctccagcaggtggcgctgctgcacacagagatc
cttcgaatcttccctcacgctgtccggcaggagagcttcaccactctgatggtttataag
atccccatggaggacgtcaggtctctgtcccaggccttctcccagttagagagtgccaaa
caaacgttcaactttgaggagttcaacttctctcagtccactttggagcaggtgttcctg
gagtttgccaagcaacaggagagtgatgaggaggaggtgggttctgtcagcaccaccttc
cagtggcagcggctgcagcaggaggcaaaccacgccgacagcattgtccatcagctctga
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integrated database retrieval system
