Nematolebias whitei (Rio pearlfish): 119424277
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Entry
119424277 CDS
T08042
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nwh00535
]
119424277
04091 Lectins [BR:
nwh04091
]
119424277
Proteoglycans [BR:
nwh00535
]
Cell surface proteoglycans
Others
119424277
Lectins [BR:
nwh04091
]
C-Type lectins
Others
119424277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DUF4381
TMEM154
MMU163
Ly49
Motif
Other DBs
NCBI-GeneID:
119424277
NCBI-ProteinID:
XP_037547665
LinkDB
All DBs
Position
18:33975590..33994611
Genome browser
AA seq
2563 aa
AA seq
DB search
MGRLLADLFILLLISGHVHGVSFYGRSYIHLQTVEKSIQTLIHVRFQTSSQSGLLFLAAG
SRDFWLLELISGHLQVRLNLGSGERFLRSEKGIRLNDLVWHTVDLNHTHHNISMIVDRTS
RTNLQMPGPDLELSVEDGLLVGGTARLNHPYLRNITTGFRGCMDEFVFNDHNLLSNLKQK
SEYKSIHEISMGCSPQFSATEEDPVNFFSSKAFILLPRWEVLQEGTFECELYTSTKEENG
MVLYSSGSEGGFVTIEIRDGHLVASVGNGRESKTELRSLTRVHSNQSWYTIQLHLLPHSV
QLKVGKELVKASLSQELQGIQLHGPFFLGGLNADALENTGLPFVPLKGRVEGSFKGCLRN
IRVNSQKTGLPHAIVTKDITVGCSIGQAPKTVIILNPTDPPEFDPTATQEVSQTVLLIRT
LEVAEGGQVLLEPKHLKVSLDFRKLGISPSQLVFRIEEHPVHGQLRLNLGPNPDRLPDEK
QERNITVGAEEKDWTFSLLDLKQGRVMYVHSGSEGTSDFFTFSVFSSNKKELPMFLKDNH
LHRFDISISPVNDAPLLSLPQGNLFTLLEKSKRKLTTDVLSVSDPDSSSEELFFSSMGNL
NAQAGYLEHHDYPGRVINLFSLNDLQEGKISFVHTGVSASRLALRVSDGQRVSNTVVLRI
IVVKLEYRLVNNTGLKVNQGEASIITTGHLAVSVNVADNTVDIWYDVTELPKYGEIQRLH
SSGDWKSTTFFSQKLLERKKIQYVSTYHGIQTQNITDHFKCRVIINSQPKEEVVFPIEVQ
WVQLKVTRSKMEINGLETAVLTSEDLHVISKGVKLSEGNIFFRLLTVPKKGQLFLNRKLL
QRNSTFSQKNITDGLVKYELFNRLHDDTRDSFSFQVFSLHAASTPYDFRINIKAESTAIT
IVNKGLSILEGASKVITKDVLFTHTASTLEIYYNVTVSPKYGQIRKINLSNSTSINDNVV
KFTNQDITEERIMYVHDDSETKQDRFMFQVIVLKPHKHTNKKEDITTVEQAFNISIQLVN
DQRPVRVVDKIFHVARDGQRLVTLNDLCYRDDDSDFEDSWLVYTRRGIPMGELVLASDPS
HRLYEFTQRDIEQNKLLFIHSGVSLGRFVLFVTDGKHYVSALLEVMAQDPYLQVENSTGL
MVQQGGITSLTSTNLSVTSNLDIRDPQEVTFEVFIPPKHGVLCFNDGLRETIIGTDAISV
FTQGDLVAGRLAYHHSGNNELLDVFNVTARARERSTERRTERGRREVHLDIGVPVKVYLE
SHQRPPTVKNNHPVVVEEGQNVSISREHLEVVHPDSQPSEMIFTVLNSPAVGIIYKLSAG
KKDHHVKGEKQHLHKSSVRDIKEHPLTSFTQEDLNQGLIIYDHQAAGYCNDSVLLEATNG
VTKVGPIRLLIDIIPTLLPLQVSNLILDEGMSQPLTSEIIKVASHHFSGMNFLYQVIVPP
RFGHLEHSRIPGMPINAFTHTEVEHEYISYVHDGSETLTDNFTIMANQTELKKHSLPCII
HINVSPVNDETPVVTTNQGLKVWVGSVTEITTNELSAEDSDTPPEGLEFIITPPSNGHLA
LKSAPSRHILNFTQTHIQSKQMVFVHNGPLSGGFHFQVNDGVNVAPRQIFSTTAHALVLS
LQRNHPMEVYPGSVTLISDQELQVVTNNNSDIKRNQPVTYAVTSPPKLGRLVQRMHDNSF
RNISTFTQSMVNDGVILYDQNKPETVGWSASDSFSFTVTSPPAFLPPHTFSILISYQANE
HQGNPQHKTRLLNNAGAVVKEGGSVTIDRYKLDASYLLGNVPESQRKKHHVMYRVISLPR
HGVLSIQGHHLTRNQPDFSQATLNKFGITYVHDDSETTSDSFTFRAWAAPFHHSSSSQSS
PMSVFSLDSSSSLLFSPLHLASASSFPSLGNVSHRHPVKDRVTVTETFNITVTPVNDHPP
LIRSRAPSMKVVVGERVVLGPDHLQVEDHDTPPEELHYFVISKPNNGYLTLGERPESVTS
FTQYDVNHGRLHFIQQGESSTGVFYFNVTDGHHRPVYKLFSLEVIKPTVSMVNNTGLSLV
QGRTAVVLTTNQLAAQTNGQRQANISYTVTTHPFHGRIAINDQEVITFCHEDLQFGHVVY
HMTDLSASEDSFQISVSASSLGVDYGTLPGQTVNVTVRPLVYLREPIRVPSGIAVKLGKA
MIDASDLARISRVNPVFEVLSPPKHGKLVKITYDLDEAAEDLKTFTFRDVVQGRVAIEET
LSDSDNQLNINESRVTTARGNAPATPLNDSFTFLLKAGNVQPAKGELHFTIFPHRQMRHG
SRISNKVDTSSSSHERTTTRFQTHNRTTTRGGQGTSVTDGVAGDGLQPHILSQRKQNKTQ
HKVKSHNRSGNHTRSGTHGGRSGIIPEGAEKGSSHTPQPHTPPVPETHTPMNHPNTDLVH
VQILPRPSSDPLLIILPLLACLLLIIILVVVILVFRHRKEKQARQQLMQELAAVQLPTED
SLYLGRPERSMAMPNVMVTPLGSASCPTSPRIPLSPRRSLAPGMTFWGPFESDLLGGDGH
IRGFDNNERNNNTCCNSPPDSPAVFTWRSRSSIPSLKDNQYWV
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggcttttggctgacttgttcattctcctgctgatttctgggcacgttcatgga
gtttccttctatggcagaagctacattcacctgcagacagtggagaagtccattcagacg
ttaatccatgtacgatttcaaacctccagccagtccgggctgctgtttttagctgcagga
agcagagacttttggcttttggagctgatctctggacacctgcaggtgcgcctaaacctg
ggctcaggtgagcgtttcctgcgctcagaaaagggcatccgtcttaatgatcttgtgtgg
cacacagtggacctaaaccacacacaccacaatatcagcatgatagtggaccgaacctct
cgcacaaatctccaaatgccaggaccagatctggagctcagtgttgaagatgggctcctc
gttggtgggaccgccagactgaaccacccgtaccttcgaaatatcacaactgggtttaga
ggttgcatggatgaatttgtcttcaatgatcacaacctactgtccaatctcaagcagaaa
tctgaatacaaaagcatccacgagatatctatgggttgtagtccacagttttcagcaaca
gaagaagatcctgtgaattttttcagctctaaagcctttattttgctcccacgatgggaa
gttcttcaagaggggacattcgaatgtgaactgtacacctccacaaaagaagaaaatggc
atggtcttgtatagctctggaagtgagggagggtttgtaaccattgagataagagatggt
cacctagtggcttcagttggaaatggaagagagagtaaaactgagttgcgttccttgaca
cgtgtccacagcaaccagtcctggtacaccatccagctgcacttgctgcctcatagtgtc
cagctgaaagtaggtaaggagttggtgaaggccagcctgagtcaggagcttcagggcatc
caactccatgggcctttctttcttggaggactaaatgctgatgcactagaaaacacagga
ttgccttttgtgccattaaaaggaagagtagaaggctcctttaaaggatgccttcgaaac
attagagtaaactctcagaaaactggcttacctcatgccatagtcaccaaagacattact
gtgggctgtagcatagggcaagctccaaagacagtgatcatcttaaacccaacagatcct
cctgagtttgatccaacagccacacaggaagtcagccagactgttttgttgatacgaaca
ctggaagtagccgaaggaggtcaggtcctgctggaacccaaacatttaaaggtgagtctg
gatttccgtaaacttgggatctctccatcacagttagtgttccgcatagaggagcatccg
gttcacggccagctccgtctgaacctcggtccaaatccagataggttgcctgatgaaaag
caggagagaaatattacagtgggcgcagaggaaaaggattggacgttcagtctgctggac
ttgaagcagggccgggttatgtacgtccacagtggctcagagggcacgagtgacttcttt
acattttcagttttctccagcaataagaaggagcttccaatgtttctgaaggacaatcat
ctgcaccggtttgatatcagcataagtcccgttaatgatgctcctctccttagcttgcct
cagggaaacctttttactctgctggagaagtccaaacgaaagttgacaacagatgtgctg
agtgtgtcagacccagacagcagttctgaagagctgtttttcagctccatgggtaacctc
aacgctcaagctgggtaccttgagcaccatgattaccctggcagggttatcaacttgttc
tctctaaacgatctgcaggagggtaagattagctttgtgcacactggagtttctgcctcc
aggctggcactcagggtcagtgacgggcaaagggtgagcaacacagtagttttaaggatc
attgtagtaaaacttgaataccgactggtgaacaatactggactaaaggtaaaccaaggc
gaagcttccatcattaccactggtcaccttgcagtaagtgttaatgtggcagataacact
gtagatatctggtatgatgtcacagagttgcccaaatatggtgagattcagaggctacac
tcaagtggtgactggaaatcaactaccttcttctcacaaaaacttttagagaggaaaaag
atccaatatgtaagcacctaccatggcatccagacgcagaacatcactgatcacttcaaa
tgtagggttatcattaactctcaacccaaagaggaggttgtattccccatagaggtacag
tgggttcagttgaaggtgacacgaagcaagatggaaatcaacggccttgagactgctgtt
cttacttctgaagacctccatgtgatttctaagggtgttaaactcagtgagggcaatatc
ttcttccggctgctgacggtaccaaagaaagggcagctgttcctcaaccgaaagcttctg
caaaggaactcaacctttagccagaagaacatcacggatggtttggtgaagtacgaactc
ttcaacaggttgcacgatgacacaagagactccttcagctttcaggtgttttcgttgcac
gccgcctccacaccgtatgacttcagaatcaacatcaaagctgagtcgactgccatcacc
atcgtgaacaaaggtctttccatattggaaggagcaagcaaagtcatcactaaggacgtt
ttgttcactcacacagcgagtactctggagatctattacaacgttacagtgagtccgaaa
tatgggcagatacgaaagatcaacctgtccaactcaacttcaatcaatgacaacgttgtg
aagttcacaaatcaagatatcactgaggagcggatcatgtacgttcacgatgacagtgag
accaagcaggatcgctttatgtttcaagttattgttttgaaaccacacaaacacacaaac
aagaaagaggacataaccacagtggaacaagcctttaatatttctatacagctcgtcaat
gatcagcgacctgttagggttgtggataaaattttccatgtggctcgtgatggacaaagg
ctggtgacgttaaatgatctatgctaccgtgatgatgactctgactttgaggacagctgg
ctggtctacacacggaggggcattccgatgggggagttggtgctggccagtgatcccagt
catcggctgtacgagttcacgcagcgtgacatcgagcagaataagttgttgtttatccac
agcggggtgagtttaggacgttttgtccttttcgtaacagatgggaaacattatgtttca
gctctactagaggtgatggcacaggatccgtacctgcaagtggagaacagcactggttta
atggtccagcagggtggcataacatccctgacttctactaatctcagtgtcaccagcaac
cttgacatccgagacccccaggaggtgacgtttgaggtctttattccacctaaacatgga
gtgctctgcttcaatgatggactgagggagaccataataggaacagatgccatttcagtg
ttcacccagggagacctggtggcagggcgcttagcgtaccatcacagtggaaacaatgag
ctgttggatgtcttcaatgtgaccgcaagagcaagagaaaggagcacagaaaggcgtaca
gaaagagggaggagggaagtacacctggatatcggcgtgcctgtaaaagtgtacctggag
agtcatcagagacctccgactgtgaaaaacaaccatccagttgtggtggaagagggacaa
aacgtctctataagtagggaacatctagaggtggtgcacccggacagtcagccctcagag
atgatatttacggtcttaaactctcctgcagtgggcatcatttataaattatctgctggc
aaaaaggatcatcatgtaaaaggagaaaagcagcacctacataagtcctctgtccgggat
atcaaggagcaccctttaacatccttcacccaagaggatctcaatcagggattaatcatc
tatgatcatcaggctgcaggatactgtaatgactctgttctgttggaggcaaccaatggg
gtaacaaaggttggcccgatcagactgctcattgatatcataccaacccttcttccctta
caggtgtctaacttgatccttgacgaaggcatgtcccagcctctcacttctgagatcatc
aaggttgcaagtcatcacttctcagggatgaattttttgtaccaagtaatcgttccacca
agatttggacacttggagcacagccggattccagggatgcctatcaatgcttttacacac
actgaggtagaacatgagtacatctcctatgttcatgatggcagtgagacactgacggac
aactttaccatcatggccaaccagacagaattaaaaaagcacagcctgccatgcatcatt
cacatcaatgtctcaccagtcaatgatgagactcctgtcgtcacaaccaaccaaggcctg
aaggtgtgggtgggttcagtaacagagataaccacaaatgaactgagtgcagaagactct
gacacaccacctgaggggctggaattcattatcacaccccccagcaatggacacttggct
ctgaagagtgctccctcccgacacattctgaacttcacccaaactcacattcaaagcaaa
cagatggtgtttgtacacaatggtccattatcaggtggttttcactttcaggtgaatgat
ggagtgaatgttgctcctcgtcagatcttcagcacaactgctcatgctttggttctctcc
ttgcagagaaaccatcccatggaggtctacccaggctctgtcacactgatttcagaccag
gagcttcaggttgtaacaaacaacaacagtgacatcaaaagaaaccagcctgtaacatat
gctgtgacttctcctcctaaactcggccgccttgtccaacgaatgcatgacaactctttc
agaaatatttctacatttactcagagcatggtgaatgatggtgttatactgtatgatcag
aacaagccagagacagtcgggtggtcagcatcagactctttttctttcactgtaacttct
ccgcctgcttttcttcctccacacactttttccatcttaatttcctaccaagctaatgag
catcagggcaaccctcaacacaagaccagacttctgaacaatgcaggtgctgtggtgaaa
gaaggaggcagtgtgacaattgatcgttacaagttggatgcttcttatctgctgggtaat
gttccagagtcccagagaaaaaaacaccatgtcatgtatcgagtgatttctctgccccga
catggagtgctgtctatacagggacaccatctcaccagaaaccaaccagatttctcccaa
gctaccctgaacaagtttggcatcacatatgtccatgatgactcggagacgacaagcgac
agcttcacttttagggcctgggcggctcctttccaccactcttcctcttcccaatcatca
cccatgtctgttttttccttggattcctcgtcgtctttgttattttcccctcttcatttg
gcatcagcatcctcctttccatcacttggcaatgtttctcatcgtcatcctgtgaaagac
cgagtgactgtgacagagacatttaacatcacagtgacgccggtcaatgaccatccaccg
ttgatcagaagcagagcacccagtatgaaagttgtggttggagaaagagttgttcttgga
ccagatcatcttcaggttgaagaccatgatacaccaccagaggagctgcactactttgta
atcagcaagcccaacaatggttacctgactttgggagaaagaccagaatcagtcacctct
tttactcagtatgatgtcaaccatggccgactacattttattcagcagggtgaatcctca
acaggagttttctatttcaatgttactgatggtcatcaccgtccggtctacaaattgttt
agcttagaggtgattaaacccactgtatccatggtgaacaacactgggctgtcattggtt
caaggtcgcaccgccgttgttctgacaaccaaccagctggcagctcaaaccaatggtcaa
agacaggccaacatctcctacacggttaccacacacccctttcatggacgcattgctata
aacgaccaagaggtgatcaccttctgccatgaggatctccagtttggtcatgtggtttat
cacatgacagatcttagtgcatcagaggacagctttcagatctcagtgtcagcatcatct
cttggtgtagattatgggactttaccagggcagaccgtgaatgtgactgtgcgacctctg
gtctacttgagagaacccattagagttccaagtggcattgctgtgaaactggggaaagcc
atgattgatgcctccgacttggccagaataagtagagtcaacccagtttttgaggttctg
tctccaccaaaacatgggaaactagtcaagattacctatgaccttgacgaagcggcagag
gacctgaagacatttacgttcagagatgttgttcaaggcagagttgccatcgaagagacc
ctcagtgactctgacaaccagcttaacattaatgaatccagagtcacaacagctcgaggc
aatgcacctgccacacctctcaatgattcctttaccttcttgttgaaggctggaaatgtc
cagccagcaaagggcgagcttcacttcaccatttttccccatcgccaaatgcgtcatggc
tcaagaatttcaaataaagtggatactagtagttcaagtcatgaacgcacgacaacccgt
ttccagacacacaacaggactacaacaagaggtggacaaggaacatctgtaacagacggt
gtggccggggatggtttgcaacctcacattttgtcacaaagaaaacaaaacaagacccag
cataaggtgaagtctcataaccgctcggggaaccacacacgcagcgggacccatggaggg
agatcggggatcattccagagggagcagaaaagggcagcagtcataccccacaacctcac
actcctcctgtcccagagacacacactcctatgaaccatccaaacacagacctggttcat
gttcagattctccctcgcccttcctctgatccacttcttattatcttgccactgctggcc
tgtttgcttctcatcataatccttgtggttgtgatcctggtgttccgccaccgcaaagag
aaacaggctcggcagcagctaatgcaagaactggctgcagtgcagttacccacggaggac
agcctttacctgggacggccagaacgcagtatggctatgcccaatgtgatggtcacccca
cttggctctgcaagctgcccaacttcccccaggataccattgagtccgaggaggagtctg
gctcctggaatgaccttctgggggccatttgaatctgatttattgggtggagatggacat
attagagggtttgacaataatgaaagaaacaataatacttgttgtaattcaccaccagat
tctcctgctgtattcacctggagatctcggtcctctattccatctcttaaagacaatcag
tactgggtttag
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integrated database retrieval system
