Nematolebias whitei (Rio pearlfish): 119424325
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Entry
119424325 CDS
T08042
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04020
Calcium signaling pathway
nwh04080
Neuroactive ligand-receptor interaction
nwh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119424325 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119424325 (grin1a)
04082 Neuroactive ligand signaling
119424325 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119424325 (grin1a)
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Glutamate (ionotropic)
119424325 (grin1a)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
119424325
NCBI-ProteinID:
XP_037547713
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All DBs
Position
18:37918308..37966146
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AA seq
901 aa
AA seq
DB search
MRLFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVNQANLVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSSDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSFDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIALQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLVQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTQQDGTCKEEITLNGVLIKKVICTGPNETIPGRPTVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQQFPPTDATGQLNLSDPSVSTV
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggccgtgctcctctcgtgctcctgcgcgcgggccggctgcgag
cccaagatcgtcaacatcggggccgtcctgagccagaagaggtacgagcaggtcttcaag
gacgccgtgaaccaggccaacctggtctacggccgggacaagttcaagctgaccgccatc
tcggtgacgcacaagcccaacgccatccagatggctctgtcggtgtgcgaggacctgatc
tccagccaggtctatgccatcctggtgagtcaccctcctcagtccagcgaccacctcact
cccacgccggtctcctacaccgcaggcttctaccgcatccccgtggtcggcctcaccacc
cgcatgtccatctactctgacaagagtatccacctgtcctttctgcggaccgtccccccc
tactcccaccaggcgcacgtttggttcgacctgatgcgcgagttcaactggaaccacatc
atcctgatcgtgagcgacgaccacgagggccgggccgctcagaagaggctcgagaccctc
ctggaggaaagggaaaccaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tttgacaacaagcgaggacctaaggcagagaaagtcctacagttcagtcaggagactaac
ctaaccgccctgctgctggaggccaaggagctggaggcccgcgtcatcatcctgtccgcc
agcgaggaggacgccgccgccgtgtacaaggccgcccgcttcctgaacatgacgggctcg
ggctacgtgtggctggtgggcgagcgggagatgtcgggtaaagccctgagtgaggcgccg
gacggtctgatcgccctccagctcatcaacgggaagaacgagtcggctcacatcaacgac
gccgtggccgtggtggcccagtccatccaggagctgttcgagaaggagaacatcaccgaa
cctccgaggggctgcgtgggcaacaccaacatctggaaaaccggacccctctttaaacgg
gtgctgatgtcgtctaaatacccagaaggcctcacgggacgagttgagttcaacgatgac
ggagacaggaagtacgcacactacagcatccttaactaccagaagtctcgccttgttcaa
gtcggcatttacaacggaactcaggtggtgatgaacaatcagcgcaagatcatctggccc
ggaggggagaccgagaaaccgcagggcttccagatgtccactcgattaaagattgtgacc
atccaccaggagccatttgtctacgtgaaacccactcagcaggatgggacatgcaaggag
gaaattacattaaacggagtcctgattaaaaaggtcatctgcacgggccccaatgagact
attccaggacgcccgaccgtgccccagtgttgctacggtttctgcatcgacctcctgatc
aagttggccatgaccatgaactttacctacgaggtgcatctggtggctgatgggaagttt
ggaactcaagaacgggtgaacaacagcaacaagaaagagtggaacggcatgatgggcgag
ctgctgggaggcctggctgacatgattgttgccccgctgactataaacaacgaacgggcc
caatacatcgagttctccaaaccctttaaatatcaaggactcactattcttgtcaaaaag
gaaatccctcgaagtacgctggactcatttatgcaaccgttccaaagcacattgtggctg
ttggtgggtctttcggtgcatgtggtggcggtgatgctttaccttctagaccggttcagt
ccatttgggagatttaaagtaaacagtgaagaggaagaagaagatgccctcaccttgtcg
tctgctatgtggttctcctggggggtgttgctgaactctggaataggagaaggtgcacca
cgcagcttctcagcgagaatcctgggcatggtgtgggctggttttgctatgatcattgtg
gcttcctatactgccaacctggctgccttcttggtgttggaccggcctgaggagcgcatc
accggcatcaacgacccaaggttgagaaacccatctgacaaattcatctacgccacggta
aagcaaagctccgtggacatctacttccggcgacaggtggagcttagtactatgtatcgc
cacatggagaagcacaactatgagagtgccgccgaggctatccaggccgtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaatggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcacggagcaatgcc
ccagccacactcacctttgaaaacatggcaggggtcttcatgctggtggctggtggcatc
gcagcaggaatcttcctcatctttatcgaaatcgcttataagcgccataaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaacgtttggaggaagaacttgcagcag
ttcccaccgactgacgccacgggccaactcaacctgtctgacccgtccgtcagcaccgtg
gtgtaa
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