Nematolebias whitei (Rio pearlfish): 119424482
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Entry
119424482 CDS
T08042
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119424482 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119424482 (dcp2)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
119424482 (dcp2)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119424482 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
119424482 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
119424482
NCBI-ProteinID:
XP_037547896
LinkDB
All DBs
Position
18:complement(20354102..20375005)
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AA seq
281 aa
AA seq
DB search
MFSTNMETKRVDIPSSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNTP
GAPHCGIRDFAKAVFHHCPFLLPHGEDVQKVLEQWKEYKMGVPTYGAIILDESLENVLLV
QGYLAKSGWGFPKGKVNEDEAPHDCAVREVLEETGFDIKNLICKDMYIEQKITDQLVRLY
IIPGVSKDTKFNPKTRKEIRNIEWFSIEKLPCHRNDMTPKSQLGLAPNRFFMTIPFMRSK
KKSVLKGSGKKVQDSPCVKKGSSDIKFNNQQVETISWRNLK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaccaacatggaaacaaaaagagtggacatcccctccagcgttctggacgat
ctgtgcagccggttcatccttcacatccccagtgaggagcgggacaatgctatcagagtg
tgcttccagattgagctggcccattggttctacctggacttctgcatgcagaacactcca
ggagcacctcactgtgggatcagagactttgccaaagctgttttccatcattgtcccttt
ttgctgcctcatggagaagatgtgcagaaggttctcgagcagtggaaggagtacaagatg
ggtgtaccgacttatggtgcgattattcttgacgaatcactagagaatgtattacttgtt
cagggctaccttgcaaaatctggctggggctttccaaaggggaaagtgaacgaggatgaa
gctccccatgactgtgcagttcgtgaagttttggaggagacgggctttgatatcaagaat
ctgatctgtaaggacatgtacatcgaacagaagatcacggaccagttggtgcggctctat
atcataccaggggtgtccaaggatacaaagtttaaccctaaaacaagaaaagagatcaga
aatattgaatggttttctattgagaagctgccctgtcaccgaaatgatatgaccccaaag
tctcaacttggactggctcctaacaggtttttcatgaccattccattcatgagaagtaaa
aagaaatctgttttgaaaggcagtgggaagaaagtccaggactctccttgtgtcaagaaa
ggatccagcgacatcaagttcaacaaccagcaggtagaaacgataagctggagaaattta
aagtga
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