Nematolebias whitei (Rio pearlfish): 119424505
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Entry
119424505 CDS
T08042
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119424505 (lrp4)
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119424505 (lrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
SGL
Vgb_lyase
EGF_LRP2
cEGF
DUF5050
EGF_CA
EGF
DUF202
Motif
Other DBs
NCBI-GeneID:
119424505
NCBI-ProteinID:
XP_037547920
LinkDB
All DBs
Position
2:43329372..43782743
Genome browser
AA seq
1529 aa
AA seq
DB search
MVRGLVQCTCHTGYRLTDDSKTCQDVDECAEEGYCSQGCTNIEGGFQCWCVQGYELRPDK
RSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHSRELVFWSDVTLD
RIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLLW
QSMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRRVIADTHLFWPNGLTIDYASH
RIYWVDAKHHVIERADLDGRNRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFT
GKNQEVIRNKLHFPMDIHTLHPQRQPAGGRNRCGTNNGGCSHLCLPSNKTYTCTCPTGFK
KVDHYSCAKSLDKFLLFARRTDIRRISFDTEDMSDDVIPLADVRNAVALDWHDKDGYIYW
TDVTTDSINRALWNGTKQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVSNADGSM
RTVLIWENLDRPRDIVVDPTGGFMYWTDWGANPKIERAGMDASNRIVIISSNLTWPNGLA
IDYETKRLYWADAGMKTIEYGNFDGSDRQVLIGSQLPHPFGLTVHEDKLYWTDWLSKSIH
SADKLTGLEHHTLAENLENLMDIHMFHQHRETVHNPCSVSNGGCSHLCLLAPAPMASSCS
CPTGINLQSDGKTCTPGMSSFLIFARRTDIRMVSLDIPYFADVVLAVNSSMKNTIAIGVD
PKEGKVYWSDSTLKKISRANINGSAQQDLVSTGLMTTDGLAVDAVGRKIYWTDTGTNRIE
VANLDGSMRKVLIWQNLDSPRAIALYHEMGYMYWTDWGEHAKLERSAMDGSDRVVLISNN
LGWPNGLAIDTAGSQLLWADAHTERIEASDLNGQNRHTLITPVQHPYGLTLLGSHIYWTD
WQSRSIQRADKNSGANTITVRANLPGLMDIQAVDREKATGFNKCSKRNGGCTHLCLPRPN
GTSCACPTGILLKGDGRSCDDSPETYLLFSNRVSVRRISLDTSDHTDVHVPVPELHNVIS
LDYDSVDGKLYYTDVTLDVIRRANLDGSDMETVISQGLKTTDGLAVDWVSRNMYWTDTGR
NTIEVARLDGTSRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIAKIERSQLDGSDRKVL
INMDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQVLISPVSHPFALTQQDRWI
YWTDWQTKSIQRVDKHTGRNKETVLSNVEGLMDIIVVSPHRQTGTNHCGANNGRCTHLCF
AKTNSFVCACPDEPDGRPCSTISGYVPTSPAKGASSTPAPKRFPKPPTDTPHRGPPLVNC
TDKNLNAEGCLSTVVTAPHGESLHISYVIGGVLTILAILILIAAFIIYRHKKSKFAEPGV
SNLTYSNPSYRTSTQEVKIEASQKPPIYNQLRYKKEGGVDGGYTKEKIRIVEGVCLLSNE
ELYWDDLKQIKPSRGGLHTCIRTDTVSLQASSASLDDGETEQLLQEEASECSSITTLTPS
AITPQRHAQHSLPDTGWASIRKPSTESEV
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atggtccgaggactggtccagtgcacctgtcacacgggataccgactgactgacgacagc
aagacctgccaagatgtggatgagtgtgctgaggaaggatactgcagtcagggctgtacc
aacattgaaggggggttccagtgctggtgtgtccagggctatgagctccgacccgacaag
cgcagctgcaaagctctaggtccagagccagtgctactttttgccaaccgcattgacatc
cgtcaggttttgccacatcgctctgaatacaccctgttgctcaacaacttggaaaatgca
atcgctcttgacttccatcacagccgggagctggtcttctggtcggatgtgacgctagac
cgcatcatgaaggccaacctaaacggctctaatgtggaggaggttgtctccactggtctg
gagagcccaggtggactggctatagactggatccatgataagctttactggacagactct
gggacgtcccgtattgaggtggctaatttggatgggacacaccgcaaggtgttgctctgg
cagagtatggagaagcccagagccattgcactgcaccccatagagggtaagatctactgg
acggactggggcaacactcctcgcatcgagtacgccaacatggacggctcgaaccggcga
gtcatcgcagacacacacctgttctggcccaacgggctcaccattgattatgccagccat
cgcatatactgggtggatgccaagcatcacgtcatcgaaagagctgacttagatggacgc
aaccgcaaggctgtcatcagccaaggcctccctcatccatttgccatcacagtgtttgag
gacagcctctactggacggactggcataccaagagcataaacagcgccaacaaattcacc
ggcaagaaccaggaggtgatccggaataaactgcacttccccatggacatccacaccctg
cacccccagagacagcctgcaggtggcagaaaccgctgtggcaccaacaatggaggctgc
agccacctgtgtcttcccagcaacaaaacctacacctgcacctgtcccactggcttcaag
aaggtggatcactacagctgtgccaagagtcttgacaagttcctgctttttgcccgaagg
acggacatccgacgaatcagctttgataccgaggacatgtccgatgatgtcatccctctg
gctgatgtgcgcaacgctgtggcgctggactggcacgacaaagatggctacatttactgg
acggacgtcacaaccgactccattaacagagcactgtggaacggcaccaagcaggaggtg
gtggtggataccagtttggagagcccagcaggactggcaattgactgggtgaccaataaa
ctttattggaccgatgcaggtacagatcgaatcgaagtttcaaatgctgacgggagcatg
cggaccgttctgatttgggagaacttggatcgacccagggacattgtagttgatccaact
ggaggttttatgtactggactgactggggtgccaatccaaagatcgagcgtgcagggatg
gatgcctctaatcgcattgtcatcatttcatccaatctgacatggcccaatggactcgcc
atcgactacgagaccaaacgtctgtactgggctgatgcaggcatgaagactatagaatat
ggcaactttgatggttcagacagacaggttttgattggcagccagctgcctcaccctttt
ggactcactgtacatgaagacaagctgtactggacagactggttgtccaagagcatccat
agtgccgacaagctcacgggtttggaacaccacacgctggccgaaaacttggagaatctc
atggacattcatatgttccatcagcaccgcgagacagtgcacaacccgtgttcagtcagt
aatggaggctgtagtcacctctgtctcctggctcctgctcccatggcttctagctgttcc
tgtcccactgggatcaacctgcagagcgatggaaagacctgcactcctgggatgagcagc
ttccttatcttcgctcggaggacagacatcaggatggtatctttggatattccttacttc
gccgatgtggttctagccgtcaatagctcaatgaaaaacactattgcgatcggcgtcgac
cccaaagaaggaaaagtctactggtctgacagtactctaaagaaaatcagcagagccaat
atcaacggatcagcgcagcaagacctcgtatctacaggactgatgacaaccgatgggcta
gcggtggacgctgtcggcagaaagatctactggactgacacaggaactaaccgcattgaa
gtggccaacctggatggttcgatgaggaaagttcttatctggcaaaacctggacagccca
cgagcgattgccctctaccatgagatgggttatatgtactggacagactggggcgagcat
gctaagctggagcgctcggcgatggatggatcagaccgtgtggtcctgattagtaacaac
ctgggctggcctaatggtttggctattgacacggcaggatcacagctgctgtgggccgat
gctcacacagagcgcatcgaagcttctgacctaaatggacagaatcgtcacactctgatc
actcctgtccagcacccgtacggtttaacccttttgggatcccatatctactggactgac
tggcagagccgcagtatccagagagcggacaagaactccggagccaacaccatcacagtg
cgagccaacctgccaggcctgatggacattcaagctgtggacagggagaaggcgacgggt
tttaataaatgcagcaaaaggaacggaggttgcactcacctctgcctgcctcgtcccaac
ggcacttcctgtgcgtgtcccactggcatcctgctcaagggcgacggcaggtcgtgtgac
gactcccccgagacctacttgctcttttcaaatcgcgtcagcgtacgcagaatctccctg
gacacgagcgaccacactgacgtgcacgtacccgtgcctgagctgcacaacgtcatctcg
ctcgactacgacagcgtagacggaaagctttactacacggatgtcaccctggatgtgatc
aggcgggcaaacctggatggcagtgacatggaaacggtaatcagccagggtttgaagacc
acagatggtttagctgttgactgggtgtccagaaacatgtactggaccgatactggacgc
aacaccatcgaggtggctcgcctggatggaacgagccgcaaagttctggtgaacaacagt
ttggatgaacctcgagccatcgcagtgttcccaagcaaagggtttctgttctggactgac
tggggccacattgcaaagattgaacgttcccaactggatggatccgatcgtaaagttcta
atcaacatggacctggggtggcccaatggcctcactttagactacgacacacgaaggatc
ttctgggtggacgcccacttggacaggattgaaagttcagatctgaatggaaagctgcgt
caggtcctcatcagtccagtgtctcaccccttcgcccttacgcagcaagatcgttggatc
tactggacggactggcagacaaagtccatccaacgagtggataaacacaccggccggaat
aaggaaactgtgctatccaatgtggaggggctcatggacattatagtggtctctccccac
cggcagacaggcaccaaccattgtggggcaaataatggacgttgcacccacctctgcttt
gccaagaccaacagttttgtttgcgcctgcccagatgaaccagatgggcgaccctgttcc
acaatttcaggttatgtcccaacctctcctgccaaaggtgccagcagcacccctgctcct
aaaaggttccccaaacctccaacagacactccacacagaggacccccactggtcaactgc
actgacaagaacctaaatgctgaaggctgcttgagcacagtggtgacagcccctcacgga
gaaagcctccatatcagctatgtgatcggtggagttctgaccatcctggccattctcatc
ctcatagctgcgttcattatttacagacacaagaagtcaaagttcgctgaaccaggagtg
agcaacctgacctacagtaacccctcgtatcggacctccacacaagaggtcaagatcgaa
gcgtcacagaagcctcccatatacaaccagcttcgatataagaaagaggggggcgtggac
ggaggttacacaaaggagaagattcgtatagtcgagggtgtgtgcctcttgtccaacgaa
gagctttactgggacgacctaaaacagatcaagccgtcccgcggcggcctgcacacctgc
atacgcaccgacaccgtgtccctgcaggccagcagcgcttcactcgacgacggcgagact
gagcagctcctccaggaggaggcatccgagtgctcctctatcaccacgctgaccccctcg
gccatcaccccgcagcgtcacgcccagcacagcctgcctgacactggctgggcttccata
cgcaaaccttccactgagagcgaagtgtga
DBGET
integrated database retrieval system
