Nematolebias whitei (Rio pearlfish): 119424584
Help
Entry
119424584 CDS
T08042
Symbol
whrna
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nwh03037
]
119424584 (whrna)
Cilium and associated proteins [BR:
nwh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
119424584 (whrna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
USH1C_N
DUF6288
PAH_ZNF598
DUF1722
Motif
Other DBs
NCBI-GeneID:
119424584
NCBI-ProteinID:
XP_037548001
LinkDB
All DBs
Position
18:complement(38180228..38318346)
Genome browser
AA seq
944 aa
AA seq
DB search
MSSTDLERMSLSSSANSVASSARTLSANVRKLHHALNLLLSDPEREQFIHCLNVYHAKRN
VYDLVQTLNVILNAPSKRQLLPMLRLVIPRSDQLLFEQYTSEGLYLKSGLVANNGNAEQP
PPAAGSPTPAGHLHPSIPPDFQVALRGSPDSFSTSSDGTAPLVPLLGSNFIHEPPGELRQ
VTMKRHKSHEGLGFSIRGGSEHGVGIYVSLVEPGSLAERQGLRVGDQIVKVNDKVFDKVT
HAEAVKVLKGSKKLSLSVRSVGRIPGGYVTNHVYTWVDPQGRSVSPPPDLPEHRSATLKR
TDSQRRSNMQLLQEGDEKKVNLVLDDGRSLGLMIRGGAEYALGIYITGVDRGSAAECGGL
KVGDQILEVNGHNFLSIPHDEAVRVLKSSRHLMMTVKDVGRLPHARTVVGETKWIASSQI
TESSTNSSMASFSVEQGASAAGKPGFYKGVAGSQVTLSSLVNQSRAMLEEQARHLLTEAE
RQTMSYYVEEYRDGHVGIEQLVMALFELLNTHAKFCLLSEVRGLVTPQDLEQFDGMVLRR
EIQALKARQGPAGTTVVQPDSLSMVSYPDNSSSASFMTNTTLSSARNDSVAESNEEDPPE
SVNTLLTDVSLDDVQSATAEPPPSFKPPPPPGAPRRPSRRDVLIKCPSSESSHSGLFFTA
PSSHNPPASPSLRHERDPSLDYASVKKKEPKKDKITPAQLASVSQHSIGPFPRVQSPSTG
VKPATPSPPPPPPLPAPPPPPSLPPKPVSVSKASPASSPGSKQQFVTVEVHRPNAEPDVN
EVRPLPQARGGALSQLSDSGQTLSEDSGVDIAESGRLSKDSSPNSARLPRDPQGAGGDTP
SKPPGLLEPTSTLVRVPKSASTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLRVGQV
ILEVNGVSLRGHEHRDAARLIAEAFKTKDRDHVDFLVTEFNVAL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccgacctggagcgcatgtcgctcagctcctccgccaactcggtggcgtcc
agcgcgcggacgctgtcggccaacgtgaggaagctccaccacgcgctcaacctcctgctc
agcgacccggagcgcgagcagttcatccactgcctgaacgtgtaccacgccaagcgcaac
gtgtacgacctggtccagaccctcaacgtgatcctgaacgcgcccagcaagcggcagctg
ctgcccatgctgcggctcgtcatcccccgctccgaccagctgctcttcgagcagtacacc
tccgagggcctctacctgaagtcgggtttagttgcgaacaacggcaacgccgagcagccg
ccgcccgcggccggcagcccgacgcccgccgggcacctccacccgagcatcccgccggac
ttccaggtggcgctgcgcggctctccggacagcttcagcaccagcagcgacgggacagct
ccgctggtgccgctgctcggcagcaacttcatccacgagccgcccggcgagctgcgccag
gtcaccatgaagcgccacaagagccacgagggcctgggcttcagcatccgcggcggctcg
gagcacggggtcgggatctacgtgtccctggtggagccgggcagcctggccgagcggcag
gggctccgggtcggggaccagatcgtgaaagtcaacgacaaagtcttcgataaggtcacc
cacgcggaggcggtgaaggtgctgaagggcagcaagaagctctcgctctcggtgcgctcg
gtcgggaggatccccggcggctacgtcaccaaccacgtttatacgtgggtggatcctcag
ggccggagcgtgtcgcctcctccggacctgcccgagcatcggagcgccaccctgaaaaga
accgacagccagagacggagcaacatgcagctcctgcaggagggggacgaaaagaaggtg
aacctggttctggatgacggccgctctctgggtctgatgatccgaggcggagctgaatat
gcgttggggatttacatcaccggagtggacagaggctccgcagcagagtgcggcggactc
aaggtcggcgaccagatcttggaggtgaacggccacaacttcctgagcatcccccacgac
gaggccgtccgggtcctgaagtcctcgcgacacctcatgatgacggtgaaggacgtgggc
cgcctgccgcacgccaggaccgtggtgggggagaccaagtggatcgccagctcgcagatc
acagaaagctccaccaacagcagcatggcgagcttctctgtggaacaaggagcctctgcc
gcaggaaagccggggttttataagggcgtggcgggttctcaggtgaccctgtccagcctg
gtcaaccagtcccgggccatgctggaggagcaggcgcgccacctgctgacggaggcggag
cgtcagaccatgagctactacgtggaggagtacagagacgggcacgtcggcatcgagcag
ctggtcatggcgctgtttgagctcctgaacacgcacgcgaagttctgtctgctgtcggag
gtccgaggcctggtcacccctcaggacctggagcagtttgacgggatggtgctccgtcga
gagattcaggctctgaaagcgcgacaggggccagccgggaccacggtcgtgcagccggac
tccctgtccatggtgtcgtatccggacaactcgtcttcagccagcttcatgaccaacacc
accctcagctctgcacggaacgacagcgtggcggagagtaacgaggaggatcctccggag
agtgtgaacacgctgctgactgacgtgtctctggatgatgttcagtccgccacagcagag
cctcccccctccttcaagcccccgccccctccaggggcgccgaggcgcccgagcaggcga
gacgtgctcatcaagtgcccctcgtctgaatcctcccactcgggcctgttcttcaccgcc
ccgagctctcacaacccccccgcctcgccctccctgcgccacgaacgagacccgtctctg
gactacgcctccgtcaaaaagaaggagcccaaaaaagacaaaatcacccccgctcagctg
gcctccgtctcccagcacagcatcgggcccttccccagggtgcagtcccccagcacaggg
gtcaaacctgccaccccatcaccaccgccgccaccacccctcccagctccgccccctcct
ccctctctgccccctaaacccgtgtccgtatctaaagcctccccggcctcgtctcctgga
tccaaacagcagtttgtgaccgtggaggtccaccggcccaacgctgaacctgatgtcaac
gaggtgcggccgctgccccaagctcgaggtggcgccctgtctcagctgtccgacagcgga
cagaccctcagtgaggacagcggcgtggacatagctgagtcaggacgcctcagcaaagac
agtagccccaattccgcacgtctcccccgagacccccagggggcaggaggggacaccccc
tccaaaccgccggggcttttggagcccacctccacactggtgagggtgccaaagagtgcc
agcacccttggcattgccatcgagggcggagccaacactcgccagccgctgccacgaatc
gtcacaatacagagggggggttcggctcataactgcggccagctgagggtgggccaggtc
atcctggaggtgaacggggtttccctgaggggccacgagcacagggacgccgcgcgcctc
atcgccgaggccttcaagaccaaagacagggaccacgtggacttcctggtcaccgagttc
aacgtggctctatag
DBGET
integrated database retrieval system
