Nematolebias whitei (Rio pearlfish): 119424789
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Entry
119424789 CDS
T08042
Symbol
ric1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119424789 (ric1)
Membrane trafficking [BR:
nwh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
119424789 (ric1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
119424789
NCBI-ProteinID:
XP_037548222
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All DBs
Position
18:complement(27384922..27420267)
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AA seq
1437 aa
AA seq
DB search
MYFLTGWPRRLLCPLRSAEEPFHIQPSSQRFYFALLSETQLSIWFSRPSVLIVSYIESAK
AAAQFGFYQKAEWKPDDSIVAVATAKGYILLFDVLGGRDEKYLYEPVYPKGSPRVKVTPG
YKEEQCAPALSLEMKKPVDLEAPITSLQSLQEDLLVCTADGYLHILHWDGLGSNGRMAIC
LTTIPFSLDLQSARGGPSLDMEGVYIRCMEYCVTLDGFAVVLSDGRLGFITPLSNTITAD
QLQGVWAADVSDGTCVAVNNKYRLMAFGCASGSVLVYVIDTTTGSMQLSHRLELTPKHYP
DIYNKTGPVKLICWSPDYSVVMVTWECGGLSLWSVFGAHLICTLGEDFAYQSDGTKKDPL
KISSMSWGAEGYHLWVLPYRQERRRQEEQQDVEMTSPPHPSLQAGILQFHFIKSALTVNP
CTSNQEQVLLHGEDRLYLTCGDPTQIHSTCDTHLHAHLHSRDGSPLHHNPDSPLSQGLST
LLGHKHWQVVQIHSTYLESNWPIRFAAIHSAGQCMAVAGRRGFAHYSLFTRKWKLFGNIT
QEQNMTVTGGLAWWSDFVVVACYNFTDQQEQLRLYQRSSNLDNAFASVTKLHSDTLLLNV
FRDMVILFRADCSICLYSIEKRSDGPNPSASVELLQEVSMSRYIPHPALVVSVTLTSVRT
ETGITLKAPQQACTAESIMLNLAGQLIMLQRDRSGPQVREKETPATNKKLLPFCPPVVLA
QCVENVWTTCRSNKKKRHLLEALWLSCGEAGMKVWLPLFPRDHRKPHSFLSRRIMLPFHI
NIYPLAVLFEDALVLGATNETVLYDGLQGSSEPLEALFPYCTVERTSQIYLHHILRQLLV
RNLGEQALMLAQSCASLPYFPHVLELMVHVVLEEEATSREPIPDPLLPTVAKFITEFPLF
LQTIVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQ
HATLLFNTALEQGKWDLCRHMIRFLKAIGSGEMESPPSTPSTQEPSSTGGFEFFRNRSIS
LSQSADSIATGKFNLQKTFSMPTGASAKGRDVECAENMYIDMMLWRHARHLLEQVRLRDL
GCFSAQLGFELIGWLCRERNRVARVDDFVSALKKLHKDFFWPFPVIPVGSLNSPLKNGGC
RTVLSTQLLKSQSADSLLNSDMDTAPSTAPTNHTWMGGLGQRAKDMDTASSVHSSQHSPQ
TQDAFLSLLTNKVEEYSIGSATDLTETSSVVDGDWTMVDENSTLSLSQAELEHISMELAN
KGPHKSQVQLRYLLHVFMEAGCLEWCVVIGLILRDANVIKQMISFLDNPEVPSETVQSVR
HGLLAVDAWASADCLGYKPFLNLIQPQLQQLMESTAEQVQPEAFQPASQTSKLSASEGLG
GAAVPRVEDSRGVAAPLGLALPSVEPAGVFPRPPSEDSPEQTEEQAEEEGTYDCTLS
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctaaccggctggccccggaggctgctgtgtccgctgaggagcgcagaggag
cccttccacatccagcccagctcccagaggttttacttcgccctgttgtcagagacacaa
ctcagcatctggttcagtcggcccagtgttttgatagtcagctacatcgagtctgcgaag
gcggcggcccagtttggcttctaccagaaagcagaatggaaaccagacgactccatagta
gctgtggcaactgccaaaggctacatcctcctgtttgatgtactgggtggaagggatgaa
aagtacctctatgagcctgtctatccaaaaggcagtcctcgcgtgaaggtgaccccgggt
tataaggaggagcagtgtgcccccgctctctctttggagatgaagaagcccgtagatctg
gaggcgccgatcaccagtctgcagtctctccaggaggatctactggtttgtaccgcagac
ggatatctccacatactgcactgggacgggctaggcagcaatggtcgcatggccatctgc
ctcactacaatccccttttcattagacctgcagtctgctcgagggggtccctctctggac
atggagggtgtttatattcgctgtatggagtactgcgtgactctggatggatttgctgta
gttctcagtgatggacgcttgggttttatcacaccgctgagtaataccatcacagcagat
cagctgcagggagtctgggctgcagacgtgtctgacggcacctgtgtggctgtcaacaac
aagtacagactgatggcgtttggctgtgccagtggatcagtgctggtgtacgtgatagac
accacaacagggtccatgcagctctcccacagactggagctcacgccaaaacactaccca
gacatttacaacaagaccggtcctgtgaagctaatctgctggtcacctgactacagtgtc
gtcatggttacctgggagtgtggcggcctctcactctggagtgtctttggcgctcatctc
atctgcaccctgggagaagactttgcgtatcagtccgatggtacgaagaaagatccactt
aaaatcagctccatgagctggggagcagagggctatcatctatgggtgctcccttacaga
caggagaggaggcgacaggaggagcagcaggacgtggagatgacctctcctccccacccc
tccctgcaggccggcatactgcagttccactttattaagagcgccctcacagtcaatcct
tgcacgagcaaccaggagcaggtgttactccacggtgaggaccgcctctacctgacctgc
ggcgatcccacacagatccacagcacctgtgacacacacctgcacgcacacttacactca
cgcgacggcagcccgttgcatcacaaccccgactcccccctctctcagggactcagcact
ttactgggacacaagcactggcaagtggtccagattcacagcacataccttgagagcaac
tggcccatacggtttgcagccatacactcggcaggccagtgcatggctgtggcaggcagg
aggggctttgcacactactccttattcacaaggaaatggaagctgtttggaaacatcact
caggaacagaacatgacggtgacaggaggtctcgcctggtggagtgactttgtagtggtg
gcatgctacaattttacggaccagcaggagcagttgaggctgtatcaacgctcatccaac
ctggataacgcctttgcctcggtcaccaagctgcactctgacactctgctgctcaacgtc
ttcagagacatggtcatcctgttcagagccgactgctccatctgcctctatagtatagag
aagaggagtgatggtccaaacccatcagctagtgtagagttgctgcaggaggtgtcaatg
tcccgctacatccctcacccagctctcgtggtctccgtcacactcacatctgtgcgcaca
gagaccggcatcactttgaaagctccgcagcaggcctgtacggcagagagcatcatgctg
aatctggctggccagttgatcatgctgcagagggaccgatcaggaccacaggtacgagaa
aaggagacgcctgccaccaacaagaagctgctaccgttctgtcctccagttgtgctggcc
cagtgtgtggagaacgtttggaccacctgtcgctcaaacaagaagaagcgccatctgctg
gaagccctctggttgtcctgtggagaggcaggaatgaaagtatggcttcctctgttcccc
cgagaccatcgaaagcctcactccttcctgtccagacgcataatgctgcccttccacatc
aacatctaccctttggctgtgctgtttgaggacgccctggtactgggagcaaccaatgag
acggtgctctacgacgggctgcagggatcctccgagcctctggaggcactgttcccctac
tgtactgtagagaggacctctcagatctacctccaccacatcctgaggcagctgctggtt
cgcaacctgggcgaacaggctttaatgctggctcagtcatgtgcctccctgccctacttc
ccccatgtcttggagttgatggtacatgtggtactggaagaagaagcaacctcacgggaa
ccaataccggaccccctgcttcccacagtggccaagttcatcacagagttcccgctcttt
ctccagactatcgttcactgtgccagaaaaacggagtacgctctgtggaactacctgttt
gcagctgtgggaaaccccaaagatttgttcgaggagtgtctcatggctcaagatctggac
acggcagcctcctatttgatcatactgcagaacatggaggttccagcggtgagccggcag
cacgccactcttctcttcaacacggcgctcgagcagggcaagtgggacctttgtcggcac
atgatcagattcctcaaagccatcggctcaggggagatggagtcaccgccctccacaccg
tccactcaggaacccagctcaaccggaggcttcgagttctttagaaaccgcagcatcagc
ttgtctcagtcagcagactccatcgcgacaggaaagttcaacctgcagaagaccttcagc
atgcccactggagcgtctgccaaaggtcgggatgtggagtgtgcagaaaacatgtacatc
gacatgatgctctggcgccacgcccgccacctcctggagcaggtgcgccttcgtgacctg
gggtgcttctccgctcagctgggcttcgagctcatcggttggctgtgccgcgaacgaaac
cgcgtggctcgagtagacgattttgtttcagcgctgaagaaactccacaaggatttcttc
tggccttttcccgttatacctgtgggaagcctcaactcaccactgaagaacggaggctgc
cgcacagttttgagcacgcagctgctgaagtctcagtctgcagacagtctgctgaacagc
gacatggacacagccccttcgacagcccccaccaaccacacctggatgggtgggctcgga
cagagggccaaagacatggacacggcctcatctgttcactccagccagcactcaccacag
acacaagacgccttcctgtcactgctcactaacaaggttgaggaatacagcatcggctcg
gccacagacctgacagaaaccagctcggtggtggacggcgattggaccatggtggacgag
aactccaccctgagcctgagtcaggctgagctggagcacatctccatggagctggccaac
aaaggcccgcacaagtctcaggtgcagctcaggtacctccttcacgtgttcatggaggcg
ggctgtttggagtggtgcgtcgtgattggtttgatcctgcgggacgcaaacgtcatcaaa
cagatgatcagcttcctggacaaccccgaggttccctcagaaactgtgcagagcgtccga
cacggcttgctggctgttgacgcctgggcctccgcagactgcctgggctacaaaccattt
ctgaacctgatccagccgcagctgcagcagctgatggagtcgaccgccgagcaggtgcag
cccgaagcgttccaacctgccagccagacctcaaagctcagcgcctccgaaggactggga
ggggccgccgtccctcgtgtcgaggacagcagaggcgtggccgctcctctgggtctggcc
ttgccctcggtcgaacctgcgggagttttcccccgtcccccctctgaagactctcctgaa
caaaccgaggagcaagcagaggaggagggaacctacgactgcaccttgtcctga
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