Nematolebias whitei (Rio pearlfish): 119424842
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Entry
119424842 CDS
T08042
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
nwh01100
Metabolic pathways
Module
nwh_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
119424842 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nwh01003
]
119424842 (csgalnact1a)
Enzymes [BR:
nwh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
119424842 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
119424842 (csgalnact1a)
Glycosyltransferases [BR:
nwh01003
]
Glycan extension
O-Glycan
119424842 (csgalnact1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Csm1_N
Motif
Other DBs
NCBI-GeneID:
119424842
NCBI-ProteinID:
XP_037548275
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Position
18:22431103..22456015
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AA seq
596 aa
AA seq
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MIFLQLLMLPAVMLRRGLLTWVSRIGGVLVLLCCSLSLLYLMTCSPPHSNSPPLSHVLPH
AESDRPNLGGTGPVIGAGPGGTGGAGAQSRGPPAVHTYQMLLQEREEQHRLYISSLKKQI
AQLKEDLQERSQQLKRVQESLKTVVMGPEDVQEGGAGSQGGGVRDVQGVKSQQFDLQEFL
RGQLSKAEVTAGTRLPSEYAVVPFESFTLQKVYQLEMGLTRHPEEKPVRKDKRDELGEVL
EVALHSLNTVASPQGKNAADKTQTSKVYTPSDFIEGITRTEKDKGTLYELTFRGESTHEF
RRLVLFRPFGPLMKVKSERMDTADVLINIIVPLSGRTDKFKQFMHNFKEVCLRQDGRVHL
TVVYFGKEQISEVRSTLENTSREAGFKNYTLLQLDEEFSRGRGLDVGARAWKTSNVLLFF
CDVDIYFTADFLNTCRLNTQPGKKVFYPVLFSQYNPTLIYGSPEHIPPVEQQLVIKKDTG
FWRDFGFGMTCQYRSDFINIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLW
HEKHCADELPPDQYRMCMQSKAMNEASHGQLGMLFFRHEIEAHLRRQKEKQNLKKT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgatatttctgcagttgttgatgctacctgcagtaatgttgaggcgtggactactaacg
tgggtgtcccgcatcgggggggtgctggtgctgctctgctgctctctgtcactcctctat
ctgatgacctgcagtcctccacactccaacagccctccgttgagtcatgtgttacctcac
gcagagtccgaccgccctaacctcggaggtacgggcccggttattggagccgggcccgga
gggacaggaggagcaggggcccagagccggggcccaccagccgtccacacttaccaaatg
cttctccaggagcgcgaagagcagcaccgcctctacatctcctccttgaagaagcagatc
gctcagctgaaggaggacctgcaggagcgcagccagcagctgaaaagagtgcaggagagt
ctgaaaacagtagtgatggggccggaagatgtgcaagaagggggtgctgggtcacaagga
ggtggggttagagacgtccagggagtaaagagccagcagtttgacctccaggagtttctg
agaggtcaactatcaaaggctgaggtgacagctggcaccaggttacccagcgagtacgcc
gtggtgccttttgagagcttcaccctgcaaaaggtgtaccagctggaaatggggctcact
cgtcatcccgaggagaaacctgtcaggaaggacaaaagagatgagctgggagaggttctg
gaggtggctctgcacagcctcaacacagtcgcatctccgcagggcaagaacgcagcagac
aaaactcaaaccagcaaagtctacactccgtctgacttcatagaaggtatcactcgtaca
gagaaggacaaaggaacgctgtacgagctgaccttcagaggggagtccactcatgagttc
aggcgcctggtcctcttccggccctttggacccctgatgaaggtgaaaagcgagaggatg
gacacggccgacgtcctgattaacatcatcgtcccactttctggacgaacggataaattc
aaacagttcatgcacaacttcaaggaagtctgcctacgtcaggatggccgggtgcatctg
acagtggtgtattttgggaaggagcagataagcgaagtccgcagcactctggaaaacaca
tccagggaagcgggttttaagaactacactctgctgcagctggacgaggagttttctcgg
ggacggggtctggacgtaggggcccgggcctggaagacgagcaacgtgttgcttttcttc
tgcgacgtggacatctacttcaccgctgacttcctgaacacctgcaggctgaacacacag
cctggtaagaaggtcttctaccccgtcttgttcagccagtacaaccccacgctgatctat
ggaagtcctgagcacatcccgcctgtggagcagcaactggtgatcaagaaagacacgggc
ttctggagggattttggtttcggcatgacttgccagtacagatccgacttcatcaacatc
ggaggttttgacatcgacatcaaaggctggggaggtgaagacgtccatctctacaggaag
tacctccacagcaacctgctggtggtccgagccccgtcgcgcggcttgttccacctgtgg
cacgagaagcactgcgccgacgagctgcccccggaccagtaccgcatgtgcatgcagtcc
aaggccatgaatgaggcctcgcacggccagctggggatgctcttcttcaggcacgagatc
gaggctcacctccgcaggcagaaagaaaagcagaacctcaagaaaacatga
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