Nematolebias whitei (Rio pearlfish): 119424852
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Entry
119424852 CDS
T08042
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119424852
Spliceosome [BR:
nwh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119424852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
dsrm
DZF_N
Dicer_dsRBD
SGP
Motif
Other DBs
NCBI-GeneID:
119424852
NCBI-ProteinID:
XP_037548286
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All DBs
Position
18:complement(30980150..31082083)
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AA seq
727 aa
AA seq
DB search
MRSFRSFSNDDRHVMAKHSTIYPSSQELEAVQTLVSTVECALKHVSDWLDQSSGNAHNNV
DSEAADRPEEDDPGDEPSEEAEESGCNRDSSIGGVLCGVIRVGLVAKGLLIKGDMELELV
LMCRDKPTQTLLDTVCCNLPTQIQKQTEEKYEVTSSLPEAAILVQTTAEPKLTLKITLTS
PAMREDEDLEEEYEEELETQENGEEREEVEEEVREEEEEQGKENGQVLGAAAQRVEAEEE
GEVLDRHRCLLALAALRHAKWFQARVNGLKSCVIVLRILRDMCNRHPVWEPLKGWPLELI
CEKAIATCNRPLGAGEALRRVMECFASGILLPGGPGLHDPCEKEPTDTLTDMTDQQAEAI
TYAAQHALRLMAFGQIYKVLEMEPLPSNKPSQKYPWSDKEGLGLKRPYEDGMMDDKDLIK
KMKRNLRKVLDNKAIDSNQPMNALMRLNQIRPGLQYRLLSQSGPVHAPVFTMSVDLDGTV
YEASGSSKKTAKLHVAVKVLQAMGYPTGFDSDLDPMSSDEKSDSEGKSETSSHSSNNPTH
SSDGSNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISESGGSHDKRFVMEVEVDGQ
KFRGAGPNKKVAKASAALAALEKLFSGPNAAANKKKKILPQTKGALAAAAAASAVAAQVA
RGRGRAALARGAFVSAAAPGYITPGFGTPYGYSPAAAAAPAYGLPKRMLLLPVMKVPAYP
VPHYHFF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctttcgttcctttagcaacgatgaccgccacgtcatggcgaagcactccacc
atctacccctcctcgcaggagctggaggccgtacaaacgctggtatccacggtcgagtgc
gccctcaaacacgtctctgattggctggatcagagcagcggaaacgctcacaacaacgtc
gacagtgaagcagcagacagaccagaggaggatgaccctggtgatgagcccagcgaagaa
gctgaagaatctggctgcaacagggattccagcattggtggcgtgctttgtggagtgatc
agggtcggactagtagccaaaggactcctgatcaaaggcgacatggagctggagctggtg
ctgatgtgcagagacaaacccacacagacactgctggacactgtctgttgcaatttaccc
acacagatccagaagcagacagaagagaaatacgaggtcacaagctccttgccagaggca
gccatcctggtccaaaccacagcagagcccaagctcacactgaagattaccctcacctca
ccagcaatgagggaagatgaagatctagaagaggagtatgaggaggagttagagacacaa
gagaatggggaggaaagagaagaggtggaggaggaagtgagggaagaagaggaggagcag
ggaaaagaaaatggtcaagtgttgggtgctgctgcgcagagagtggaggctgaggaggag
ggggaggtgctggatagacacagatgtctgttggccctggcagcgctgcgacacgccaaa
tggtttcaggctcgggtgaacggacttaagtcctgtgttatcgttctcaggatacttaga
gacatgtgcaacagacaccctgtttgggaacctctcaagggatggccattagaactcata
tgtgagaaggccattgctacctgtaacagacctctcggggcaggagaagctctgcgtcga
gtcatggaatgtttcgcttcaggcattctcctcccaggtggtccgggtttacatgacccc
tgtgagaaagagcccacagataccctcaccgacatgaccgaccagcaggctgaggctatc
acctatgcagcacagcatgctctcagactcatggcatttgggcagatctacaaggtgtta
gagatggagcctcttccctcaaataaaccatcacagaaatacccatggtctgataaagaa
ggtttaggcctgaagaggccatacgaggatgggatgatggatgacaaagacctcataaaa
aagatgaagagaaatctcagaaaagtcctcgacaataaagccatagactccaatcagcca
atgaatgccctgatgcgtctgaaccagatccgaccaggcctgcagtatcgcctgctctcc
cagtctgggccagtacacgctccagtcttcaccatgtctgtggacctggacggcaccgtt
tatgaagcatctggatcctcaaagaagacagccaagctccatgttgctgtcaaggttctc
caggcgatgggttacccaacaggtttcgactcagatctggaccccatgagctcagatgag
aagtcggacagcgaggggaagagtgagacgtcttcacactccagcaataacccaactcat
tcgtcagatggttcaaacacactggaggtgcgaactcagggccccatactgacggcgagt
gggaagaatcccgtcatggagttgaatgagaagagacggggcctcaaatacgagctcatc
tccgagagcggaggcagccacgacaaacgctttgtcatggaggtggaggtcgatgggcag
aagtttcgtggggcaggccccaacaaaaaggtagcaaaggccagcgctgctctagctgct
ctggaaaaactcttctctggtcccaacgcagctgcaaacaagaagaaaaagatcttgcct
cagactaaaggagctctggctgcagcggcggcagcctcagcagtcgcagcacaggtcgca
agaggaagaggaagagcagcactcgcaagaggagccttcgtcagtgctgctgcacctgga
tacatcacgccaggtttcggtacaccgtacggctacagcccagctgcagcagccgctcct
gcatacggtttgcccaagagaatgcttctgttgcctgtcatgaaagtgcccgcctacccc
gtcccccactaccacttcttttag
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