Nematolebias whitei (Rio pearlfish): 119424898
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Entry
119424898 CDS
T08042
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A
KO
K20353
COPII coat assembly protein SEC16
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119424898 (sec16a)
Membrane trafficking [BR:
nwh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
119424898 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
119424898
NCBI-ProteinID:
XP_037548337
LinkDB
All DBs
Position
18:complement(23090504..23108839)
Genome browser
AA seq
2352 aa
AA seq
DB search
MQPPPWAGPPGSSGPPPSGPNMFRRTRPQKQGIAATATMPPPTQPMTDPFAFGRAQPPIA
AGGLPTIPNSNPPQMQTPPSTIYSQLGPGLPPQPSMLENIPAAPTCHPPSSMPGVTLFNP
RSSASPGVFPAPSFTGSASSNSEQDYFNSKYQTPTTSTELPHIAPTPSETPFNQEFQGQP
ALHPAPFQPPAPTSSSAQWVPDHGSRPPSVQNYFQPTSDLPLHSLNVTPQTQTYPSHSQS
PPTPPVQPRHPHNQACLPPQNPATSNISPWHDPNGPQQQKSQFQSYFNQSSELQDIWFNQ
SPQDSGYHQMAIGPSHSQPVADSAGYQHVSNTGHGPNTGHGPTTRPGPTSDSASDLCAQE
SGTLSMFFKDSDVENEETLSDEKNKALNGVVGFFQPHSNPQTDSGHADASLNYQGVSVQD
NSHLPYMNESNSQGNPQKPPDARLDHVENLECIPNQEVLPSEIYNSTAVTAPHGVDQFET
GPNLETPDSVPRPMRSASVSSNYSNLSHGSGTGTRRQKGVEGTFIQQESPRLADNANPSA
ATGGYFEQIDTSPAGDAGRQQSSLEQTWHPTPSPPKPTGIFQASANSSFEPVRSHGVGVR
PSEVDRAKMVAEGGTDTSGNLEQPPDNMENIYSPGRPPPGATAGGGIPHLTHPVVHSRPS
SRAFGANRPCESPATTLWAQNDPTNLGANILLAPAAPTVLAPLREPSADVIQPPEDGPLD
LQPLQRIQPTCHQHSENLENPPKVSDSEPNDSQGNLGCTSLLVSGSFHQPVLIAPPVSNY
NMIPISALAQSSTLSSHVETTLPERSLAQGQGASCTQPPFLPSKENPLFSSGSMTFCSSA
SNQGPLNLTRDKMIEAISEIAASPQSQPVHPPLSRSQSLSGDNHSTFHVNSPSSSLVAAS
VSNYNQASNFELLDFSMHQSHVHIQASDQPPSLHEMPPSSNGFYLQVTKDAQQGAKGGGN
ASAQITASLPTPQVPLASANMQQTLNESSQTSDSQTAQIGQKEAHSVPVSGAQPPPSQSS
TLAQGPTAGSAPISAYPPGPQGPVPSRTSHPASAEPPRPPSTAGSHQGGYGPPPPEAGQM
YGGYYGNYGEYSDNRAYPPGQYPPPSRDPRAQPYYQDGSYRGRADPWYGRYEGQNPGYRD
PNYQYREPQTDRPSSRTSQYSDRPSSRQGYPDDYQRANQSAYSDYYAEYPKHYDYGGYNY
GNYDPRYRGYYDHSYWSYYNEAYRNNYYNQQMYPARKEGYDDQWRYYPGYDASFDDENQR
SRDPYGDDFDRRSVHSERSAHSVHSSHSQHSRRSSFSSRSQQSQVYRSQPDLVSAAYDTT
SSTLAVDYSYGQYPNQTDASQNYSQYPYTSEYTSDSNWVAPEQPPPRPATPEKFTIPHRC
ARFGPGGHLIQVLPNLPSAGQPALVDIHNMETMLQDTTDQAELRVFPGPLIKQETHKVDV
IKFSQNKALECSRDNNLLDRDSARLLWDFIVLLCRQNGTVVGTDIADLLLKEHRSVWLPG
KSPNEANLIDFNNEPLARAEEEPGAGPLSLLSDTFMIVPENVGKETERFRELLLFGRKKD
ALEAAMKGGLWGHALLLASKMDNRTHARVMTRFANSLPMNDPLQTMYQLMSGRMPASATC
CGEEKWGDWRPHLAMVLSNLTHNLNLDTRTITTMGDTLASKGLTDAAHFCYLMAQVGLGV
FTKKSTKMVLIGSNHSLPFIQFATNEAIQRTEAYEYAQSLGSQPCSLPNFQVFKLIYACR
LAEAGLCAQAFHYCEVISKSVLVHPSYYSPVFISQVIQMSEKLRFFDPQLKEKPEQELFI
EPEWLIRLRQLDGQIRTGLITYNVDRSTPAQFDGSSECSDLDQQTPSEPYSMLGEVDGHA
PNNPLMSSLLPGPPPQGVQLMPPAPTSILQDKMAPPQPLLCNDAPQVYPVPLSGPPGQVP
MPGFHPQDPGLAPPPFQPQSEQLEVYPGAHQQHFPSSQEGQMSPHTFPSQVPHSPIQMIP
LPLQMPQHMPPSPSHMPPMEQPSLAPPEMHSAHQISTSPPRSSFTPQMDLYDHMANMAPG
RTRTISQSSMHMASGRSSRRASESSTHSGGRERSNSAVKQVSPPPPSIPEQPRKEEAKKA
KKDLPEKKSWLFWPFGKRKNEAHLPDDKNPSIVWDEKKNRWVDLNEPEEESKPPPPPPTG
FPKMPGPGGPTAPPSSGAPVNIFSRKAGTRSRYVDVLNPSRTVKPSGGAPPVDIFAPLAP
MAMPANLFVPNSAPDDLQPLEGSEGGTQEQNSPNSTAAPQMFNPTLLPPASEGPPCPDGS
QSGELSRSSSMSSLSREVSQHFNQNHPVQGPPPAGGVTFYNPAQFAQQTSAPSGGGLRSG
RLGGQRQYPVLK
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccccctccttgggctggacctccaggatccagtgggccacctccttctggaccc
aatatgttccgcaggaccaggcctcagaagcaaggaatagcagcgactgccacaatgcct
ccacctacccaacccatgactgatccttttgcttttggcagagctcagccccctatagct
gcaggtggacttccaacaataccaaacagtaaccctccccaaatgcaaaccccgcctagc
accatctactctcagcttggtcctggcctgcctccacaaccgtcaatgctagaaaatatt
ccagctgcaccaacttgtcacccaccatcctctatgccaggggtgactttatttaaccct
cgtagttcagcatctcctggtgttttcccagcaccgagtttcacaggatctgcatcttct
aatagtgaacaagattattttaattcaaaatatcagacaccaaccacttccacagaattg
ccacatatcgcgccaacacctagtgagacaccttttaatcaggaatttcaaggacagcct
gctcttcatcctgcaccctttcagccgcccgcccctacttcctcgtctgcccagtgggtc
cctgatcatggaagtcgccctccatcagttcaaaactatttccagccaactagtgatctt
ccattgcattctttaaatgtcactccacagactcagacgtatccttcccacagccagtca
ccccctacacctccagttcaaccaagacatccacacaatcaagcctgccttccccctcaa
aaccctgcaacatctaatatttccccgtggcatgatccaaatggaccccagcaacaaaaa
tcacaatttcagagttactttaatcaaagctctgagctccaggacatttggtttaaccaa
tctccacaggactcaggctatcaccaaatggcaattggtccgagccattctcaacctgtt
gcagactctgcaggatatcagcacgtgtctaacactgggcatggacctaacactggacat
ggaccaactaccagaccagggcctacttctgattctgcctcagatctatgcgctcaggaa
tctggtacactctcaatgtttttcaaagacagtgatgtggaaaatgaggaaacactctct
gatgaaaaaaataaggcattaaatggggttgttggttttttccagcctcatagcaatcca
caaacggacagtggtcatgcagatgcttccttgaattaccaaggagtctctgttcaagat
aattcacaccttccctatatgaatgaaagcaattcccagggaaatcctcagaagcctcct
gatgctcggttagaccatgtagaaaatttggagtgcatcccaaatcaggaagtattacct
agtgagatctacaacagtactgctgtcactgccccacatggagtggaccagtttgaaact
gggccaaacctggaaactccagattcagttccacgaccaatgagatctgctagtgtgtca
tccaattatagcaatctgagccatggaagtggtactggcacccgtcgacaaaaaggagtt
gaaggcacctttattcagcaggaaagcccacgtcttgctgataatgctaacccatctgct
gctactggaggctactttgagcagattgatacttctccagctggagatgcgggcaggcaa
cagagttccctagaacagacgtggcatccaacacctagccctccaaaaccaacgggcatt
tttcaagcaagtgctaatagctcctttgaacctgtgcgctcacatggagtaggggtacgt
ccatctgaggtggatagggctaaaatggtggctgaaggaggcactgacacatctggcaac
ttggagcagccaccagataatatggaaaatatttatagtccaggacgccccccacctgga
gctactgctggaggtggaatacctcatctgacacacccagtggttcattctcggccttca
tctcgcgcttttggggccaatcgtccctgtgaaagtcctgctactactttgtgggctcag
aatgatcccacaaatttgggtgctaacatccttcttgctcccgctgccccaacagttcta
gctcctttacgagaacccagtgctgatgtcatccagccacccgaagatggtccactggac
ctgcagcctttacagagaatccagccaacttgtcaccaacactcggagaacttagaaaac
ccaccaaaggtgagtgattcagagccaaatgactctcaaggcaacctgggctgtacttct
ctcctcgtatctggctcatttcatcagcctgttttaattgccccacctgtctccaattac
aatatgattcccatcagtgctctggctcaatcatccaccctgagtagtcatgtggaaact
accctacctgagagatcacttgctcaggggcagggtgctagttgtacgcaaccaccgttt
ttaccttctaaagaaaatccactcttttcttccggatccatgactttctgttcatcagct
tctaaccagggtccacttaatttgactcgagacaaaatgattgaggcaatatcagaaata
gctgcttcaccgcagtcccaacctgttcatccccctctttcaagaagccaatcattgagt
ggagacaaccattctacttttcatgttaattcaccgtcttcttctcttgtggctgcttct
gtctctaattataatcaagcatccaattttgaactacttgatttttctatgcaccaatca
catgtccatatccaagcgtctgaccaacctccttctctacatgaaatgcctccatctagt
aatggattttacctgcaggtcaccaaagatgctcagcagggggcaaaagggggaggaaat
gcctctgcccaaatcacagcttcattacctaccccacaggtaccattagcaagtgctaac
atgcagcaaactctaaatgaatcttctcagacatccgattctcagactgcacagatagga
caaaaagaggctcattctgttcctgtgagtggagcacaacctccccctagtcaaagttca
actttagcacaaggacctactgcagggagtgctcctatatctgcttaccctcctgggcca
caagggccagtaccttcacggacttcccatccagcttcagcagagccacctcgaccacct
tcaacagcaggtagccatcaaggtggctatggacctcctcctcctgaggcaggacagatg
tatggtggttattatggtaactatggcgaatattcggataacagagcgtatcctccaggc
caatacccacctccatctagagatcccagagcacagccatactatcaagatggttcatac
cggggcagagcagatccctggtatggcagatatgaagggcagaatccaggttaccgtgat
ccaaactatcaatacagagaaccacaaacagatcggcccagctcaaggactagtcagtac
tctgacagaccctcatcaaggcaaggctatcctgatgattaccaacgagcaaaccaaagt
gcctacagtgattattatgcagaatatcccaaacactatgattatggaggatacaattat
ggaaattacgacccacgatacagaggatactacgatcattcgtattggtcatattacaac
gaagcgtacagaaacaactactataatcagcaaatgtatcctgccaggaaagaaggatat
gatgatcagtggcggtactatcctggttatgatgccagttttgatgatgaaaaccaacgt
agtagagacccgtatggcgatgattttgatcgacgcagcgtacacagcgagaggtctgca
cacagtgtgcacagctcccacagtcagcacagcagacggagcagcttcagctcacgatcc
caacagagccaggtgtacaggagccaacctgacttggtatcagcagcttatgacaccaca
tcatccactctggctgtggactactcttatgggcaatatccgaatcaaaccgatgcctca
caaaactacagccagtacccatatacatcagaatacacttcagacagtaactgggttgct
cctgagcaacctccccctcgtcctgcgaccccagagaagttcaccataccccaccgctgt
gcccgatttggacctggtggtcatctgattcaagtcctgcctaatctcccctcagctgga
caacctgctcttgtcgatatccacaatatggagaccatgctgcaggacaccacagatcag
gctgaactgcgagttttccctggaccccttattaagcaggagacccataaggtggacgtc
ataaagttttctcaaaacaaagcgctggagtgttctcgtgacaacaacttgttggacaga
gactctgcccgcctgctctgggacttcattgtgctgctctgtagacagaatgggactgtt
gttggaacagacatcgctgaccttttgttgaaggagcatcgctcagtttggcttccaggc
aagagtcccaatgaagccaacttgattgattttaacaatgaacctcttgcacgggctgaa
gaggagcctggagccggaccgctgtcgcttctgtctgacacttttatgattgtccctgaa
aacgttggcaaggaaactgaacgtttcagggagctgttgctgtttggccgcaaaaaagat
gcactggaagcagccatgaagggaggtctctggggtcatgccctgttgttagccagtaag
atggacaacaggacgcatgcacgtgtcatgacaagatttgccaatagtttgcctatgaat
gatcctctccagacaatgtaccagttgatgtcaggaaggatgcctgcatcagccacttgc
tgtggagaagagaagtggggtgactggcgtcctcatctggccatggtgttgtctaacctc
actcacaatctgaacctggatactcgcacaatcaccaccatgggtgacactcttgcttct
aaggggctgacggacgctgcacatttctgctaccttatggcccaagttggactgggagtt
ttcacaaagaagagcaccaagatggttttgattggctcaaaccacagtttgccctttatt
cagttcgctaccaatgaagcaattcagaggactgaggcctatgagtatgctcagtctctg
ggctcccagccatgttcactgcccaacttccaggtgttcaaattaatctatgcatgccgg
ttggctgaggcaggcctgtgcgcccaggcctttcattactgtgaagtcatctcaaagtct
gtccttgtgcatccctcgtactactctcctgtgttcatcagccaagtcattcagatgtca
gaaaaacttcggttctttgatccacaactgaaggaaaaacctgagcaggagttgtttatt
gagcctgaatggttgattcgcctccgacagttggatggacagataaggactggacttatc
acttacaatgtggaccgatcgacacctgcacagtttgacggcagcagcgaatgttctgac
ttggaccaacagactccatctgaaccttacagcatgctgggggaagtggatggccatgct
cctaataaccctcttatgagttcattactgccagggcctccaccacaaggagtgcagtta
atgcccccagctcccacttcaattcttcaagacaaaatggctcctcctcagcctttactc
tgtaatgatgcgccacaggtttacccagtaccccttagtggaccaccaggccaggtccct
atgccaggatttcatccacaagatcctggccttgcccctccccccttccaacctcaatct
gagcagttggaggtctatccaggagcccatcagcaacattttccttcttcacaagaggga
caaatgtcaccacacacatttccttcacaggtgccacattcacctatacagatgattccc
ctaccgttacaaatgccgcagcacatgccaccttctcctagccacatgccacctatggag
cagccttccctggctcctccagagatgcacagtgctcatcaaatctcaacgtccccaccc
aggagctccttcacacctcagatggacttgtatgaccatatggctaacatggctcctggc
agaactcgaacaatttcacagtcttcaatgcatatggcatcgggacgcagctctcgcaga
gcatcagagtcgtcaactcactctggtggaagagagcgaagcaactctgctgtgaaacag
gtgtctccgccgcctccctcgattcctgaacagccacgtaaagaagaggccaagaaagcc
aagaaagacttgcctgaaaagaaaagctggttattttggccctttggaaagaggaaaaat
gaggctcacttgccagatgacaaaaatccctctattgtgtgggatgaaaagaagaacaga
tgggttgacttgaatgaacctgaagaggagagtaagccccctcctccacctcccactggt
tttcctaagatgcctggtcctggagggcccactgctccaccaagtagtggtgcacctgtc
aacattttttccaggaaggcaggtaccaggagcagatatgtggatgttctgaacccgagt
agaaccgtcaagccaagcggaggcgcccctccagtggacatttttgctcctttggcacca
atggccatgcctgctaacctgtttgtgcctaattcagctcctgatgatctacaacctctg
gagggaagtgagggaggaactcaggagcagaattcaccaaactccaccgctgctccacag
atgttcaacccaactttgttaccaccagcctcagaaggtcctccttgtcctgatggttct
cagtctggggagctgtcacgttctagctcaatgagttctttatcacgtgaagtgagtcag
cattttaaccagaatcatcctgtccagggacctccacctgccggaggcgtcactttttat
aaccctgcacagtttgcacaacagacaagtgcaccatcgggaggtggactacgttctggc
cgtttgggcggtcagcgccagtacccagtgttgaagtaa
DBGET
integrated database retrieval system
