KEGG   Nematolebias whitei (Rio pearlfish): 119424906
Entry
119424906         CDS       T08042                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082  ATP-dependent chromatin remodeling
nwh03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119424906
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119424906
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nwh01009]
    119424906
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nwh03021]
    119424906
   03036 Chromosome and associated proteins [BR:nwh03036]
    119424906
Protein phosphatases and associated proteins [BR:nwh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119424906
Transcription machinery [BR:nwh03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     119424906
    SWI/SNF complex
     119424906
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    119424906
   PBAF complex
    119424906
   SWI/SNF complex
    119424906
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 119424906
NCBI-ProteinID: XP_037548345
LinkDB
Position
18:2103033..2125978
AA seq 368 aa
MQLALSKTFGQKPVRFQLEEDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIMASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPSSTTINRNRLGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAVASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSEKENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcagctagctctgagtaaaacttttggtcagaaaccggttagatttcaactcgaagaa
gatggagacttttacatggttggatcagaggtggggaactacctacggatgttccgaggt
tctctttataaacgatatccttcgttatggaggaggctagcctcagtggaagagaggaag
aagatcatggcttcatcacacgccaccagcgtgacactgctgaaggcgtcagagtgtgaa
gagatctttgaaggaaacgatgagaagtacaaggctgtgtccatcagcaccgagccgccc
gcctacctcagggagcagaaggccaagcggagcagtcagtgggttcctacgttacccaac
agttctcatcatttagatgccgttccttcttcaaccaccatcaacaggaaccgtctgggt
cgggacaagaagaggaccttccctctgtgctttgatgaccatgaccccgcagtgatccat
gaaaatgctgcgcaggtcgaagctctagttccgattcgtctggacatggagatcgacgga
cagaagctgcgggacgccttcacgtggaacatgaacgagaagctgatgaccccggagatg
tttgcagagattctgtgtgacgatttggacctgaaccccctggcatttgtcccggctgtg
gcctcagccatccgtcagcagatcgagtcgtaccccacggacagcatcctggaggagcag
gcagaccagagagtcatcatcaagctgaacatccacgtggggaacatctccctggtggac
cagtttgagtgggacatgtctgagaaggagaactccccagagtcgttcgctctgaagctc
tgctcggagctcggtctgggcggggagtttgtcaccaccatcgcctacagcatccgtggt
cagctgagctggcaccagaggacctatgccttcagtgagaaccctctccccacggttgag
attgccatcaggaacacaggagatgcagaccagtggtgccccctgctggagaccctcaca
gacgctgagatggagaagaagatccgagaccaggaccggaacacaaggagaatgagacga
ctggccaacactgccccctcctggtag

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