Nematolebias whitei (Rio pearlfish): 119424922
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Entry
119424922 CDS
T08042
Symbol
oclna
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03272
Virion - Hepatitis viruses
nwh04514
Cell adhesion molecules
nwh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119424922 (oclna)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119424922 (oclna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119424922 (oclna)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nwh01009
]
119424922 (oclna)
Protein phosphatases and associated proteins [BR:
nwh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119424922 (oclna)
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Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
SUR7
CCDC90-like
Glucos_trans_II
Swi5
DUF4064
YldA
DUF6674
NnrU
DUF6057
TRPM_tetra
PUMA_CC
DUF6594
Motif
Other DBs
NCBI-GeneID:
119424922
NCBI-ProteinID:
XP_037548368
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All DBs
Position
18:40377051..40392430
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AA seq
497 aa
AA seq
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MSSRPNGSPPPYEEEKGYSVAASQPAYSYYPDDEFQHFYRWTSPPGILKIMAILVIVLCV
AIFACVASTLAWDSQGVMAGYGGSYGGSYGTMSGGYNSFGGGAYGAGNNYGYGSLGGNYN
DPRSGKAFMIVMAIIVGIFVLVVFIIIVSHKSLSESRKFYLAVVIICAILALFMLIASIV
YLMAVNPTAQSTGSIYGNQIAGLCAQYQQPQLSGVFVNQYLYHYCVVEPQEAIAIVFGFL
VTAALIIMLVFALKTRQKIQSFGKSNIFWKKVKPVDDIGPPQGTSVEAWVNDVSAVPPAA
LVADYPEKLRGSRSYLDDETISYDKPPVSYTPLPVVEDRPVQSATPYSANSEITSSAGRP
KKRRPGRPRRTDGQDYDTDYNSSGDELDDNDFDGEFPPIKNEQQRNDYKHEFDRDHQEYK
DLQAELDTVNKNLSELDNELDQLEDGSPQYLDALDEYNRIRSLKKSSDYQVKKRRCKYLK
QKLNHIKTQVNSFDRMA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaggcccaatgggagtccacctccttatgaggaggagaaaggatacagtgtt
gctgcgtctcagccggcctattcttactaccccgatgatgagttccagcacttctatcgc
tggacgtcccccccgggcatcctgaaaatcatggccatcctcgtcatcgtgttgtgcgtg
gccatatttgcctgcgttgcctcaacgttggcgtgggacagtcagggagtcatggctggc
tatgggggcagctacggtggaagctacggaaccatgagcggcggatacaacagttttgga
ggcggtgcatatggagctggaaacaactatggctacggctcactcggaggaaactacaac
gacccccggtcaggcaaagcgttcatgattgtaatggcaatcattgtgggcatatttgtc
ctggtggtcttcatcatcattgtgtctcacaagagcctgtcggagagcaggaagttctac
ttggctgtggtgatcatctgcgccatccttgcactgttcatgctcattgcctccattgtg
tacttgatggcagtaaaccccacggctcaatcaactgggtccatttatggcaaccagatt
gccggtctgtgtgctcagtaccaacaaccacagttgtcaggagtgtttgtgaatcagtac
ctttaccactactgtgtggtggagccacaggaggccatcgccatcgtgttcggcttcctg
gtgaccgccgctctgatcatcatgctcgtcttcgcgctcaagactcgtcagaaaattcaa
agctttggcaagagcaacattttctggaagaaagtgaagcctgtagatgacattggacca
cctcaggggacctcagtggaggcgtgggtgaacgacgtgtctgctgttcctccggctgct
ttggtggcggactaccccgagaagctgcgcggctccaggagctacctggacgatgagacc
attagttacgacaaacctcccgtcagctacacccccctacctgttgtcgaagatcggccc
gtgcaaagtgccactccttacagcgctaactctgagatcacaagttcagcaggacgtccc
aaaaagaggcgtccaggccgtcctcgccgcactgatgggcaggattacgacacggattat
aactcctctggtgacgaactggacgacaacgactttgacggtgagttccctccgataaaa
aacgaacagcaacgcaacgactacaagcatgagtttgaccgggaccaccaggagtacaaa
gacctgcaggcagaactggacaccgtgaacaagaacctgtcggagctggacaacgagctg
gaccagctggaggacggaagtcctcagtacctggacgctctggatgagtacaacaggata
aggagcctcaaaaagtcttcagattatcaggtgaagaagcggaggtgtaaatatctgaag
caaaaactgaaccacatcaagacgcaggtcaatagtttcgaccgcatggcctga
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