Nematolebias whitei (Rio pearlfish): 119424958
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Entry
119424958 CDS
T08042
Symbol
ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119424958 (ppwd1)
03110 Chaperones and folding catalysts [BR:
nwh03110
]
119424958 (ppwd1)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
119424958 (ppwd1)
Spliceosome [BR:
nwh03041
]
Complex C
Other components
PPlases
119424958 (ppwd1)
Chaperones and folding catalysts [BR:
nwh03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
119424958 (ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_2nd
WD40_Gbeta
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
119424958
NCBI-ProteinID:
XP_037548408
LinkDB
All DBs
Position
18:complement(11121016..11131363)
Genome browser
AA seq
626 aa
AA seq
DB search
MATDENNVVLKRKAHDGLDVDEEGEDAEWVGPMPSEATKTKKRKVLEYERVYLDNLPSAA
MYERSYMHRDVITHLVCSKTDFVITASQDGHVKFWKKKEDNGIEFVKHFRSHLGVMESIA
VSAEGALLCSVGDDQAMKVFDVVNFDMINMLKLGFHPGQCEWIYNPGDAICTVACSEKST
GRIFVYDGRGSNEPLHVFDKMHSCPLSQIRLNPKFRVIVSADKAGMLEYWTGLPNEFKFP
KHVDWEYKTDTDLYEFAKHKTYPVSLAFSPDGKKMATIASDRKVRIFRFLTGKLMRVFDE
SLTMFTELQQMRQQLPDMEFGRRMAVERELEKVDAVRLTNIIFDETGHFVLYGTMLGIKV
INVETNRCVRILGKQENIRVVQLCLFQGVAKAMNVAPTVEMKASDNPALQNLEPDPTIFC
TAFKKNRFYLFTKREPEDTKSADSDRDIFNEKPSKEEVMAATQAEGPKRVSDSAIIHTTM
GDIYIKLFPVECPKTVENFCVHSRNGYYNGHIFHRVIKSFMIQTGDPTGTGMGGESIWGG
EFEDEFHTTLRHDRPYTLSMANAGPGTNGSQFFVTVVPTPWLDNKHTVFGRCTKGMEVVQ
RISNAKVNPKTDKPYEDISIINITIK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatgaaaataatgtggtgctgaagcgaaaagctcacgatggcttggatgta
gatgaggaaggagaagatgcagagtgggttggacccatgccgagtgaagcaacaaaaaca
aagaaacgaaaagttcttgaatatgaacgggtctacttggacaatctgccatcagctgcc
atgtacgagcggagctacatgcaccgagatgttatcacgcatttagtttgttccaagaca
gactttgtcatcaccgccagccaagatggccatgtcaaattttggaaaaagaaagaggac
aatggaatagagtttgtgaaacactttcgaagccatcttggtgtgatggaaagcattgct
gtcagcgctgaaggagctcttctctgctctgttggtgatgatcaggccatgaaagtattt
gacgtggtcaactttgacatgatcaatatgctgaagttgggatttcatccaggccagtgt
gagtggatatacaaccctggagatgctatttgcactgtggcttgctcagaaaaatccaca
gggaggatctttgtgtatgatggaagaggaagcaacgagccccttcatgtctttgacaaa
atgcactcttgtcctctgtcccaaattcgcttgaatcccaaattcagagtcattgtgtcg
gctgacaaagcaggaatgctcgaatactggacaggccttccgaacgaattcaaatttccc
aaacacgtggactgggagtacaaaacagacactgatttgtatgagtttgcaaaacataaa
acctatcctgttagtctggccttctcccctgatgggaagaaaatggccaccatagcttct
gacaggaaagtgaggattttccgtttcctgactggaaaactgatgcgagtgtttgatgaa
tctttaacaatgttcacagagttgcagcagatgaggcagcagctgcccgacatggagttt
gggaggcgaatggctgtggagagggaacttgagaaggtggatgctgtcagactgacaaat
attatctttgatgagacgggccactttgttctgtacgggactatgctgggcatcaaagtc
atcaatgtagaaaccaacagatgtgtgcgaatccttggaaagcaagagaatatccgagtg
gttcagctttgcttgttccagggggttgcaaaggccatgaatgtggcccccacagtggaa
atgaaggcctctgacaaccccgccctgcagaacttggagcccgaccctaccatcttctgc
actgccttcaagaagaaccgcttctatttgttcacaaagagagaaccagaagacacaaag
agtgcagactctgacagagacatctttaacgagaagccttcgaaggaggaggtgatggct
gccactcaggctgagggtcccaagagagtgtctgacagcgccatcatacacaccaccatg
ggagacatctacattaagctttttcctgtggagtgcccaaaaactgtggagaacttctgc
gttcacagcagaaatggatactacaatggacatattttccaccgagtcattaagagcttc
atgatccagacaggagaccccactggcacaggcatgggaggagagagcatctgggggggg
gagttcgaggacgagtttcacaccaccctgagacacgaccgcccgtacacgctcagcatg
gcgaatgcaggacccggcaccaacggctcccagttcttcgtcaccgtggtcccaactcct
tggctggacaacaaacacaccgtgtttggaaggtgcactaaaggcatggaggtggtccag
aggatctccaatgccaaagtcaaccccaagacagacaaaccgtatgaggacatcagcatt
atcaacatcaccataaagtga
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