Nematolebias whitei (Rio pearlfish): 119424998
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Entry
119424998 CDS
T08042
Name
(RefSeq) CSC1-like protein 2
KO
K21989
calcium permeable stress-gated cation channel
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119424998
Transporters [BR:
nwh02000
]
Other transporters
Pores ion channels [TC:
1
]
119424998
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
Zip
RSN1_TM
DUF7198
Motif
Other DBs
NCBI-GeneID:
119424998
NCBI-ProteinID:
XP_037548483
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All DBs
Position
1:51141277..51173006
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AA seq
1075 aa
AA seq
DB search
MYPVFILTVTMTVSVVQGCSSSESCSTTPTPNATSRDYCYSARIRSTVLQGLPFGGVPTV
LALDFMCFLALLFVFSILRKKAWDYGRLALVNDADRVAEQRYSRLDDRDYMNFSCVSVPC
EPHKQDTYRESMGSTVPSEISERYERLTSVSSSVDIDQRDYGFCSWLTAVFRIKEDEIRE
KCGEDAVHYLSFQRHIIGLLAIVGVLSVGIILPVNFSGNLLDNDAYNFGRTTIGNLDADN
ALLWLHTTFAFLYLLLTVISMRRHTSRMHYKEDDLVKRTLFVNGISKYVEENEIKQHFEQ
AYENCSVLEARLCYDVAKLMYLNSERKKTERSKKFFLDLQAKEHDKTMINPKPCGHLCCC
IIKGCEQEEAVSYYTKLEAQLKDEYRKEREKVNKKPLGMAFITFQNESITAIILKDFNAC
KCQGCKCRREPKVSQFSSRLNVRNWTVSYAPDPQNVYWEHLSVGGASWWLRFFIINCVLF
LLLFFLTTPAIIITTMDKFNVTKPVEYLNNPIITQFFPTLLLWSFSALLPTIVYYSAFFE
AHWTRSGENRTTMHKCYTFLIFMVLLLPSLGLSSLDVFFRWLFDKKFLSDAKVRFECVFL
PDNGAFFVNYVIASAFIGNANDLLRIPGLLMYMIRLCLARSAAERRNVKKHQAYEFQFGA
AYGWMMCVFTVVMTYSITCPIIVPFGLMYMLLKHLADRYNMYYAYLPTKLDKKIHSGAVN
QVVAAPILCLFWLLFFSTVRSGFSAATSKFTFAILIITIIICLSHVCFGHFKYLSAHNYK
IDQEVDGMENGRSVRPSSATKKSLQFVSILGAGLLCGTALAITIPEGVGLLEDSWRAPSS
SSDELLSLNTSEKTNSSSEEATPPRFYIGVALTFGFTFMFAVDQIGGYLSTRDQTVHTTN
RVHITATLGLVIHSAADGFALGAAVATGQVTVQVIVFFAVILHKAPAAFGLVSFLMHAGL
EKKHIQGHLLAFSAAAPVVAISTYFILHSSGNSAENQLSATGVGMLFSAGTFLYVATVHV
LPEISNSRKEEPLSDLQELPEAESHGQRHLGLLESLTLILGVGLPVVMAFGLHDD
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtacccggtgtttatattaacagtgaccatgaccgtgtcggtggtgcaagggtgctcc
agttcagagagctgcagcacaacaccaacacccaacgcaacttctagagactactgttac
tctgctcgaatacgcagcacagtcctccaaggactgccgtttggtggcgtgcctactgtc
cttgcccttgactttatgtgctttttggcgctgctgttcgtgttttccatcttgaggaaa
aaagcatgggactacgggcgccttgccctggtgaacgatgccgacagagtagcggaacag
cgatacagtcgtttggatgatcgagattacatgaacttctcctgtgtgagcgtgccgtgt
gagccacacaaacaggacacgtacagggagagtatgggttccactgtgccatccgagata
tctgaacgctatgagcgtctcacctctgtgtcaagctctgtggacattgatcagagagac
tacggcttctgctcctggctgactgccgtctttcgcatcaaggaggacgagatcagggag
aagtgtggtgaagacgcagtgcattacttgtcttttcagcgtcatatcattggcctgctg
gccatcgtgggtgtactatctgtgggcatcatcttacctgttaacttctcaggaaacctg
ctagacaacgatgcgtataattttggacgaactacaattggtaatctggatgcagataat
gcactactgtggctgcacactacgtttgcatttctctacctgttgctgactgtgatcagc
atgaggcggcacacgtctaggatgcactacaaagaggacgatctggtgaaacgcacttta
tttgttaatggcatctccaaatatgttgaggagaatgagataaagcaacacttcgaacaa
gcttatgagaactgcagtgttctggaagctcgcctctgttacgatgtggccaagttgatg
tatctcaactctgaacggaagaagacagagcgcagcaagaagttctttcttgacctgcag
gccaaagagcacgataaaaccatgatcaacccaaaaccctgtggacacctttgctgttgt
atcattaaaggctgcgagcaggaagaagctgtgagctattacaccaagctggaggcccaa
ttaaaagatgaatacaggaaggagagagagaaggttaacaagaaacctttaggaatggcc
ttcatcacctttcagaatgagtccataactgccataatcttaaaggactttaatgcgtgc
aagtgtcagggctgtaagtgccgtcgcgagcccaaagtgtctcagttcagctccaggctg
aacgtacgcaactggaccgtcagctacgctcctgatccacaaaatgtctactgggagcat
ctgtcggtgggaggagcctcctggtggctccgctttttcataatcaactgtgtcctgttc
cttctcctcttcttcctcaccacccctgccatcatcatcaccaccatggacaagttcaat
gttaccaaaccagtggagtacctaaataatccaatcatcacccagttcttccccaccctt
cttttatggtctttctctgctttgcttcctaccattgtctactactctgccttcttcgaa
gcccattggactcggtcaggagaaaacaggaccacgatgcacaagtgctacaccttccta
atctttatggtcctgttgctgccctctctaggactcagcagtttggatgttttcttccga
tggctttttgacaaaaagtttttgtcagatgctaaagtgcgatttgagtgtgtcttcctt
cctgacaatggcgccttctttgtgaactatgtgattgcgtctgcgttcatcggtaacgcc
aatgaccttctgaggatccctggtttgctcatgtacatgatccgcctgtgcttggctcgc
tctgcggctgaacggaggaatgttaaaaagcatcaagcctatgagtttcagttcggagca
gcttatggctggatgatgtgtgtcttcactgtggttatgacctacagcattacttgcccg
atcatcgtcccgtttgggttgatgtacatgctactcaaacacctggcggacaggtacaac
atgtactatgcctacctgccgaccaaactggacaagaaaatccattctggagccgtcaac
caagtggtggctgcaccaattctctgcctcttttggcttcttttcttttccactgtccgt
tctgggttctccgctgcaacatccaagtttacctttgcgattctgatcatcaccatcata
atttgcctttctcatgtctgctttggacattttaaatatttaagtgcccacaactataag
attgaccaggaggtggatgggatggagaacggaagatcggtgcgaccctcttctgcaacc
aagaaaagcctgcagtttgtttccattctgggagcaggactcctgtgtgggacagcactc
gccatcaccatccctgaaggtgtgggtttactggaggattcatggagagcaccctcctct
tcctctgatgagctgctcagtttgaacaccagtgaaaagacaaactcttcctcagaggaa
gccaccccgcctcgattctacatcggggtggctttaacgttcgggttcaccttcatgttt
gccgttgaccagattggaggttacctttccacgcgtgaccaaacagtgcatacgacaaat
cgtgtccacatcacagccaccctggggctggtcattcattctgcagctgatggatttgct
ctgggtgctgctgtggccacaggtcaggtgaccgtgcaagtcatcgtattttttgccgtc
attctacacaaggcgcctgcagcttttggtttggtctcctttctgatgcacgccggcctc
gagaaaaaacacattcagggacatttactggccttctcagccgcagctccggtagttgcc
atcagcacttacttcatcttgcactcgtctggaaattctgctgagaaccagctcagtgcc
acaggcgtgggcatgctcttctcagctgggacgttcctctacgtggccaccgtgcacgtt
ctccctgaaatcagcaacagccggaaagaagagccgctctctgacctccaggagctcccc
gaagccgagagccacgggcagcggcacctggggctcctggagagcctcacgctcatcctc
ggcgtggggcttccggtcgtgatggccttcggactgcacgatgactaa
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