Nematolebias whitei (Rio pearlfish): 119425005
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Entry
119425005 CDS
T08042
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04068
FoxO signaling pathway
nwh04110
Cell cycle
nwh04120
Ubiquitin mediated proteolysis
nwh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119425005 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
119425005 (skp2)
04150 mTOR signaling pathway
119425005 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119425005 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119425005 (skp2)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119425005 (skp2)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_NXF1-5
LRR_At5g56370
LRR_9
Motif
Other DBs
NCBI-GeneID:
119425005
NCBI-ProteinID:
XP_037548455
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All DBs
Position
18:2294462..2297318
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AA seq
412 aa
AA seq
DB search
MSKDSSVVPLQDLSWTSLRGGRIRTKRRSRDLLGPDSEYTPTESVQRLPPPHKVPLLVSR
GKENQFVLARRSRRTRESTSGVSWNHLPEELLLRIYLYLPLQDLLRVSGVCRRWNRLAFD
ESLWHSVDLEGLTHMGLALQQVLKTRVRRLRCPRAFVEDLQFTGSSPLQIVELDLSSSVI
PTWVLQNLLRCCRQLQYLSLEGLQLSDDIIRCLLKNPGLLQLNLGGCSNMSAGAVGALLR
SCWRLKQLNMSWCSFSSEHVQNLVQNLSSAVSDLNLSGYRDTLTLDDVKVLVARCPNIQT
LDLSDSTLLTADVLPVLQQLKVLVHLSLSRCYHLHLAALSDLGRTLPSLRFLDVFGLVQE
NQLPVLKKELSLININSRPFSCVARPTPATRTGLLQPDRSMWDRTCRLRVRF
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagacagcagcgtggtgcccctgcaggacctgtcctggaccagcctgaggggg
ggcaggatcaggaccaaacgccggtccagggacctcctgggtccggactccgagtacacc
ccaacagagtccgtccagcggctcccgcctcctcacaaagtcccgctgctggtcagcaga
ggcaaggagaaccagtttgtgctggctcggaggtccaggaggaccagagagtccacttca
ggtgtctcctggaaccatctacctgaagaactgctcctcaggatctacctgtacctgccc
ctccaggacctgctcagggtctctggggtctgcaggcgctggaaccgcttggcgtttgac
gagtctctgtggcacagtgtggacctggagggcctgacccacatgggcctggctctgcag
caggttttgaagacccgggtccgcaggctgcgctgtcctcgagcgtttgttgaagacctg
cagttcacagggtccagcccgctgcagatagtcgaactggacctgtccagttccgtcatc
ccgacctgggttctgcagaacctgctgcggtgctgcagacagctgcagtacctgagcctg
gaggggctgcagctgtctgatgacatcatcaggtgcctgttgaagaacccgggcctgctg
cagctgaacctgggcggctgctccaacatgtccgccggtgccgtgggggccctgctccgg
tcttgctggaggttgaagcagctgaacatgtcgtggtgcagcttcagcagcgagcacgtc
cagaacctggtccagaacctgagctccgcagtgtcggacctgaacctgagcggctacaga
gacactctgactctggacgacgtgaaggttctggtggccagatgtccaaacatccagacc
ctagacctgagtgacagcactctgctgacagctgacgtcctcccggtcctccagcagctg
aaggttctggtccatttgtctctgagtcggtgctaccacctccacctggctgctcttagt
gacctgggcaggacgctcccatccctccggttcttggacgtcttcggtctggtccaggag
aaccagctgccggttctgaaaaaggagctgtccctcatcaacatcaactccagacccttc
tcctgcgtggcccggcccactccggccaccaggaccggcctgctccagccagaccgcagc
atgtgggacaggacgtgccgcctcagggtccggttctga
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