Nematolebias whitei (Rio pearlfish): 119425010
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Entry
119425010 CDS
T08042
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119425010 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119425010 (myo5b)
04131 Membrane trafficking [BR:
nwh04131
]
119425010 (myo5b)
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119425010 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119425010 (myo5b)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119425010 (myo5b)
mRNA cycle factors
P-body specific factors
119425010 (myo5b)
Membrane trafficking [BR:
nwh04131
]
Others
Actin-binding proteins
Myosins
119425010 (myo5b)
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119425010 (myo5b)
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119425010 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
AAA_16
AAA_22
Ac76
Motif
Other DBs
NCBI-GeneID:
119425010
NCBI-ProteinID:
XP_037548459
LinkDB
All DBs
Position
18:2602256..2743604
Genome browser
AA seq
1642 aa
AA seq
DB search
MSVNELYTKFTRVWIPDQDEVWKAAEINKDYKEGEPVLHLQLEDGTTLEYQVGPKSSPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNHIYTYCGIVLVAINPYEQLQIYG
EEVITAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSSSDANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIVFSRHYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFEDLSLTSAEDFTYTSLGENIFIEGVN
DAEDFLKTREAFSLLGVKESSQSSIFKVLASILHLGNVEIVAERDGESCRLLRSDVHLKH
FCRLLGVELQQMEHWLCHRKLATASETYVKTMSCRQAVNARDALAKHIYARLFDWIVEHI
NKVLQTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQNSSSAHFQK
PRMSNISFIIIHFADKDPDMFQFGKTKIFFRAGQVAYLEKLRTDKFRSACIKIQKTVRGW
LQRIRYHKIRRSAITLQRYGRGYLARRYAEFLRLNRAALICQKQYRMVREQRNFLRIRQA
VVTIQAYTRGMFTRRIYWEFLLHHKAMIIQKNVRGWLQRQRFRRARAAAIIIQCGFRRLQ
AKKQLNQLKIEARSAERLKKLNTGMENKIMQLKRKMDEQSIEMKSQNEQLLTVNTSLGSE
VTKLQKELDLIRGQQVEGGQVLSLQEQVERLQEELQEAQAERKRLLEEHSNEKMHLTQRL
EELETENSLLKSEKEELNQRILQQSKTSAEETSSASQQSELDGERQRYQNLLKEFSRLEQ
RYDNLKEEMSLSKFHPSHQRNPSNQSSLESDSNYPSFSTSEVGDTEDSIQLVEEMGVEKA
AMDISLFMKLQKRVRELETERKRLQVNLDKVEELAKHRSSEAKITSSEHETSDLAYNNLK
RQELETENKKLKNDLNELRKTVAERASQNNSSNELQDSYNLLLSQLKSANEELDARREEV
LILRTQIVSSAQLQESSQNTESEKESELNNSTEPMDKEEALQAYHGLCESKKLLEAQLQT
QTRQHRDELEALHTQIELLKEDLEKKQDILNYMGSLSPDAKVEYSVQQEITRLTNDNLDL
KEMVEKLEKNERKLKKQLRIYMKKVQELEATHAAAQNRNTKPELIRQVTVQRKEKDFEGM
LEYNKEDEAQLIKTLITDIKPNSVSATVPCLPAYILFMCIRHADYMNDDQKVESLLTSTI
NAIKKALKRNNDDFEMMSFWLANSSRLLHCLKQYSGDETFMTQNTPKQNEHCLKNFDLAE
YRQVLSDMCIQIYQQLIKVAEGNIQPMIVSAMLESESIPSLAGVKPMGYRNRSSSLDTDA
DGPTSYTLQTLIRQLSQFNSIMRDHGLDPEIVGQVVRQLFYNINAITLNNLLLRKDICSW
STGMQLRYNTSQLEEWLRANNLFQSKAAATLEPIIQAAQLLQVKKKTSQDAEAICSLCTA
LTTQQIVKILNLYTPLNEFEERVTVSFIRNIQNLLQERNDPPQLLVDTKQTFPVLFPYSP
SALSLEMIHMPTSLGLDFLIRV
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacgagctgtacaccaagttcacccgggtctggataccggaccaggacgag
gtgtggaaggctgcagagatcaacaaagactacaaggaaggggagccagttctgcatctg
cagctggaggatggaacaaccctggagtaccaggtgggtccgaagtccagcccactgccg
ttcctgcggaacccggacatcttggtgggggagaacgacctgacggcacttagttacctc
catgaacctgctgttctacacaacctgagggtccgcttcctggaatccaaccacatctac
acttactgcggtattgtcctggtggccatcaacccatacgagcagctgcagatctatgga
gaagaggtgatcacggcctatagtgggcagaacatgggggacatggacccacacatcttt
gctgtggctgaggaggcctacaaacaaatggccagagatgagaggaaccagtccatcatt
gtgagtggagaatctggagcagggaagacagtgtcagctaaatatgctatgaggttcttc
gccactgtgggtggctcatccagtgatgccaacgtggaggagaaagttctggcctccaat
ccaatcatggaggccattggaaatgcaaaaaccacccggaatgacaatagcagccgcttc
gggaagtacatccagattgttttcagccgacactaccacatcatcggggctaacatgagg
acctacttgctggagaagtcccgggttgtttttcaggccgaggacgagcggaactatcac
attttctaccagctgtgtgcctctgccagtttaccagaatttgaggatctgagcctcacc
agtgcagaagatttcacgtatacgtctttgggagagaacatcttcatcgaaggggtgaac
gacgctgaagatttcttaaagaccagagaagcattcagcctgctgggtgtaaaagagagc
agtcagagcagtatctttaaggttctggcctccatcctccacctggggaatgtggagatc
gtggcagagcgtgatggagagtcctgccgtctcttgagaagcgacgtccacctgaagcac
ttctgcaggctgttgggggtggagctgcagcagatggagcactggttgtgccacaggaaa
ctggccacggcgtctgagacctacgtgaagaccatgtcctgcagacaggcagtcaacgcc
cgtgacgcactcgccaagcacatctacgcacggctcttcgactggattgtggaacacatc
aacaaagtcctgcagacctcctccaagcagcactccttcatcggagtcctggacatctat
gggtttgagacattcgaggtgaacagcttcgagcagttctgcatcaactacgccaacgag
aagctgcaacagcagttcaactctcatgtctttaaactggagcaggaggagtacatgaag
gagcagatcccctggaccctcatcgacttctacgacaaccagccctgcatcgacctgatc
gaggcccgactcgggatactggacctgctggatgaggagtgcaaggttccgaaggggaca
gatcagaactgggcccagaagctctacaagcagaactccagcagcgcacacttccagaaa
ccccggatgtccaacatctccttcatcatcatccactttgctgacaaggaccctgatatg
ttccagtttggaaagacaaagatcttcttccgagcaggtcaggtggcttacctggaaaag
cttcggaccgataagttccgatcggcctgcatcaagatccagaagacggtccgaggctgg
ctgcagaggatccggtaccataagatccgcaggtctgccataaccctgcaaagatatggt
cgaggatacctggctcgcaggtacgcagagtttctgcgtttgaaccgggctgccctcatc
tgtcagaaacagtaccgcatggtccgagagcagagaaacttcctgaggatcaggcaggct
gtggtcaccatccaggcctacacccgaggaatgttcacacgcaggatctactgggagttt
ctgctgcaccacaaggccatgatcatccagaagaacgtgcgcggctggttgcagagacag
aggttcagacgagcacgtgccgccgccatcatcatccaatgtggcttcagacggctgcag
gccaagaaacagctgaatcagctgaagatcgaagctcgctctgcagagcgcctgaagaag
ctcaacaccggcatggagaacaagatcatgcagctaaagaggaagatggacgagcagtcc
atagagatgaagtctcagaacgagcagctgctgactgtcaacacctccctgggctcagag
gtcaccaagctgcagaaggagttggatctaatccggggccagcaggttgagggaggccag
gtgctgtcactgcaggagcaggtggagaggctgcaggaggagctgcaggaggcgcaggcc
gagaggaagaggctgctggaggagcacagcaatgagaagatgcacctcacacagaggctg
gaggagctggagaccgaaaactctctgctgaagagcgaaaaggaagaactgaaccaacgc
atcctgcagcagtccaagacctctgcagaggagacaagtagcgcctcccagcagtccgag
ctggacggtgagcggcagcgctaccagaacctcctgaaggagttctccagactggagcag
agatacgacaacctaaaggaggagatgtctctgagcaagttccaccccagccaccagagg
aacccatccaatcagagcagcctggagtcagactccaactacccatccttctccacctct
gaggtgggagacaccgaggactccatccagctggtggaggagatgggggtagagaaggct
gccatggacatcagtctgttcatgaagctgcagaaacgagtgcgagaactggagacggag
aggaaaaggctgcaggtcaacctggacaaggtggaggagctagcaaagcacaggagttca
gaggccaaaattacctcttctgagcatgagacctcagatctggcctacaacaacctgaag
agacaggaactcgaaacagaaaacaaaaaactgaagaacgacttgaacgagctgaggaag
actgtcgctgagcgagcgtcacagaataactcatccaacgagctgcaggacagctacaat
ctcctgctgagtcagctgaaatcagccaatgaggagctggatgcccgcagggaggaggtg
cttatcctcaggactcagatagtgagcagcgctcaactgcaggagagcagccaaaatact
gaatctgagaaggaatctgagctgaacaacagcacagagccgatggacaaagaggaggcg
ctgcaagcatatcatggactctgtgagtccaaaaagctcctggaggcccagctgcagacc
caaactcggcagcaccgggatgagctggaggctctgcacactcagattgagttgctgaag
gaggacctggagaagaagcaggatatcctgaactacatggggtctctgtctccggacgcc
aaggtggagtacagtgtccaacaggagatcactcggctcaccaacgataatctggacctg
aaagagatggtggagaagctggagaagaatgagaggaagctgaagaagcagctaaggatc
tacatgaagaaggtccaggagctggaagccactcatgctgcagctcagaaccggaacacg
aaaccagagctgatccgtcaggtgaccgttcaaaggaaagagaaggactttgagggaatg
ctggagtacaacaaggaggacgaggcccagctcatcaagaccctcatcacagacataaaa
cccaactcagtgtcggccacagtcccctgtctgcccgcctacatcctcttcatgtgcatc
cgccacgctgactacatgaacgatgaccagaaggtggagtctttactcacctctaccata
aacgccatcaagaaggccctgaagaggaacaacgatgactttgagatgatgtcattctgg
ttggctaacagcagccggttgctgcactgcctgaaacagtacagtggagatgagaccttc
atgactcagaacacccctaagcagaacgaacactgtctgaagaacttcgacctggccgag
taccggcaggttctgagtgacatgtgcatccagatctaccagcagctaatcaaggtggcc
gagggcaacatacaacccatgatcgtgtcagccatgttggaaagtgagagcatcccgagt
ctggcaggcgtgaagccgatgggctacaggaaccgctcatccagcctggacacagacgcc
gatggccccaccagctacaccctgcagactctgatccgacagctgagccagttcaacagc
atcatgcgggaccatggactggatcccgagatagtgggccaggtggtccgacagctgttc
tacaatatcaacgccattaccctgaacaacctgcttctgcggaaagacatctgctcatgg
agcactggcatgcagctcaggtacaatacgagtcagctggaggagtggctccgagccaac
aaccttttccagagtaaagctgctgcaacgctggagccaatcatccaggcggctcagctg
ctgcaggtcaagaagaagacatctcaggatgctgaggccatctgctctctctgcacagcc
ctcaccacgcagcagattgtgaaaatcctgaacctctacacacctctgaacgagtttgaa
gaacgagtcactgtgtccttcatcaggaacatccagaatctcctccaggagagaaatgac
cctcctcagctcctggtggacaccaaacaaaccttccctgtcctgttcccatactctccg
tccgctctgagcctggagatgattcacatgcccacctccctcggactggacttcctcatc
agggtctga
DBGET
integrated database retrieval system
