Nematolebias whitei (Rio pearlfish): 119425041
Help
Entry
119425041 CDS
T08042
Name
(RefSeq) transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119425041
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
119425041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
119425041
NCBI-ProteinID:
XP_037548495
LinkDB
All DBs
Position
18:12560059..12583605
Genome browser
AA seq
2293 aa
AA seq
DB search
MFRRSRFSVRPNVSTVGRTTAGTSQEPPAAANHEVSEKPKEAGDGAAAVIDKSNGTPSEN
ITASGDGNEQNGEGTSSSASVQRRKRFSIKPKVTPGRPPALTRTPKSPVKAACATPADVS
GSDTEKPSTSSKAATATAPRGLQSPRRRRLYEDGKQLKVQSVHHPPVSSETSGTVTISSP
KDSSEQTHLPTAGSKQAENPSGCQVKEVSPRLPEKVPPSLPDKEATEMSEKAKTLISSKH
VVSMTPSALSLSRLLNDPSDVQRLMKAQKLRELLRHERFKEKKFKKAKTRQKEFTLDPTK
MTMRDLIHYLPLSNPMMSNLEGVAQEDETVIPPSPRREKSPERAQQAGVLPDPTTLREEE
EGGDAATEEEQDEALMVPQVKVAEDGSLIIDEESLTVEVQRAKGPNPAQDREPIFERGST
TTYSSFKKAHYAKPWSIEETDMFFLAVSMVGTDFSMICQLFPHRARLEIKNKFKKEEREN
SWRIDKAFKEKRKLDLEYFTKLLEKVMEFQKNKKKLKSLSKKNATQKIRTKAKRKKSAKS
LSDVEEEEEDESLESEDGGEKENEDQCNEGGVPASDPKKSCKRKKRTESLTEEPNEKITK
MGEADVPEDSETALPEDQTSSDMPEKDAVTKPAKLSRGRASKPLLPLGLKRGNKVPPARK
CTEATANKEESSSCDKASEEQVNEEKSDLSCANSRKSASDEVSSEDEAAVKPQRPTRYGR
VPKPIQPLTYPSKEDPHASESETTPAKSKCVVKRGKLSTQQSSQKVKKPKLVTIRSSKSD
FSDEESENEFENNQMEGEHLGCRSSKDAEASLFVPSSLHLTNMVVSEVDDAMVELDILDS
MPDVLGISQDALFPDSSCQKAQDDTGTAEPCEHQLDLLVDVIDFLSSEHTEDSPDESYNE
AAQTLLTIGNLTHDSQSAQSEMTTQDFTKEITLDGVNASDHSEDDMAPSALEQSSTTLLC
PTYDQDVREASQTVCIVGLQSSEMDLPHIETSIQTCTELSTDPVSQLTSDSKSSKTSPVL
KTRCFVKVKPKPKLSQTLRTSQKKTEQHVVNERTSAEEVTPEQTAPALLEDNISSTEVKL
SEGMSSVTQTCSLSAPQFEPSRNQTTTDTRTPDSTEERLILHGETANTCNSAVAKSHQES
STLSDPLQESRDKHAPRASDEDSPVSQKEQCEVATSSKPKGNRFPKIKPKPNLTRTARAA
RNKPQVSEETVEKDTLSSLKPETESSSFSLKHTKQVKIQSKVANQAELDVTLDQSATENQ
NISEVQLTEDSRLTSEFTEENFMPQIGSADPTVAESQLPEGSNVALEATQEKSDNPATSI
DPVEERTVNKVASTCQLRRSRTQKTKPKPKVPQTSRAVRSKHQTTEEPGEKGSCPGSNPD
VPEKKIAELEQKSTSTFDKQTESYDSASCLKPPLTSGSSGTPLQEDQTNIGQDQINMETA
SDQSVVRKPNFSDLQPEEVAKETTSDTGFNSEFTGKNLSFLVETSESSCNNTVDSVGVEV
HPHLQLDSAPVQEQSGLFIKPAQDCKVASACPSKSRQLPKMNPKPNVPQTSPKFKPLEEP
TKKDSTSSPNVESQKKIMTKVQREPTCKSQREKQTQDQSKVHFELGVEQVARDVKSSEFK
DANLTSHVGTSHKCHNVALTSQSITQTQDGQESNPTSVRSGPPAASQEFLIQEKEVASAC
QLKRIRSQKIKPRPNLPQISRTARLKPRVSKKALDQDSSCTPPPDKTTNAEVETQPCLPE
KQSEDTDVGSDGGLDLGTSVESTSGNQNLFEVQPEQSLEQDASEMNSSKFKGTNLTSYVG
TSKICSYTEETADLRCRDSQVGKRATLDSTSLQDQSGHLPALVTSVERLAVGKQEGEPDL
SQDHVTAMQHLDKTQILILSSKFSDKTKEEEAEPTCSTWLPDNLNQNKRTDSSPVSSQLL
ESAPRCTEESSSCKEQLMPNIGQVAASEDAEQIIPQRRQRFPKVKPKPNLGSVKITRRNL
QSVDGSKHLEKQLVDSYSIVTSEQQPKESTKNKMSKDDGLETDLASSEHGKVKMSDTQPV
IDQTGITDVQSTRKETTSISHKTDSSDQSSDQMPSEMTASKAPAARRGRLIKPKPNLQRS
SRPQQPQQVQSTKPTEADSSSCSRGVGASVDHTSVCDLRPDHQGPSKGTVEKLDQKDSSS
NDARSSLGFVTQSTTQDESTSSAEGIFSHPLISEFLPAEVPSDPDEPFFILSLTAIPVSS
VVEGVNSASEHLPGLTVTDSLVHQPSTSLEAAGDAFVSTKERSVGICVDIGQEPAISQQG
SVVVACVFVTLTK
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgccggtccagatttagtgttcgccctaatgtcagtactgtgggcagaacgaca
gctggaacatctcaggaacctccagcagcagctaatcacgaggttagcgagaagcctaaa
gaagcaggggatggtgctgcagctgtgatcgataaatccaacgggacaccgtcagaaaac
atcacagcttcaggagatggaaatgaacagaatggggaaggaacaagctcctcggcatca
gtccagagaaggaagcggttttccattaagcccaaagtgacccctggccgcccccctgct
ctcactcgtacaccaaagtctcctgtcaaagctgcctgtgcaactcctgctgatgtttct
ggctcagacactgagaagccatcaacttccagcaaagctgcaacagccacagctcctcga
ggactccagtccccaagacgacgaagactctatgaagatggcaagcagctcaaagtccag
tccgtacaccatccgcctgtatcttctgaaacgtcaggaactgtgaccatttcttcacct
aaagactcatcagaacaaacccatctgccaacagctggcagcaaacaagcagaaaaccca
tcaggctgtcaggttaaagaagtttctcccagactgccagagaaagtaccaccatctcta
ccagataaagaagctacagagatgtcagaaaaagccaagactctgatatcatccaaacat
gtggtgtcaatgactccatcagctctctccttgagccgacttctgaatgacccgtcagat
gtacaaagactgatgaaagcccagaagctcagagagttactgaggcatgagcgattcaaa
gaaaagaaattcaagaaagcaaaaactcgtcaaaaggaatttactttagatcccaccaaa
atgacaatgagagacctcatccattatctccctttgtctaaccccatgatgtctaattta
gaaggcgttgctcaagaagatgaaactgtgatcccaccttcaccgaggagagaaaagtct
ccagagagggcacagcaagccggagtccttcctgatccaacaactttaagggaggaggaa
gaggggggagatgctgcgactgaggaagagcaggatgaagccttgatggttcctcaggtt
aaagtggcagaagatggctccctgatcattgatgaagaaagcctaacggtagaagtccag
cgagccaaaggaccaaatcctgcacaggaccgagaacccatctttgaacggggctccacc
acaacttactcgagtttcaagaaggcacattacgcaaaaccctggtctatagaagagaca
gacatgttcttcctggcagttagcatggtaggaacagacttttccatgatttgtcagctg
tttccacacagagctcgattagagataaagaacaaattcaaaaaggaagagcgagaaaat
tcctggaggattgacaaggctttcaaagagaagcgtaaactggacttggaatactttaca
aagctgctggagaaagttatggagtttcagaaaaacaaaaagaaactcaagtctctttct
aagaaaaacgccacccagaagatcaggactaaggcaaagcgcaaaaaatctgctaagagc
ctgagtgatgtggaggaggaagaggaggatgaaagtcttgagtcagaggacgggggcgag
aaggagaatgaagaccagtgtaatgagggaggagttcctgcttctgatccgaagaaaagt
tgtaaaagaaagaaaagaacagaaagcttgactgaggaaccaaatgaaaagataaccaaa
atgggtgaagctgatgtacctgaagactctgagacagctcttcctgaggatcaaacaagt
tcagacatgcctgaaaaggacgcagtcaccaaaccagccaagctctcgcgtggcagagcc
tcaaagccgctgctgccgctgggcttgaagcgaggtaacaaggtcccccctgccaggaaa
tgcactgaagcaacagcaaataaagaggagagcagctcgtgtgacaaagcctctgaagaa
caggtgaatgaagagaaatccgatttgagctgtgccaacagcaggaagtctgccagtgat
gaagtttcttcagaagatgaggctgcagttaaacctcagagacccaccagatacggcaga
gtccccaaacctatccagcccttgacttatccttctaaagaggatccacatgcctctgaa
tctgaaaccacgcctgcaaaatctaaatgtgttgttaagagaggaaaattgtcaacacaa
caatcctcgcagaaggtcaaaaagcccaaactggtcactatcaggtcctccaagtcagac
ttcagtgatgaggagagtgagaacgagtttgagaataaccagatggaaggtgagcacctt
ggatgcaggtccagtaaagatgctgaagcctctctgtttgtaccttcaagtctgcacctc
acaaatatggtggtctcagaagtggacgatgctatggtagagcttgacatcttggacagt
atgcctgatgtgctgggcatctcccaagatgcactgttccccgattcctcttgtcagaag
gcacaagatgacacaggcactgctgagccatgtgaacatcagttggacctgctggttgat
gttatagactttctttcatcagaacacacagaagattccccagacgaaagctacaatgaa
gctgctcagactcttttgaccattggcaacctgactcatgactcccagtcagcacaaagt
gaaatgaccacacaggattttacaaaggaaataacactagatggtgtgaatgcatctgac
cattctgaagacgatatggctccttctgcactagaacaaagttctacaactttactgtgt
ccaacttatgatcaagacgtcagagaagcatctcagactgtttgcattgtaggattacaa
agcagtgaaatggacttgcctcatattgaaaccagtattcagacatgcactgagctgagt
acagatcctgtctctcaattaacatcagattcaaagagctcaaaaacatctccagtcctg
aaaacaagatgcttcgttaaggtaaagcctaaaccaaaacttagtcaaactttgaggaca
tctcaaaagaaaactgagcaacacgtggttaatgaaagaacatcagctgaagaagtaacc
ccagaacaaactgctccagcattactagaagataacatttcttctactgaagtcaaatta
tcagaagggatgtcttctgttacccaaacctgttctttgtctgcaccccaatttgaaccc
agtaggaatcagaccaccacagatacaagaacacctgactctacagaagaaagactgata
cttcatggtgaaacagctaatacatgcaattcagctgtagcaaagagtcatcaagagtca
tccacactttcagatccactccaggaaagcagggacaagcatgctccacgtgcatctgat
gaggattcacctgtcagtcaaaaggaacaatgtgaagttgcaacttccagcaagcctaag
ggaaacagattcccaaaaatcaaacccaaaccaaatctaactcggacagcaagagctgca
agaaataaacctcaagtcagtgaagagactgtggagaaagacactctttcatcattgaaa
ccagagacagaaagctcgtcttttagtttgaaacacacaaaacaagtaaagatacaaagc
aaagttgctaatcaggcagaattagatgtgacattagatcagagtgccacagaaaaccag
aacatttctgaagtgcagctcactgaagactctaggttaacctccgagttcacagaagaa
aacttcatgccacagattggatcagctgacccgactgttgcagaatcacagcttccagaa
ggctcaaatgtagctttagaagcaacgcaagaaaaaagtgacaatcctgcgacttctatt
gatcctgtagaagaacgaacagttaataaagttgcatctacttgtcagctgaggaggagt
cggacacaaaaaactaaacccaaaccaaaagtgccacagacatcaagagctgtaaggtct
aaacatcaaaccacggaagagccgggagagaaaggttcatgtcctggttcaaatcctgat
gtccctgaaaagaaaattgcagagttggaacaaaaatcaacgtctacctttgataaacaa
acagaaagctatgattctgcttcatgtttaaagccaccactcacttctggttcctctgga
acacccttacaagaagatcagacaaatattggacaagatcagataaatatggagacagca
tcagatcagagtgttgtaagaaaaccaaacttctcagaccttcaacctgaagaagttgca
aaggaaaccaccagtgatacaggatttaattctgaattcacaggtaaaaacctttcattc
cttgttgaaacaagtgagagcagctgtaataacacagttgattcagtgggagtagaagtt
cacccacatttacagttggattcagccccagttcaagaacaaagtggtctttttatcaaa
cctgcacaagattgtaaagttgcatctgcttgtccatcgaagagtcgtcaattaccaaaa
atgaatccaaaaccaaatgtgccacaaacgtctccaaagtttaaacccttagaagagcca
acaaaaaaggactcgacttctagcccaaatgttgagtctcagaaaaagataatgacaaaa
gtgcagcgagaaccaacatgcaagtcccaacgtgaaaaacagacccaagatcagtcaaag
gtccattttgagctgggtgtggagcaggtcgccagagatgtgaagtcttctgagttcaaa
gatgcaaacttgacgtcccacgttggaacaagtcacaagtgtcataatgtggcattaact
agtcagtcaatcacacaaacacaagatggtcaagagtcaaatccaacgtctgttagaagt
ggaccgcctgcagcttcacaagaattcctcattcaggagaaagaagttgcgtctgcttgt
cagttaaagaggattcgatcacaaaaaattaaaccaagaccaaatctgccacagatttca
agaactgcgaggttaaaacctcgagtttcaaaaaaagctttagaccaagattcaagctgc
actccaccgcctgataaaacaaccaacgcagaggtggaaactcagccgtgtttacctgaa
aaacaaagtgaagacacagatgttggatctgatggtgggctggatttgggaacttcagtt
gagagtacgtctggaaaccaaaacctttttgaagttcaacctgagcagagtttggagcag
gacgcctcagagatgaattcttctaagttcaaaggtacaaatctgacgtcttatgttgga
acaagcaagatttgttcatatactgaagaaacggctgacttgaggtgcagagattcacaa
gttggaaaaagggcaactctagattcaacttcactccaagaccagagtggccatcttcct
gctttagttacatctgtggagaggttggcagtcggtaaacaagagggtgaacctgactta
tcacaagaccatgtcacagccatgcaacatctggacaaaactcaaattctcatcttgagc
tctaaattttcagacaaaacaaaagaagaagaagcagaacctacttgttctacgtggctt
ccagataacttaaaccaaaacaaacgtactgactcttctccagtttcctcacagctactg
gaatcagctcctagatgcaccgaggagtcgtcttcatgtaaagaacaactgatgccaaac
attgggcaagttgcagcttcagaggacgcagaacaaattattcctcaaaggaggcagcgg
tttccaaaggtcaagcccaagcccaatttaggatcagttaaaatcacccgcagaaatctt
caatcagttgacggcagtaagcatttagaaaaacaactcgtggactcttactcaattgtg
acatcagagcaacaacccaaggaatcgactaagaacaaaatgtcaaaagatgatggcttg
gagactgatttagcttcctctgagcatggcaaggtgaaaatgtcagacacccagccggta
attgatcagactggaattacagatgtccagtctacaagaaaagaaactacttctatatcc
cacaagaccgactcatctgatcaaagctctgatcagatgccatcagaaatgactgcaagt
aaagctcctgcagctcggagaggacggcttattaaacccaaacctaacctgcaacgcagc
agccgtcctcaacaaccccagcaagtacaaagcacaaagccaacagaagcagactccagt
agttgctcaagaggagtcggtgcatctgttgatcacacatctgtatgtgatctcagacct
gatcatcaggggccaagtaaaggaactgttgagaaactagatcaaaaagactccagttca
aatgatgctcgttcttctcttggttttgtgacacaatctaccacacaggatgaatcaaca
tcaagtgctgaggggatttttagtcatccactcatatcagaattcctgccagccgaagtg
ccttcagatccagatgaaccattcttcatcctctctctgactgcgatcccagtctcatcg
gttgtggagggggtgaacagtgcatctgaacacctgccaggtctcactgtaacagattca
ttagtacatcaaccaagcacatctctggaagcagcaggagatgcgtttgtttccacaaag
gagagaagtgtgggaatctgtgtagacattggccaagaaccagctatatcccaacaaggt
agcgtggtagttgcctgtgtgtttgtcacgttaactaaatga
DBGET
integrated database retrieval system
