Nematolebias whitei (Rio pearlfish): 119425174
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Entry
119425174 CDS
T08042
Symbol
pou5f3
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119425174 (pou5f3)
03021 Transcription machinery [BR:
nwh03021
]
119425174 (pou5f3)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119425174 (pou5f3)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
119425174 (pou5f3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119425174
NCBI-ProteinID:
XP_037548638
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All DBs
Position
18:31739109..31741866
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AA seq
481 aa
AA seq
DB search
MSDRPQSPECQTRPYDYSRHNAYSQVCGHEGLGNPSSSFQFPHGVLPDPSLLYSKPAYGG
ITAASAQAFMQFPPATGNYRDSDMQTGDFGQRKHWYPFAAHEYTGHVPGVTAATQPTNLS
PPIAETREQIKLPEIKTEMDTGEEYSTEMKVQQYPIPPASTGTHRHHHHHGVFCSAAWNP
SFWPGIPHINLPGTSTQNPTGLSASPPSMSPSPPINGAPRNAFFSVNSAQAAAEPQAQNP
ASNTRSSGSSSGGCSDSEEENLSTEELEQFAKELKHKRITLGFTQADVGLALGKLYGKMF
SQTTICRFEALQLSFKNMCKLKPLLQRWLVEAETSENPQDMYKVERVFVDTRKRKRRTSL
EGAVRAALESFFINCPKPNTQKIIQIANELGLERDVVRVWFCNRRQKGKRLALPMDEECD
GQYYEQSPSPLNMAASPVPSQGYPSSSYTGAPPPMLYMPPLHRPDVLKQAMHSGLVSHLT
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataggccccaaagtcctgagtgccagaccagaccctatgactacagccgacac
aacgcatacagtcaggtttgtggtcatgaaggtttgggcaacccttcatcatcgttccag
tttcctcatggcgttttgccggaccccagcctgctttacagcaaacctgcttatggaggc
atcacggccgcatccgcgcaggcctttatgcagttcccacccgccaccgggaactacagg
gactctgacatgcagactggagacttcggacaacggaaacattggtatcccttcgctgcg
cacgagtacaccggccatgtacccggcgtgaccgcagccactcagcccacaaatctgagc
ccccccatagctgagacccgggagcaaataaagctgcccgagatcaagaccgagatggac
accggagaggagtattcaaccgagatgaaggtccaacagtacccgataccgccggcttcc
acgggcacccaccgccaccaccaccaccatggcgtcttctgctctgcggcctggaacccg
tccttctggcccgggatcccccacatcaatctgcctggtacaagtactcaaaacccaacg
ggactgtccgcatcgccaccatctatgtccccttctccccccatcaacggggctccgcgg
aacgcgtttttcagcgtgaactccgcgcaggctgcggccgagccgcaggctcagaacccg
gcctccaacacgcggagcagcggctcctccagcgggggctgcagcgactctgaggaggag
aacctttccactgaagaactggagcagtttgccaaggagctgaaacacaaacggataact
ctgggtttcactcaggcagatgttggccttgcactgggtaaactgtatggtaagatgttc
agccagaccaccatttgccgttttgaagctctgcagctaagctttaagaacatgtgcaag
ctgaagccccttcttcagagatggctggtggaggcagagacctcagaaaatcctcaagat
atgtacaaggtagagcgagtatttgtcgacaccagaaaaaggaaaaggaggaccagcctg
gagggagcggtgcgcgccgccctggagtccttcttcatcaactgtcccaaaccgaacact
cagaaaatcatacaaattgcgaatgagttgggcttggaaagagatgtggtgcgcgtttgg
ttctgcaatcggaggcagaaggggaagcgcttggctctgccgatggacgaggagtgtgac
ggtcagtattacgagcagagcccttcaccgctaaacatggcggcctcccctgttcccagt
caaggctacccatcctccagctacacaggagcgcctcctcccatgctctacatgccgccg
cttcacaggccggatgtcctgaaacaagccatgcactctggactggtcagccacctgacg
ggataa
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