Nematolebias whitei (Rio pearlfish): 119425242
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Entry
119425242 CDS
T08042
Symbol
rnf139
Name
(RefSeq) E3 ubiquitin-protein ligase RNF139
KO
K15703
E3 ubiquitin-protein ligase RNF139 [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119425242 (rnf139)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119425242 (rnf139)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119425242 (rnf139)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
119425242
NCBI-ProteinID:
XP_037548693
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All DBs
Position
19:complement(35674573..35681736)
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AA seq
698 aa
AA seq
DB search
MASTQARIGQQALALLDVALRVPCIFIIDAIFNSYYDPGSGWAGATGKVLVRITGVLIST
VVLLLSQKALLKFYTLFFAVLLGMAAALINYYATSHIDFYGAYYKAALGFRLLPRNGTTL
WLGMAAVQLIFGIGYVFLFNLQSVFAALVVLDIMIPLWGMMIELPAEVRHMLAVFSCLVL
LINTAVCLAIRLKWFYYSCRYVYLLVRHMYRIYGLQLLLEDTWKRIRFPDVLRVFWLTRV
TAQALILFYVVRAVRKESGDATGGATDGSSDAQGYLFSWDVFWDLTSNLIISGCDSTLTV
LGMSAVISSVAHYLGLSILAFIGSTEEEDKRLGFVAPVLFFILALQTGLSSLDPEERLVR
LSRNMCLLLTAILHFIHGMTDPVLMSLSASHVSSFRRHFPVLLVSVALFVLPVALSYALW
HHYALNTWLFAVTAFCVELCLKVVVSMTVYGLFMADGFSNVLWEKLDDYVYYVRSTGNII
EFLFGVIMFGNGAYTMMFESGSKIRACMMCLHAYFNIYLQAKNGWKTFINRRTAVKKINS
LPEVRGDQLRDIEDVCAICYQDFATSARLTPCHHYFHALCLRKWLYIQDTCPMCHQRVYV
EDEGQDRAAFSNNNGGYAAPQAAAGQLAPGENQLGQPVAELLANGAAGAHAAEGAAGLDE
LPGDNDSIEYDEDEWGTPNGSMPIEEDYINDDTDSTED
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccactcaagcccgcataggccagcaggccttagcgctgctggatgtggcgctt
cgagttccctgtattttcattatcgacgctatttttaactcctactacgaccctgggtcg
ggatgggccggagcaacgggaaaggtgttggtcagaattacgggtgtccttatctccact
gtggtgctgctgctctcccagaaagccttgttaaagttctacaccctcttctttgctgtg
ctccttggcatggcggctgccctcataaactactatgccacctcacacatagacttctac
ggcgcttattacaaagcagcgctggggtttagattgctgcccagaaacgggacgacgttg
tggcttggcatggccgcagtccagctcatctttggcatcggctatgtgttcctgttcaac
cttcagtcggtgtttgccgcgctggtcgtcttggacatcatgatccctctgtgggggatg
atgatagagcttcctgcagaagtcagacacatgttggctgtattctcatgcctggtgctt
ttgatcaacacggccgtttgcttagccatcagactcaaatggttctactattcatgccgg
tacgtctacctgcttgtgcggcacatgtacaggatctatggacttcagctgctgctagaa
gatacgtggaagagaatcaggtttcctgatgtgctgcgagtgttttggttgactagggta
actgcccaggcgctcatactgttttatgttgtgcgggcggtgagaaaggaaagtggagat
gccacaggaggggcaacagatgggagctcagacgcacagggttacctgtttagctgggac
gtgttctgggatctgacaagtaacctgatcatctctggttgtgactccactctgactgtg
ttggggatgagcgccgtcatctcctctgtagcacactacctcggtctcagcattctggct
ttcataggttcaacagaagaggaggacaagcggttaggcttcgtagctcctgttctgttt
ttcattctggctctgcagaccggattaagcagcctagacccagaggagcgcttggtccgc
ctgagccgaaacatgtgtcttctgctgacggccatcctgcactttattcacggcatgact
gatcccgtcctgatgtccctcagtgcttcccacgtctcttcctttcgacgccacttcccc
gtcctgctggtgtccgtggcgctctttgtgctccctgtggcgctcagctacgccctctgg
catcactacgccctcaacacctggctctttgctgttacagctttctgtgtggagctctgc
ctcaaggtggtggtgtccatgacggtctacggcctcttcatggctgacggcttctccaac
gtcctgtgggagaagctggacgactacgtctactacgttcgctccacgggcaacatcatc
gagttcctgtttggcgtcatcatgtttggaaacggcgcctacacgatgatgtttgagtct
ggcagtaagatccgcgcctgcatgatgtgcctgcacgcttacttcaacatctacctgcag
gccaagaacggctggaagaccttcatcaaccgccgcacggctgtcaagaagatcaactcc
ttgcccgaggtccgcggagaccagctgagggacatcgaggacgtgtgcgccatctgttac
caggactttgccacgtctgcccgcctcacgccgtgccaccattacttccatgcgctgtgc
ttgaggaagtggctctacatccaggatacgtgccccatgtgccaccagagagtttatgtc
gaggacgagggccaagacagagccgccttctctaacaacaatggcggctacgcagcgccg
caggccgccgccggccaactcgcaccaggcgaaaaccagctcgggcagccggtcgccgag
ttgctggccaacggagcggctggtgcgcacgccgcagaaggagcggcggggctcgatgag
ctgccaggggacaacgacagcatagagtacgacgaagacgagtgggggactccgaacggc
agcatgccaatcgaagaagactatattaacgacgacacagactccactgaggactga
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