Nematolebias whitei (Rio pearlfish): 119425504
Help
Entry
119425504 CDS
T08042
Name
(RefSeq) uncharacterized protein LOC119425504
KO
K18808
toll-like receptor 13
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nwh04054
]
119425504
Pattern recognition receptors [BR:
nwh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
119425504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_14
LRR_9
ThsB_TIR
LRR_EndoS
LRRNT
LRR_LRWD1
LRR_13
Suppressor_P21
Motif
Other DBs
NCBI-GeneID:
119425504
NCBI-ProteinID:
XP_037548960
LinkDB
All DBs
Position
19:complement(33241300..33261465)
Genome browser
AA seq
1893 aa
AA seq
DB search
MANTGILSSHFILRLLCLLLHMNSFRAYSLKNCTKTYQENLSAHVVLDCSNRNLENIPDD
PPKEAVSLKLNRNLLQKINKKDFCGMSKLRIVNLEDNKIVFVDDGSFTDLSLLETLVISN
NKLTNLTSNMFQGLSNLTVLDLSYNKIYFINNSAFQFLSNLQSLDLSENMLQQITKIQPI
LQLPQIQRLALTSNQFSSFETKDLPLNLSSSLKELSIYNFEVKNFSITTPIFPYLTKLDL
SGYGLQAHIKWDIPDKTFLRNITQLYFRQQLLSLEEMQKVLQSFSSLRHLRFGLSDELMT
ERLFLTVCKIPSLRRLDLFDNNLDNLTRQLSRCSQLTELDLSSTGITELQKGCISSMTHL
WSLNMSFNLLVNVPYDVRRLPSLKILNLNSNRIFELTCEAFLNATHLTELSLSDNRIAKL
DKCVLEHLTDLKLLDLSKNLLKKYGNIFSVALQKLEVLDLAYTGNSFLKFCDFQTLESLK
QMKAGMYFFGRGKDKKNHGWNNANNKSNYNGLQSLENLTIILNVESTFKNFHSNYGKFIF
LLKSLKILTVVCNVDHSGIPFDVPIDMLRTMEHLEYFTAINVYAYPLDVKTFQFNPRLKS
LTLAKTDLSKQNPELFLSIPNLQILDLSRSELKSLNFLVHANLTALRYLKLTNNEINVIN
EVVFSFLPSLTYLDLSFNQFTCECSNAGFIQWIKDNKQTQVVNAHQYKCSFPVDKQGTLL
LDFDVQSCWNDGNFFYFVSSSCLVVLALLTSFIYHFLRWQLAYTFHLFMAFLYDSKMRKK
GDPHQFDAFVSYNVHDEDWVYREMLPVLEGEQGWRLCLHHRDFQPGKPIMENITDAIYGS
RKTICVISRHYLQSEWCSREIQMASFRLFDEQKDVLILLFLEEIPPHYLSPYYRMRKLVK
KRTYLSWPQAAQHPGVFWQNVQRALQTGDALTEDTDLLTGPTGHMAAVGSSSSRFVLKLL
FLLIHFVPSLTFSLKDCNIDYQENPSSDVSLNCQERKLTAVPEEIPQNAVSIQLSHNLLE
EINKEDFCGFLNLRILNLGSNQIVSVEDESFFSLVSLKTLSMSFNQLTKLTSGVFKGLSN
LTVLNLNSNSIQFLHNSAFQFLISLQTLDLGCNLLQQISDLQPILQLPQIQTLNLESNNF
SSFETKDLLLNISNLKELQLPSDTLKVFSITTPVFPYLEMITFDTCGFCSNLEWDIPDKT
LLRSITQLCIAGSVLSFEGAQRVLQSLDSLTHLTLYPLDNWLKNGIFSTICKIPTLRKLD
LSGNILYNLTFKLAPCSQLTEIDLSNSWVTEMPKGSIQSMKQLRSLNVSENRLVEVPVDI
RSLSSLEILNMNNNRISELNCEDFRGAIHLRELSLNSNRIIHIDKCVAEHLTDLRLLDLG
NNHITDYDDCFEIALQNLEILDLSYNVIFYHEAEEFQALESLKYLTVGTYFIMQAKQNDH
GSNGLDVFLSHEHDYEAAFRGLQHLESLTVYLYADNVFKIPHATNDENYFHFQSLKTFTV
ICRGDRQGASFDIPQQMLNAMENLEVLKAVNIYNEAPHRETFDYNPHITNLTLTKSNLKD
MDPRIFVTIPKLQSLDLSETNLISLDFPLQANLTALRYLKVTDNEINVINESVFQFLPSL
TYLDLDNNPFTCECSNSGFIQWIKENKQIQVVNAHQYKCSFPVDKRGTLLLDFHVQSCWN
DGSFFYFISSSCLVVLTLLTSFVYHFLKWQLAYTFHLFLAFLYDSRRKKGDPHQFDAFVS
YNVHNEDWVYREMLPVLEGEQGWRLCLHHRDFQPGKPIMENITDAIYGSRKTICVISRHY
LQSEWCSREIQMASFRLFDEQKDVLILLFLEEIPPHHLSPYYRLRKLVKKRTYLSWPQAA
QHPGVFWQNVQRALQTGDALTEDTDLLTGPTVF
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggctaacacaggaattttgtcttcacacttcattctgagacttctttgtctactgctt
catatgaactccttcagggcttactcactaaaaaactgcactaaaacttatcaggagaat
ctgtcggctcatgttgttttggactgttcaaacagaaaccttgagaatatcccggacgac
ccccctaaagaagctgtttcattaaaactcaacaggaatctccttcagaaaattaacaaa
aaggatttttgtggcatgtcaaaactgagaattgtgaatctagaagataataaaatagtt
tttgtggatgatgggtctttcactgatctgagtttgctggaaacacttgtcattagcaac
aacaaactgactaacctgacaagcaacatgtttcagggtctgtccaacctcactgtgctt
gacctctcttacaacaagatttacttcattaataactcagccttccagtttctgagcaac
ttacaatctttggatttaagtgaaaatatgctccagcaaatcaccaagattcagcccatc
ctacagctaccacaaatacagaggcttgctctcacttctaatcagttttcttcttttgaa
actaaagacttgccactaaatctgtcctcaagtctaaaagagttgagtatttataatttt
gaagtgaaaaatttcagcatcacaacaccaatctttccttacctcacaaaattggatctt
tcaggatatggacttcaagctcacataaaatgggacattcctgataaaacctttctgagg
aacataacacagctttactttaggcagcaattgctgtcacttgaagagatgcaaaaagtc
ttgcagagtttcagctcgctgagacatctgagatttggactgtcggatgagttgatgaca
gaaagactgtttttgacagtctgcaaaattccatcattaaggagactggatttgtttgac
aacaatcttgacaatctgactcgtcaactttcacgttgctctcagctcacagagcttgat
ctatcttcaaccggaataactgaactgcaaaaaggttgcatatcatcaatgacacatctc
tggtccctgaatatgagtttcaacctgctcgtcaacgttccatatgatgtaagacgcctc
ccctccctcaagatcttgaatctgaattcgaatcgaatttttgagttgacctgtgaggct
tttttaaatgcaacacatctcacagagctttccctgagcgataaccgcattgctaaactg
gataagtgtgttcttgaacatcttactgatctaaaactcttagatctgagtaaaaatctg
ctaaagaaatatggaaacatcttcagtgttgccctccagaaactcgaggttttagatttg
gcctacactggtaactcattcctgaaattctgtgactttcaaactttagaatccttgaaa
caaatgaaagctggaatgtactttttcggaaggggaaaagataaaaaaaatcatgggtgg
aataatgccaacaataaatcaaactacaatggtttgcagagcttggaaaatcttacaata
atacttaatgttgaaagcactttcaaaaattttcattcaaactatggtaagtttattttc
ctcttaaaatctttgaaaatactcacagtggtttgcaatgtagatcattctggcattcca
tttgatgttccaatagatatgctccgaactatggaacatttggagtattttacagctata
aatgtgtatgcttaccctctagatgtgaaaacatttcagttcaacccacgtcttaagagt
ctgacattagctaaaacggacttgtcaaaacaaaatcctgaactatttttatcaatccca
aacctgcagattcttgatctctcaaggtctgagctcaagtctttgaatttcctggtgcat
gccaatcttactgctctcagatatctgaaactgactaataatgagatcaatgtgattaat
gaggtagtcttcagcttcctgccctctctaacatacctggacctgagcttcaaccagttc
acctgtgaatgctcaaatgcaggtttcatccagtggataaaggacaacaagcaaacacag
gtggtaaatgctcatcagtataaatgttcctttcctgtggacaaacaaggaaccttgtta
ctagactttgatgtccagtcctgttggaacgacggcaacttcttttacttcgtctccagc
tcatgtctggttgttctggctctcctcacctctttcatctaccacttcctgaggtggcag
ctagcatacacattccacctcttcatggcctttctctacgacagcaagatgaggaagaag
ggagatcctcatcagtttgatgcctttgtgtcctacaacgtccatgatgaggactgggtt
tacagagagatgcttccagttctggagggagagcagggctggagactctgtctgcaccac
agagacttccaaccaggtaaacccatcatggagaacatcactgatgccatttatggcagc
agaaagaccatctgcgtgatcagccgccattacctgcagagtgaatggtgctccagagag
atccagatggccagctttcgcctgtttgatgaacagaaggatgtgttgatcctgctgttt
ctggaggagatccctcctcattatctgtctccatactaccgcatgaggaagctggtaaag
aaacgcacctacctgagctggcctcaggctgcacaacacccaggagtcttctggcagaat
gtccagagagctctgcagacaggagacgctctgactgaggacacagacctgctgaccgga
ccaacaggacacatggctgccgttggaagttcgtcgtctcgcttcgttttgaaacttctc
tttctcctgattcattttgtcccctcactgaccttttcactaaaggattgcaacatagat
tatcaggaaaatccatcttctgatgtttctttaaactgccaagaaagaaaacttacagct
gtcccggaggagatcccccaaaatgccgtttcaatacagctcagccataatctacttgag
gaaattaacaaagaggatttttgtggctttttaaatctgagaattctgaacttaggatca
aatcaaattgtttctgtagaggacgaatctttcttcagtttggtatcactgaaaacgcta
agcatgagctttaaccaactgaccaaactgacaagcggcgtgtttaagggcctgtctaac
ctcacggtgctcaacctcaattccaacagcattcagttccttcataactcagccttccag
ttcctgatcagcttgcaaaccctggatttaggttgcaatttgctccaacagatcagtgac
cttcagccgatcttacagctaccacagatacaaacgcttaacctcgaatccaataacttt
tcttcctttgaaaccaaagatctgctgctgaatatctcaaatcttaaagagttgcaactt
cctagtgataccctgaaagttttcagcatcacaactccagtctttccttacttagaaatg
ataaccttcgatacgtgtggattttgctctaaccttgaatgggacatacccgacaaaacc
ctactgaggagcataacgcagttgtgtattgccgggtctgttctttcctttgaaggggcc
caaagagtcctgcagagtctcgactcactgacgcatctcacgttatatccattggacaac
tggttgaagaatggaatcttctctacgatctgcaaaataccaactttgcggaagctggat
ttgtccggcaacatcctttacaatttgacttttaaacttgcaccttgttctcagctcaca
gagatagacctgtccaacagctgggttactgaaatgccgaaaggctccatacagtcaatg
aagcagctgcggtccctgaatgtgagtgaaaaccgactcgttgaggtgccagttgacatc
aggagcctcagctctcttgaaatcttaaatatgaataacaatcgtatctctgagttgaac
tgtgaggacttcaggggcgcgatacatctgagagagctttctctgaacagtaatcgaatc
attcacattgataagtgtgttgctgagcatcttactgatctaaggctgctagatctaggt
aacaatcatattacagattatgacgactgctttgaaattgccctgcaaaaccttgaaatc
ttggacttgagctacaacgtgatattttatcatgaagcagaggagttccaagcgttagag
tctctgaaatatttgaccgtgggaacatattttattatgcaagcaaagcaaaacgatcac
ggatcaaacggtctagatgtttttctgtctcatgagcatgactatgaagctgctttcaga
ggtttgcagcacttggaaagtctcacggtatacttgtacgctgacaatgttttcaaaatt
cctcatgcaacaaatgatgaaaattatttccacttccaatccttgaaaaccttcacagtg
atctgcagaggtgatcgccaaggcgcaagctttgacatcccgcagcaaatgctcaacgct
atggaaaatttggaagttttaaaagcagtgaatatctacaatgaggccccacacagagag
acatttgattacaacccacatatcacaaatctgacattaacaaagtccaatttaaaagat
atggacccaagaatatttgtaactatcccaaagctgcagagtctggatctttcagagact
aatctcatatctttggattttccacttcaggccaatcttactgctctcagatatctgaaa
gtgactgacaatgagatcaatgtgattaatgagagtgtgttccagtttctcccctctcta
acatacttggacctggacaataacccgttcacctgtgaatgctcaaactcaggtttcatc
cagtggatcaaagaaaacaagcaaatacaggtggttaatgctcatcagtataaatgttcc
tttcctgtggacaaacgaggaaccttgttactagactttcatgtccagtcctgttggaac
gatggcagcttcttttacttcatctccagctcttgtctggttgttctgactctcctcact
tccttcgtctaccacttcctgaagtggcagctagcctacacattccacctcttcctggcc
tttctctacgacagcaggcggaagaagggcgatcctcatcagtttgatgcctttgtgtcc
tacaacgtccacaatgaggactgggtttacagagagatgcttccagttctggagggagag
caaggctggagactctgtctgcaccacagagacttccaaccaggtaaacccatcatggag
aacatcactgatgccatttatggcagcaggaagaccatctgtgtgatcagccgccactac
ctgcagagtgaatggtgctccagagagatccagatggccagctttcgtctgtttgatgaa
cagaaggatgtgttgatcctgctgtttctggaggagatccctcctcatcatctgtctcca
tactaccgcctgaggaagctggtaaagaaacgcacctacctgagctggcctcaggctgca
caacacccaggagtcttctggcagaacgtccagagagctctgcagacaggagacgctctg
actgaggacacagacctgctgaccggaccaacagtattctga
DBGET
integrated database retrieval system