Nematolebias whitei (Rio pearlfish): 119425520
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Entry
119425520 CDS
T08042
Symbol
grin2da
Name
(RefSeq) uncharacterized protein grin2da
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04020
Calcium signaling pathway
nwh04080
Neuroactive ligand-receptor interaction
nwh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119425520 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119425520 (grin2da)
04082 Neuroactive ligand signaling
119425520 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119425520 (grin2da)
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Glutamate (ionotropic)
119425520 (grin2da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
119425520
NCBI-ProteinID:
XP_037548977
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All DBs
Position
19:36195284..36311913
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AA seq
1770 aa
AA seq
DB search
MVEGMTDGSFIGWEKKSVVVLNVTDDPGGARTKRLLKDNEAQSRVSPVGTVTAGDRHQLP
LHSERKKQVGWWENGRLRLRYHPWSRYGFFLKPLDDSQHLRVVTLEERPFVIVEPADPGT
GSCIRDSVPCRMPPNSSLVVDGAGLTKHCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHG
KNINGEWNGMVGEVVSNRADMAIGSLTINEERSAVVEFSVPFVETGISVMVSRSNGTVSP
SAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSAKMSGGSKFTIGKSVW
LLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLS
DKKFQHPTEQYPPLRFGTVPNGSTEENIRSNYPNMHQYMIRNNQKGVEEAIDNLKTGKLD
AFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDD
EIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLR
HCVKRSGGMDFLLALSRGMYSCCQFEDETTPGGTKSSLPQYHTVTSMPSVQQQHLVTATV
NNTTAIAMVQQQQPKHHQQQQGQTYTSMLPGSPPATGHSAMALGPSNSPLLEGPMPCSTF
LPHHDRRLAVVDRWNRPKPEKVMSGSSSGGVGIGGIAGGITDLQTQQQFHHSLGMHWSLQ
GGVTGGVGGSGDTGLDEYKRYYGPIDPEGLGANLDQQAGGPQQTPKATSRGFKAPGIPRL
PPKGPHQGQVHLISKPPPPIPSSPRRPPFWRRASLAQARRKSSGGPLYENILPLGRRGGG
RYGVSDGAGRRGRRPPPPPPLPVPLSSPTRTPTTPSSPCRFYSSCSSASSASSSSSSSSS
SSSSGSLSRSNSPSSCSSDSSYNSSLSFCYRAGDRDFMIDDVYDSDLLTEESSLLLGSRK
KIRSRRMSSRSLPCSPPPPPIPPRKPHPQKSYGRERTSSQLAQLQEWWASWGDRECGRGG
TTNKVNAALGREEKRQHKERERERKRRKKGRKKKKREERERERERKRRKTKKKRKKDDKI
RKSERKRSELESGDPEKREEGKSEMPEFPPYPPSRRESFRKKSESSIRSYGWNIPGEDER
KERDENKRDDGEESREKDRHHRRRNSKHHHSSGGKPSTSVKFWGGGNPSDNIPSAFLPLL
PVSSKRRKSKSSDRDAVCMEGEKRPLLGRNERSEMHCKEGLSFHEWESEVEGGEDDSEPE
RRKSEHGKRHRGGRTMSDDERERDKVVGIYSDDDGSSGEFGKFERYWEDHEGRAVGGIGG
GGWFFSTYPSRDKAGTINSRDDLFLERGERWATTETDWGSSAIGGERGWGSGSHWPPPPL
TPPPPRRYWSVDKLHIQDEKRSKRKPKDKGRGQTSCSSCQSSRQHPHSAKWARVTSRSQE
ELYPHCQNFGGPLKPKHDSSLSSKPDRSRNLSKSGSQSNLSIQQRTQRTDRDRDRGRQPS
PPSSLIPNLPSPLPALPAPPSSSHSIHAPPPTSSSSVSSPSVVSSTPGAPQASSMASASA
KLQYQRLRSVPQPQRFPQSPHLPLKAKSLCSRRGSAHFSSSARVVQRSLDLVRERLTTGE
KCLLQLWSTGNRLPDPVDPFPDIYLDPDFAKDSGPLLCNTDPKMHLCRTGPKALYKNYVK
ILNKRTQHNRVVSEWDDKLGGQKPQDRLQAGPQLDAVALWRCNVKAKLALEFCFHRDTGH
LENSVKLWRFKKILCNIFDQGELGYNKLLV
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggtggagggcatgacggatggctcgttcattggctgggagaagaagagcgtcgtggtt
cttaacgtgactgacgaccctggtggggcacgaaccaaacggctgctcaaagacaacgaa
gctcagtccagggtgtcccctgtgggcacagtgacggctggagataggcaccagctcccc
ctccactctgaaaggaagaagcaggttggttggtgggaaaatggccgtctacgcctccgt
taccatccgtggtcgcgttacggctttttcctgaagcccctggatgattcccaacatctc
cgagtggtcaccctggaggaaaggccctttgttattgtggagcctgctgatccagggacc
ggctcgtgcatccgggactcggtaccctgccgcatgccccctaactccagtttggtggtg
gatggtgccgggctgacgaagcactgctgcaaggggttctgcatcgatgttctgaagcgt
ctggccaagattgtgggtttcacctatgacctgtacttagtgactaatggaagacatggg
aagaacatcaatggggaatggaacggcatggttggagaggtcgtatccaacagggctgac
atggccattggttctctcaccattaacgaggagaggtcagcggtcgtggagttctcggtt
ccctttgtagagaccggcatcagtgtgatggtttcccgcagtaacggcacagtctcacct
tctgctttccttgagccctacagcccagcggtgtgggtgatgatgtttgtgatgtgcctg
tcagtggtggctgtcaccgttttcatctttgagttcttcagccccgtgggatacaaccgc
agtctgcagagcgccaagatgtcaggcggctctaagttcaccattgggaagtccgtttgg
ctgctgtgggcgctggtttttaataattcagtccctgtggaaaatcccagaggaaccacc
agcaagatcatggtgctggtttgggccttctttgctgtcatcttcttggcctcctacact
gccaacctggctgccttcatgatccaggaagagtacatcgacacagtgtcaggactgtcg
gataagaagtttcagcatccgacggagcagtacccaccgctgcgctttggtacggtgccg
aacggcagcaccgaagagaacatccgctccaactatcccaacatgcaccagtacatgatt
cgcaacaaccagaagggcgtggaggaggccatcgacaaccttaagactggaaaactagat
gccttcatttatgacgctgcggtgctgaactatatggccaggaaggatgagggctgcaag
gtgatgacaattggctccgggaaagtgtttgccactacaggatacggcatcgctctgcac
aagaactcccgctggaaacgaccgctggacctggctctgctgcagttagttggagatgat
gaaattgatatgttggagcgcctttggttgtctggaatctgccacaatgataaaattgag
gtgatgagtagcaagttggacattgacaacatggcaggtgttttctacatgctgctggtg
gccatgggcctcagtcttctcgtttttgcctgggagcacctggtgtactggaaactgaga
cactgtgtgaagaggtctggtgggatggacttcctcctggctctcagcaggggaatgtat
agttgctgtcagtttgaggatgagacaacaccaggagggaccaaaagttctttgccccag
taccacactgtgacttccatgccgtctgtacaacaacaacaccttgttacagccacagtg
aacaacacaactgccattgccatggtgcagcagcaacaacctaagcaccatcaacagcaa
caagggcagacctacacctctatgctacctggatcaccaccagctacaggacattcagca
atggctctgggtccctccaacagcccattattggaaggtcccatgccctgttctaccttt
ttgcctcatcatgaccgcagactggctgtggttgatcgctggaacaggccaaaaccagaa
aaggtcatgagcggaagtagcagtggaggagtaggtattggggggattgctggagggatc
actgatctacagacccagcagcagtttcatcacagtcttggaatgcactggagtttacaa
ggaggagtgacaggaggagtaggaggtagtggcgacacagggctagatgaatataagcgc
tattatggtcctatagatccagaggggctgggggctaatttggaccaacaagctggaggc
cctcagcagactcccaaagccacttctagaggctttaaagctccagggataccaaggctg
cctcctaaaggtcctcatcaaggacaagtccacttaatctcgaaacctcctccaccaatc
ccatcttctccacgaagacctccattctggcgacgagcaagccttgctcaggcaagaaga
aaaagctcaggaggtcctctgtatgagaatatacttcctctaggaaggcgaggaggtggg
aggtatggagtaagtgatggcgctggaagaagaggacgtcgcccgcctccacctcctcct
ctaccagtccctctttcttctccaacacgtacccctaccactccttcttccccatgtcgt
ttctactcatcctgctccagtgcctcgtctgcttcctcttcctcctcctcatcctcttcc
tcttcatcctctgggtcactttctcgatcaaattctccatcctcttgctccagtgacagc
tcttataactcttcactgagtttctgttatcgtgcaggtgatagagattttatgatagat
gatgtatatgactcagaccttctcacagaggagtctagcctccttcttgggtcacggaag
aagattcgctcacgacgcatgtcttctcgctcactaccatgcagccctccacctccgcca
ataccaccacgaaaaccacatccacagaaaagttatggtagagagaggaccagcagtcaa
ctggcccaattgcaggagtggtgggcatcatggggtgacagagagtgtgggaggggagga
acaacaaataaagtaaatgcagccttgggaagagaggagaaaagacaacacaaagaaagg
gagcgtgagagaaagaggaggaagaaaggtcgaaagaaaaagaagagagaggagcgggag
agagaaagggaacggaagcgtcgtaaaacaaagaagaagaggaaaaaagatgataagata
aggaagagtgaacgaaaaagatcagagttggaaagtggagatcctgagaaaagagaggaa
ggcaaatcggaaatgccagagttcccaccttatccaccttcaaggcgagagtcgtttcgg
aaaaagagtgaaagctcaatccgaagctatggatggaacataccaggtgaagatgaaaga
aaagaaagagatgagaataaaagagatgatggtgaagagagcagagaaaaggatagacac
cacaggcgaagaaacagcaagcaccatcatagctctggtggaaagccttctacatctgtc
aagttctggggtggaggcaatccttctgataacattccatctgcctttttgcccttgtta
cctgtttcttctaaaagaagaaaaagtaagagttcagacagagatgctgtatgcatggaa
ggagagaagaggccattgttgggacgaaatgaacgtagtgagatgcactgcaaagaaggg
ctgtccttccatgagtgggagtctgaagtagagggtggagaggatgattctgaaccagag
aggaggaaatcagagcatgggaaaaggcacagaggaggtaggactatgtcagatgacgag
cgagaacgtgacaaggtggttgggatatattctgatgatgatggttcttcaggagaattt
gggaaatttgagaggtactgggaggatcatgaaggtagggccgtgggtggaattggagga
ggaggttggtttttcagtacgtatccctccagggataaagctggaaccatcaacagccga
gacgatctcttcctagaacgaggagaaaggtgggcaacaacagagacagattggggttct
agtgcaattggaggagaaagagggtggggatcaggttcacactggcccccacctcctctt
acaccacctcctcctcgacgatactggtcagtggacaagcttcacatacaagatgagaag
aggagtaaacggaagccaaaggataaaggaaggggtcaaacatcttgttcctcctgtcaa
tcctctcgacaacatccacactcagctaaatgggcccgtgtaacttcccggagccaggaa
gagctgtatccccactgccaaaattttggtggtcccttaaagcccaaacatgactcctca
ttatcatccaaacctgaccgatcacgcaacctttctaaatctggaagccagtccaacctc
agtattcagcaacggacacaaagaacagacagagatcgagatcgaggaagacaaccatcc
ccaccttcttctcttattccaaatttgccatccccacttcctgcccttccagctcctcca
tcttcatctcactctattcatgctcctccccctacttcttcctcttctgtatcttctccc
tctgtggtctcctccacaccgggtgcaccccaagcctcttcaatggcttcggcaagtgcc
aaactgcagtaccagagactgcgctctgtaccccaaccccagaggtttcctcagtctccc
catttacccctcaaagccaagagcctatgctcacgaagggggtcagcccatttctccagt
tctgccagagtggtgcagcgctccctggacctggtgagggagaggttgacaactggagaa
aagtgtctcctgcagctgtggtccactgggaaccgcctgcctgacccagtggaccctttc
ccggacatctacctggatcctgactttgcgaaagatagtggtcctctgctatgcaacaca
gacccaaagatgcacttgtgcagaacgggtccaaaagcactgtataagaattatgttaag
atcctgaacaagagaactcagcacaacagagttgtcagcgaatgggacgacaagctcgga
ggtcagaagccccaggacagactgcaggctggaccccaacttgacgccgtggctctgtgg
aggtgcaacgtcaaggccaaactggcgttggagttttgcttccacagagacaccggacac
ctggagaattctgtgaaactgtggagatttaagaagattttatgcaacatttttgatcag
ggagaactaggatacaacaagctcctcgtgtaa
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