KEGG   Nematolebias whitei (Rio pearlfish): 119425671
Entry
119425671         CDS       T08042                                 
Symbol
rnf5
Name
(RefSeq) E3 ubiquitin-protein ligase RNF5
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119425671 (rnf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nwh04121]
    119425671 (rnf5)
Enzymes [BR:nwh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119425671 (rnf5)
Ubiquitin system [BR:nwh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119425671 (rnf5)
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_2 zf-RING_5 zf-ANAPC11 zf-rbx1 RING_XB3-XBAT31 Prok-RING_4 Baculo_IE-1 zf-C3HC4_4 PTR3_N zf-UDP Rtf2 IBR_1 RING-HC_RBR_RNF216
Other DBs
NCBI-GeneID: 119425671
NCBI-ProteinID: XP_037549141
LinkDB
Position
19:complement(31550966..31557795)
AA seq 210 aa
MAATDPRSSSDGGPASRGGFPAGESSKDRDGPDGGSGGGGESERDRATFECNICLDTATD
AVISMCGHLFCWPCLHQWLETRPSRQQCPVCKAGISREKVIPLYGRGSSSQEDPRLKTPP
RPQGQRTEPESRGGMFPGFGETGFHMSFGIGAFPFGFFTTVFNTNDPFHRPDQYAADQQG
NGNLNNGNNNWQDSLFLFVAIIFFFWLLSV
NT seq 633 nt   +upstreamnt  +downstreamnt
atggccgccacggatccccgctcgtcgagtgacggcgggccggccagcagaggaggcttc
cccgccggagagagcagcaaggaccgggacgggccggacggaggcagcggcggcggcggc
gagagcgaacgggaccgggccacgttcgagtgcaacatttgtctggacactgccacggac
gctgtcatcagcatgtgcggccacttgttctgctggccctgccttcaccaatggttggag
acgcggcccagcaggcagcagtgccccgtgtgtaaagcgggcatcagcagagagaaggtc
atcccgctctacggccgggggagctccagccaggaggaccccaggttgaaaactccacct
cgacctcagggacagagaacggagccggagagcagaggagggatgttcccgggctttgga
gaaaccggcttccacatgtcttttggcatcggagcgttccccttcggctttttcaccacc
gtcttcaacaccaacgacccgttccacagacccgatcagtacgcagctgatcaacaaggc
aacggcaacctcaacaacggcaacaacaactggcaggactccctcttcctcttcgtggcc
atcatcttcttcttctggctgctgagcgtgtga

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