Nematolebias whitei (Rio pearlfish): 119425682
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Entry
119425682 CDS
T08042
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119425682 (trim71)
04121 Ubiquitin system [BR:
nwh04121
]
119425682 (trim71)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119425682 (trim71)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119425682 (trim71)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119425682 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
TEN_NHL
zf-C3HC4
DUF5711
zf-RING_5
Ig_GEX2_N
zf-RING_2
zf-C3HC4_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
119425682
NCBI-ProteinID:
XP_037549154
LinkDB
All DBs
Position
19:complement(8106072..8156198)
Genome browser
AA seq
835 aa
AA seq
DB search
MNSLSKMASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSNHTSKRLHVLPC
LHAFCRQCLESQRNPSEPLKLRCPTCDQKFPITEAGVDSLPSSNFLFSNLLDVVVSSEEQ
IQNKNGHHHLRGSLIGGSSGFHPPHSGLLHPQHIGEPQCSSCDEENPATSHCLDCQEYLC
DNCVRAHQRVRLTKDHFIERLTDSLHLSRVNSNSGQPGVSVSLAQSLQNNFALLSLFQDR
MNFCQHHDNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRTITIQLLADAQQ
GRQAVQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKLEKIRQVKA
KSLYLQVEKLHQSLTKLDGTIAAVSQVLDEGHHLDVLLAKERMLTQIHELKVLRGLLQPQ
EDDRFMFTPPDQALYIAIQAMGMISSGAFAPVTKAHGEGLKNVLRGKPASFTVIGYDHDG
EPRLSGGDAVSAVVMSVADGNLSAVEVTDHQNGSYTVSYLPKTEGEHLVSVLVCNQHIQG
SPFKVVVKSGRSYGSLGSQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIF
KPCGAFHHKFGSLGSRPGQFDRPAGVACDGQRRIIVADKDNHRVQVFTFEGQFLLKFGEK
GTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFSPDGSFLNKYGFEGALWKHFDSPRGV
AFNHEDHLVVTDFNNHRLLVIQPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADS
RNHRIQIFEPNGNFLCKFGTQGSGYGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgctctcaaagatggcttcatttccagactctgacctgcagacgtgtccgctc
tgcaaggagctgtgcggatcctccgctcccatctcctccagctcctccacctcgtcctcc
tcctcgcacacctcctcctcctccaaccacacctccaagaggctccatgtcctgccctgc
ctgcacgccttctgcaggcagtgcctggagagccagcgcaatcccagtgaacccctgaag
ctgaggtgccccacttgtgaccagaagtttcccatcaccgaggctggggtagactccctg
ccgtcctccaacttcctcttcagcaacctgctggacgtggtggtgagctccgaagagcag
atccaaaacaagaacggccaccaccacctccgtggcagcctgatcggaggctcctctggc
ttccacccccctcatagtggccttttgcacccacagcacattggagaacctcagtgcagc
tcctgcgatgaggagaacccagccacatcccattgccttgactgccaggagtacctctgt
gacaactgcgtgagagcgcaccagagggtccggctgactaaagaccacttcatcgagcgc
ctgacagacagcctccacctcagccgggtcaacagcaactcaggccagccaggggtgtct
gtgtccctcgcccagtctctgcaaaacaacttcgcccttttgtctctgttccaagatcga
atgaacttttgccagcaccacgacaacgaggtgttcctgttcttctgtgaaacctgctcg
gtgccaatctgcagggagtgcagcgtcggccgccacatgggccacacttttgtctacctg
caggacgccgtgcaggactgcagaaccatcaccatccagctgctggcagacgcacagcag
ggacggcaggctgtccagttaagcatggagaaggtccaggccatggcggagcaggtggag
atcaaggcaaaggtggtgcagactgaagtgaaggcgcttgttctgaggcacaagaaagca
ctggaggagagagagtgtgaacttctgtggaagctggagaaaatccgccaggtgaaagcc
aaatctttgtacctgcaagtggagaaactccaccagagtctcaccaaattggatggcacc
attgctgctgtgagccaggtcctagatgagggccaccacctcgacgtgctgctggccaag
gagagaatgctcacccagatccacgaactcaaggtcctcaggggtctgctgcagccgcaa
gaggacgaccgcttcatgttcacccctccagaccaggctctatacatcgccatccaggcc
atgggtatgatcagcagtggggcctttgcccccgtcaccaaagcccacggtgagggtctg
aagaatgtgcttcgtggcaagcctgcctccttcaccgtgattggatatgatcatgatggt
gagccacgtctctccggaggggacgccgtgtctgcagttgtcatgtcagttgcagacggc
aacctgtcagcggtggaggtaacggaccaccagaatggctcgtacaccgtcagttacctc
cccaaaactgagggggagcatctcgtgtctgtgctggtgtgtaaccagcacatccagggc
agccccttcaaagtggtggtaaagtcaggacggagctatgggtccctcggctcccaggtg
tcatcgttcgggtgcgagggggagggagacggacagctgtgtcgtccttggggcatcagc
gtcgacaaggagggatacgttgtggtggctgaccgcagcaacaaccgcattcagatcttt
aaaccttgcggtgccttccaccataagttcggctctctgggatctcggcccggtcagttc
gatcgaccagccggggttgcctgtgacggtcagagacgaatcattgtggctgacaaggac
aatcaccgtgtgcaggtgtttacttttgagggccagtttctgctgaagtttggggagaag
ggtaccaagaacggacagttcaactatccctgggatgtggctgtcaactctgagggcaaa
atcttggtctcggacaccaggaaccaccgtgtgcagctcttcagccccgatggctcgttc
ctcaacaagtacggctttgaaggggctctgtggaaacacttcgactcccccaggggagta
gcctttaaccacgaagaccacctggttgtgaccgacttcaacaaccatcgactcctcgtg
atccagccggactgccagtcggctcgctttctgggctcagaaggcaccgggaacgggcag
tttctgcggccacagggcgtcgctgtggaccaggagaaccgcatcatcgtggccgactcc
cgcaaccacagaatccaaatattcgaacccaatggaaactttttatgcaaatttggcacg
caggggagtggctatggacagatggaccgcccctctggtgtggctgtgacacccgatggc
gtcattgtggttgttgactttggaaataaccgcatcctcaagttctag
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integrated database retrieval system
