Nematolebias whitei (Rio pearlfish): 119425720
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Entry
119425720 CDS
T08042
Name
(RefSeq) F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119425720
Membrane trafficking [BR:
nwh04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
119425720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
DUF5482
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
119425720
NCBI-ProteinID:
XP_037549192
LinkDB
All DBs
Position
19:35456097..35504119
Genome browser
AA seq
1448 aa
AA seq
DB search
MEEQSDITNELFESMREAVGRRVKLTLRRKVQLEVKGDKVEHRVLALASHRVYLLTARVP
SKVEQSFSYLDIQGISSNKPTQLVLDHERGPWSLRLSSVEEVDEVIAHIGICLYRICPAG
SPVKMMRKLNLKPPERLTTLQAVWNEQSSADLGPCGGFSHQYWCVCDSLGVPFREEVQWD
VDTIYLTQDTKELNLQDFVHLENRDLVSIITALEYNQWFTKLLSKDFRMSTDVCDQIFRV
VARSSRLEELVLDNAGLKSDFAQKLAGALSQNPSCTLQTLVLSNNSLEDKGVIVLSAQLA
KLPMGLKHLNLSRTSLSPKGVNSLCQALCANPMVATTLTHLDLSGNSLRGDDIQHLHSFL
SQPNHLEVLDLSNSDCSLELVCASLCKGSLKRLSVLNMSKTVFSHRKCKEIPASFKEFFS
SAQALTSVSLSGTRLPLEALKALLLGLGCNPNLSDVSLDLSSCELRSGGSQILEGCIAEI
PNISSLDISDNSLDVDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNVAQVLDNLVHMIQE
EDSPLTSLSLADSKLKGDLSIVLNALGSNTSLTKLDISGNSMGDMGAKMLAKALQINTKL
RTIVWDRNNISPQGLQDVAAALEKNYTIRFMPVPIMDAAQALKANPEKTEDALLKMEQYL
LRNHETRRYLQEQAYRLQQGIVTTTTQLMMDRMCVKVQDHLNSLRFSETISIQEDVKVAE
NLMKDAKNSKILLPNLYHLKSGGSSGACVGAIQEKIKSMALEVARVMDEQLQTMMVSMVD
AAEELCPHVMKRSSLRQELLKTGAGKMTIPPSFVTTTFMEQSGVDIINKISEVKLSMASF
LSDRIADEILESLSASQNSLADHLIRKDQPLHQDAQIETEVLDETVLQPANHDKDQKHSR
DQKHILDDMESCMMTPKSKRKSILVRMLRPVSVAFEMEFDLDKALEEVPIHIEDPPLPSP
PPPLQTPDRMSHYGDLPPPLTPADAKSVCLGELPSMEHKTLDHCTKFRPKPKKRTKPSRA
PREATGGSEQNGMMGTLDEGLDDFFTKKVIKLSFKLPLVKSSSINTPDATDKKRESRKSG
FFNYIKSRTSRSEKSHGAASITPPKLSLNTATHPSVTSPVIEETTPTSPNPPVKSPTTVA
EPHLELHRALSSNHTDPERHAHPTVDKPAVEEEEKNGKHKENMEKTENTEKKENVEKKEN
PHVHRHIGVPVMGKDLLAEMKARQERTRQMTEKKSDSTSGPDKVDAHKPKSEVHPVVPLD
TEDSKPELIPRSKPLSIIPKPAPKVPLVSRTSGPFSPTSPRSCSFSVLDDSVETPAGIQS
PKAPLPAPRLKRASSEQDRGSTSSSSAGPLSPIDVEFPADGDAFEQPISGTEPGSGSQKW
SSLKRSSCPPLAREDDRERAKSLPAYVRSPSQTETELRTAEGEIPHLTSDLKSNNKSEDE
SSDDTPSV
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacaatccgacatcaccaacgaacttttcgagagcatgcgggaggcggtgggt
cggagggtgaaactgaccctgaggcgcaaagtccagctggaggtcaaaggtgacaaggtg
gagcacagagtgctggctttggcatcacatcgagtctatctgttgacggctcgggtccct
tctaaggttgagcagtcgttcagttacttggatatccaaggaatcagcagcaacaagccc
actcaactggtgttggatcatgaacgcggtccttggagcctccgactgagctcagtggag
gaggtggacgaggtgatcgctcacatcggcatctgtctctaccggatttgccccgccggg
tcacctgtgaagatgatgaggaagttgaatctgaagcctccagagaggttgacgaccctc
caggccgtctggaacgagcagagctcggcagacctgggcccctgcggcggcttttctcat
cagtactggtgtgtgtgcgacagcctgggtgtgccgttcagagaggaggtccaatgggac
gttgacaccatctacctcactcaggacaccaaagaactcaacctgcaggactttgttcac
ctggagaacagagatctggtgtctattatcacagctcttgaatacaaccagtggttcacc
aaactcttatccaaagacttcagaatgtctacagatgtgtgcgaccagattttcagggtg
gtggctcggtccagtcgacttgaagagctggtgctggacaatgctgggctcaaaagtgac
tttgctcagaaactggccggcgctctgtcacagaacccctcctgcacacttcaaacactc
gtcctgagcaacaactccctggaggacaaaggtgtcattgttttgagtgctcagttagcc
aaattacccatgggcctgaagcacctgaacctctccagaacctccttgtctcctaaaggt
gtgaacagcctctgtcaggcgctctgtgctaaccctatggttgcaacgacgctcacacac
cttgacctttctggcaactcgctccgaggcgatgacattcagcatctgcacagcttcctg
agtcaacccaaccacctggaagttctggatctttccaacagcgactgttccctggagctg
gtgtgtgcttctctgtgcaaaggatctttaaagcgtctctctgtgctcaacatgtcaaaa
acagttttctctcacaggaagtgtaaagaaatccccgcgtcctttaaggagttcttcagc
tctgctcaggctctgacgtctgtcagtctgtcgggaaccaggctgcctctggaggctctg
aaggcgttactgctgggcctcggctgcaacccaaacctcagcgacgtgtctttggacctc
agctcctgtgagctgcgttcaggaggatcccagatcctggagggttgcatcgctgagatc
cccaacatttccagtctggatatttccgacaacagtttggatgtggatctgactactctt
cttgtgtggctggccaagaaccgctccatcagacacctttcattgggcaagaactttaac
aacatcaaatctaaaaacgttgctcaagtccttgacaacctggttcacatgattcaagaa
gaggactctccgttgacctcgctgtccctggcggactctaagctgaagggcgacctctcc
atcgtcctcaacgctcttggcagcaacacctctctgaccaaactggacatcagtggaaac
tccatgggtgacatgggggccaagatgttagccaaagccctgcagattaacacaaagctc
agaacaatagtgtgggacagaaacaacatcagccctcagggtttacaggatgtagctgct
gctttagaaaagaactacaccattcgcttcatgcctgttcccatcatggacgctgctcag
gctctgaaggcaaacccagagaagacggaggacgctttactaaagatggaacagtacctg
ctgaggaaccacgagacgcgcagatacctgcaggagcaggcgtacaggctgcagcaggga
atcgtcaccaccaccacacagctgatgatggacaggatgtgtgtcaaggtgcaggatcat
ttgaactctctgaggttctcagaaaccatctccattcaggaagacgtgaaggtggcagag
aatctcatgaaggatgctaaaaattccaaaatattgctccccaacctttaccacctaaag
agtgggggctccagtggtgcatgtgttggagccattcaagaaaaaataaagtcaatggct
ttagaggtggcaagagtgatggacgagcaactgcagacgatgatggtgtccatggtggat
gctgctgaggaactgtgtcctcacgtgatgaagaggagcagccttcgccaggagctgctg
aagaccggtgcagggaagatgacgattccccccagcttcgtaaccaccacgttcatggag
cagtcgggggtcgacatcatcaataagatcagtgaagtgaagcttagcatggcgtcgttt
ctgtccgatcgcatcgcggatgagatcctggagtctttgtcagcatcacaaaatagtctg
gcagatcatttgatcagaaaagatcaacctcttcatcaggatgcacagatcgagacagaa
gttctggatgagacagttctacagccagcgaaccatgataaggatcagaaacacagtcga
gaccagaaacacatcctggatgatatggagtcctgcatgatgactcctaaatctaagagg
aaaagtatcctggtcagaatgctgcgacccgtatcggtggcatttgagatggagtttgat
ctggacaaagctctggaggaggttccaatccatattgaggacccccctcttccctctccg
cctcctcctttacagacaccggacagaatgtcacactatggagatctgccccctcccttg
accccagcagatgcaaaatccgtgtgtttaggcgagctgccctctatggagcacaagact
ctggatcattgcaccaagttccgtccaaaaccaaagaagagaacgaaacccagcagagca
ccaagggaggccactggaggctctgagcagaacggcatgatgggaacgctggatgagggt
ttagacgacttcttcaccaagaaagttattaaactcagttttaaacttcctttggtaaaa
agttcatccatcaacactccagatgcaacagataagaaacgggaatccaggaagagtggc
ttctttaactacatcaaatcccggacgtcccgctcagagaaaagccacggagctgcctcc
atcacgccacctaaactgtcccttaacactgcaacacatccttctgtcaccagccctgtc
attgaggagaccaccccaacatctcctaacccgccagttaaatcgcctaccactgtggca
gaacctcacctggagctccacagggcactgtcctcgaaccacacagatcctgagaggcat
gcacacccaactgtagacaaacctgctgtggaggaggaggagaagaatgggaaacataag
gagaatatggaaaagactgaaaacactgagaaaaaggaaaatgtagagaagaaggagaac
cctcacgtacaccgccacattggtgttcctgtaatgggaaaagacctgctggctgagatg
aaggccaggcaagagaggacaaggcaaatgactgagaagaagtctgattcgacatcagga
cctgataaggtggacgcacacaaacccaagtccgaagtccatcctgttgtcccactggac
accgaagactccaaaccagaacttattcccagatccaaaccactgagcatcatccccaaa
ccagccccgaaagtcccgctggtatctcggacatctggacccttcagtccaacaagtccc
cgatcatgcagcttctctgttcttgatgattctgtagagactccagcagggatccagtct
cccaaagcgccacttcctgctccccgtctgaagagggcgtcatcagagcaagacagaggg
agcacaagcagcagctctgccggacctctgtctccaatcgacgttgagtttccagcagat
ggggacgccttcgagcagcccatctcgggtaccgagcctggctccggcagtcagaagtgg
tcatctctgaagcgctcgtcctgtcctccgctggccagggaggacgaccgcgagcgtgcc
aagtcccttccagcctacgtgaggtctccttctcagacagagactgagctcagaacagct
gaaggagagattccccatctgacctctgacctcaagtccaacaacaaatctgaggacgag
tccagtgacgacactccttcagtgtga
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