Nematolebias whitei (Rio pearlfish): 119425727
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Entry
119425727 CDS
T08042
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwh03016
]
119425727 (tarbp1)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119425727 (tarbp1)
Enzymes [BR:
nwh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
119425727 (tarbp1)
Transfer RNA biogenesis [BR:
nwh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119425727 (tarbp1)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119425727 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
119425727
NCBI-ProteinID:
XP_037549235
LinkDB
All DBs
Position
1:complement(53484134..53509580)
Genome browser
AA seq
1614 aa
AA seq
DB search
MHSVLMKAVLGSSPDYDLLFDSLCWTGEASCWPETERVEALTTLIEGLGPLMSDPDSAGL
TDEKKRSIHEKIESVIWSKCLPFLSRISAGADDETRCRESTAAACRLLRACVSLRGEDVQ
KRVALSILQSFQPSDDELARGHLSVQVATEVLAALMPFLTADDQLTFSTLTSALSSIRSL
PDAPLVSRITVRVVLTLLNCCSGGGRLSSILERILDDVCGWHSSERSPGATERALLCFTV
LSDHLLKPRGSPDPRLSIQFWRVVQDGLIHRDSVSRKRALYLLKRSAALSEEEGVHCPHS
ASEEEEVLFRWAPDKSRLLKEFWEDYVLVMETLEENQVHVVRPVLNRIDSLIQTAVNDSQ
GRGLLHPSWLLCVYQRMFHSENKSLMREGVGHLLELQVLQQPRFASGFSQFVVGPFMDAL
SETSLFCRSADQSVGDCPELAVKLQVFMSTFFSSLPSEERGHVLLQLIQQLGSKHWCAVP
LLFVCQALSKLPPSPLLTSSGLSALREVLRCTMITHQVLLRGAAQCFLLNSALSLTAVSE
VTLDDVFIFLTHFRADESLCRGTELWSQLCSWFLEHENGFKSRLFDGDCTDAATKKETVR
AYVQSEILSYLRVPASTGQTERLPDCREADKLATSVLVCVDMERSRLGAEISTFLESLLS
PLLDTLSRLSTNIYLPVRKSDKSLQLLLRLLQIRAEPRCQRAGSEEDNVIVALEKLFSKH
ADSIQEFILRRLCGELQELFDVERAELYLCVLRQLVRMCCNKIQPTTFPKLIKHSLAVLQ
EPTQQVSSGTNQVTRAVSMASLATVCGFMEEEGIGVKSEVLSALKPLNHYFYTSTTSPEC
PSSLGNINKCLIKPQLIDCSTDLEAQGFLQQDWGRVAAHFMWDQWICLSFLIKAVGIPEA
AENSKSSETLGAALSCSVEALSLLPSDLVLPALHFMKTLMPQLVASEEALCVRAVTLSWE
LVRALSTNAHDFWSALKGFISMAFQRKLLQLTHTEAPSLMATLKQVASELLELSQSKSGV
FGVLLQHCCQTWLPTDGCSCERADAVFSSVFSYINIVTEACVYGPVFRRDQRLVSDVQIY
VEQLGEKCAANVAVSSDDRDDQLPRTRVLTFLSCLDSSNQQHERLLEELVMQLLKTDNTI
SKSKVRYHSNSLQHRVKNRVWQTLLLLLAKLREEFVSSLLTRVFEAGFCSNQPSVKYLIE
WTMVLILARYPQHIDRFWSCFDLDHERTKTSVCTFLSVLIHFSVIIPHIKEKAAQLRKAL
DVILQSCFSHNFSVRLYALLALKKVWSLAEGLAEEEADAFRGMSSVVRACLNQAEAMQSS
GNANKNWTKIQGHFFFDTFHPVRDYSVETIFYTFPSLSELSDDEWIPLWKFEKLSLFPES
SSCPLRNPSPDLGRLQPGDWIQQDRSEQDKEERWAEVQKKITPWRLDVQNQEPELQLVPA
QRAARIGKQQGALLVVASLIDKPTNLGGLCRTCEIFGARALVLDSLHHINDKHFQSLSVS
SELWLPLLEVKPVELSDFLQAKKSEGYCIVGVEQTANSHSLQDYSFPDKTLLLLGNEREG
IPANLLQLLDVCVEIPQQGVIRSLNVHVSAALLVWEYTRQHLNPASSETNSKCE
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgcattcggttttaatgaaggcggttctgggcagttcacccgactacgatctgttgttt
gactctctttgttggacgggagaggcgtcttgttggccggagacggagcgggtggaggcg
ctgacaactctcattgaaggactaggacctctaatgtccgaccccgattcagctggactt
acagatgagaagaaacgcagcattcacgaaaaaatcgagtcggtcatctggtcgaagtgc
ctgccctttctgtccagaatatccgcaggagcagacgatgaaacgcgctgcagggagagc
acggcggccgcctgcaggctcctccgtgcctgcgtctccctgcgcggtgaagacgtgcag
aagagagttgctctctccatcctgcagtccttccagccgtcagacgatgagctggctcgg
ggacatctcagtgtgcaggtcgccactgaagttttagcagctctcatgccttttctcacc
gcggatgaccagctcacattcagcaccttgacctccgccttgtcctccatcaggtcgctc
ccggacgcgccgctggtctccagaatcacagtgcgggttgttttaactttgttgaactgc
tgcagcggtggtgggaggctttccagcatcctggagcgcatcctggatgatgtgtgcggc
tggcactcctctgagcgcagcccgggggccacggagagggccctgctgtgcttcaccgtc
ctgtcagaccacctcctgaagccccgtggctccccggacccccggctctccattcagttc
tggagggtcgttcaggacggactgatccacagagacagcgtgtcacgtaagagggcactg
tacctgctgaagaggagcgctgctctgtctgaggaggagggggtgcactgcccccactct
gcatcagaggaggaggaggtgttgttcagatgggcccctgataagagcaggctgctcaag
gagttctgggaggattatgttttggtgatggagactctggaggaaaaccaggttcatgtt
gtccggccagttttaaacagaatagattctctgatccaaacggcagtgaatgacagtcaa
ggccggggcctcctccacccgtcctggctgctgtgtgtgtatcagcggatgttccacagt
gagaataaatccttaatgagagaaggagtgggccatctgctcgagctgcaggtcctccag
cagccccgcttcgcctcaggtttttctcagtttgtcgtcggtccatttatggacgcgctt
tctgaaacgtcactgttctgcaggtcagctgatcagagcgtaggagactgtcctgagctg
gctgtgaaactccaggtcttcatgtccacctttttcagcagcctgccatcagaagagaga
ggtcacgtgttgctccagctgatccagcagctgggctctaagcactggtgtgcagtaccc
cttctctttgtctgtcaggctctgtccaaactccccccgagtcctctgctgacgagcagc
gggctctctgctctcagagaggtgctgcgctgcaccatgatcactcatcaggtcctgctg
agaggagctgctcagtgctttctgctgaacagcgccctctctctgacagcagtgagtgaa
gtgaccttagatgacgtgtttatttttctgacacatttccgtgcggatgaatcgttgtgt
agagggacggagctctggagccagctgtgttcctggtttttggaacatgaaaacggtttt
aaatccagattattcgatggagattgcactgatgctgccacaaaaaaggaaactgtcaga
gcttacgttcaaagcgaaatactctcctatctccgggttccagcaagcacgggtcagact
gagaggttacccgactgcagggaggctgataagctggccacatctgtcctggtgtgtgtg
gacatggagaggagccgcctgggagcagagatcagcaccttcctggagtctctgctgtcg
cccctgctggacacgctgagcagactcagcaccaatatctacctgcctgtacggaagagc
gataagagcctgcagctcctgctgcgactgctgcagatcagagccgagccacgctgtcag
cgagcaggaagtgaggaagataatgtgattgttgccttggaaaagctgttttctaaacat
gccgattcaatccaggagtttatcttgaggcggctgtgtggggaactgcaggagctgttt
gacgtggagcgagcagagctctatctgtgtgtcctgaggcagctagttcgcatgtgctgc
aataaaattcagccgactactttccctaaactcatcaagcacagccttgcagtcttgcaa
gaaccaacccagcaggtctcgtctgggacaaatcaggtgaccagagctgtcagtatggcg
tccctggccactgtctgtggttttatggaggaggaagggattggcgtaaaatctgaggtc
ctttctgctctcaaaccactgaaccattacttctatacttcgacaacgtccccagaatgt
ccgtcatctctgggaaacatcaacaaatgtctcattaaaccgcagctaatagactgctca
accgacctagaagcacaaggctttctgcagcaggactggggtcgcgtcgcagcccacttc
atgtgggatcagtggatttgtctgagcttcctgattaaagctgtggggattcccgaggct
gcggagaattccaaatcatccgagactctcggtgccgctctgagctgcagcgtcgaggct
ctttctctgctgcccagtgacctggtgctgcctgcgctccacttcatgaaaacactgatg
ccacaactggtggccagtgaggaggccctctgtgtgcgggcggtgactctgagctgggag
ctcgtacgggcgctcagcacgaatgctcacgacttctggtcagctttaaaaggtttcatc
tccatggcctttcagcgcaaactcctccagctgacacacaccgaggctcccagcctcatg
gccaccttgaaacaggttgcgtcagagctgctggagctgtctcagtcaaaaagtggcgtg
ttcggtgtgctgcttcaacactgctgtcagacatggcttcccacagatggctgcagctgt
gaacgagcagacgccgtattttctagtgtttttagctacatcaacatagtcactgaggct
tgtgtttatggaccggtcttcaggagagatcagagacttgtttcagacgtccaaatatat
gtggagcaactcggtgaaaagtgtgctgctaatgtcgcagtttccagtgacgacagggat
gatcagctgccccgcacacgtgtgctgacattcctgagctgcctggattcatccaatcag
caacatgaaagactcctagaagagttagttatgcagttgttgaaaacggacaacacaata
tcaaagtctaaagtacgttaccatagcaactccctgcaacatcgggtcaaaaacagagtg
tggcaaacgctgctgctgttgctggccaaactccgagaggagtttgtttcctctctactg
acgcgcgtgtttgaagctggcttttgcagtaaccagccctcggtgaaatacttgatcgaa
tggacgatggttctaatcctggcccggtacccgcagcacatcgacaggttttggtcctgc
ttcgatctggatcatgaacggaccaaaacaagcgtgtgcacgttcctgtctgtcctgata
catttcagtgtcattatcccacatattaaagagaaggcggcgcagctgcgtaaagccctg
gacgtcatcctgcagtcgtgtttcagccacaacttcagcgtgcgtctgtacgccttactg
gccctgaagaaggtgtggagcctggctgaaggcctggcggaggaggaggccgatgctttt
agagggatgtcgtctgtggtcagagcctgtctgaaccaggctgaggccatgcagagttct
ggaaatgccaacaagaactggacgaagattcaggggcacttcttcttcgacacctttcat
cctgtcagagattatagtgttgagaccatattctacacttttcccagtctatcagagtta
tctgacgacgagtggattccactatggaagtttgagaagctgtctttgtttcctgaaagt
tcgtcgtgtcctttgagaaatccttctcctgatttgggccggctgcagcctggagactgg
attcagcaggacagaagtgaacaggataaggaggagcgctgggccgaggtgcagaagaag
atcacaccctggaggttagacgtccagaatcaggaaccagaacttcagctggttccagca
cagagagctgctcggattggcaagcagcagggcgccctgctggttgttgcttcgctcatc
gacaagcccaccaatttgggaggtctttgcagaacatgtgagatatttggcgccagagct
ctggttctggacagcctccatcacatcaatgacaaacacttccagtccctgagcgtctca
tctgagctctggcttcctttgttagaggtgaagcctgtggagctctctgatttcctgcag
gcgaagaagagtgagggttactgtattgttggggtggagcagactgccaacagccacagc
ctccaggactacagcttccctgataaaacactgcttcttctgggcaatgaacgagaagga
attcctgcaaacttactccagctgttggatgtgtgcgtggagatccctcagcaaggggtc
atccgctcgctcaatgtgcacgtgagcgccgccttgttggtttgggaatacacacggcag
cacctcaaccctgcttcgtctgaaaccaactcaaaatgtgaataa
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