Nematolebias whitei (Rio pearlfish): 119425877
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Entry
119425877 CDS
T08042
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119425877 (atxn1a)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
119425877
NCBI-ProteinID:
XP_037549359
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Position
19:25952146..25972144
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AA seq
805 aa
AA seq
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MKSNQERSNECLPPKKRGTSSTLPCENRSPTIAAVGDSQRVENMTCPSVAGGKETSTGPH
LSSSQSDGPHYKSPSSLPDSSSLRLVSTLPAVYTSPLSQSTVGGTVHYTQLPPNMQFITS
TYTPPYTGYLSPQLLPPPPPPPPLSSSFSSATHRPLYTETTSGPSQISKHNQQRVNMGRT
SMPPPSTDPVPHHNQMSTSPRTAPSPHHQGGAHLPSQSIHPHYNLGAGMSQLVVKYMDGP
TRKEEVGPRHRELLNGELERVRRIGSSCESSLSKSGSKSREAMSPLSSYEVRSLVTPSDY
SVPDHLGLRTSVMLMPNSHGDHQLVPPRTSPEKLTASAPAHLEKGGIVMGKPVSRTASSS
HTTCSFTFPPPQSAESLKAAVGTFSPQTVIQTTHNATEPLSMGLPSTTIYPQPPIIGYIA
GGSGSSYHTSLQQHLLISGTQPVIIPVSGGGVPTLEPVTSHITSSTQASSFPGTLPHTYI
AATAQKGETLDAQSGPIHIASSGAVVQAQLHLPIVPTSPGLVTATTPPVPTTPSLPPYFI
KGSIIQLADGELKRVEDLKTDDFIQSAEISSDLKIDSSTVVRIEGSHGSPNCAVVQFAVG
EHRAQVSVEVLLEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSVGDVCISLTLKNLKNGS
LKKTQPLELITQTSTLPPSHWHLKAPRAVSDAPQSCSGGNSRHKEWENGISQRGSGESGI
GSGEGSSVENGDVVFGDRGSVCKAQVGGSTEAGSSKPGGRKRRWSAPEGRKVEKSEEEPP
LTLPKPSFIPHEVKVSIEGRSNNGK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaaaccaggaacgcagtaatgaatgtctaccccccaagaagaggggcacgtcg
agcacgttaccatgtgaaaatcgctcacctaccatagcagctgttggtgacagccagcgc
gtggagaacatgacctgtcctagtgtggctggtgggaaagagaccagtacgggtccacac
cttagctccagtcagtctgacggaccccactataagtccccctcctccttaccagattct
tcctcactgaggctagtgtcaacgcttcctgcagtgtacacatctcccctgtcacagtcc
acagttggaggaactgtccattacacacagctgcctcccaatatgcagtttataacttca
acctatactcctccatacacgggctatctttcccctcagctattaccacctcctcctcca
cctcctccactctcctcctccttttcctcagccacacatagacccttatacacagagaca
acatctggtccctcacagatctccaaacacaatcagcagcgagtgaacatgggccgcacc
tccatgcctcctccatctacagaccctgtccctcatcacaatcaaatgtcaacatcccca
cggactgcaccgtcaccacaccaccaaggaggcgctcaccttccatcccagtccatacat
ccccactacaatttaggagctggtatgtcccagcttgtggtgaaatatatggatgggccc
accaggaaagaggaagttggccccagacacagggagcttctcaacggggagctggaacga
gtcagacggattggatcgtcttgcgagtctagtctctcaaagtcagggagtaaatcaagg
gaggccatgtcacctttgtcttcctatgaggtccgctcgctagttactccatcagactac
tctgttcctgatcacttaggcttgagaacctctgtcatgttgatgcctaatagccatggg
gaccaccagttggtaccacctagaaccagccctgaaaagctgacagcttctgcccccgca
cacctggagaaaggtggcattgttatgggcaagcctgtcagtcgcacagcctcctcatct
cacaccacctgttctttcacatttccacccccacaaagtgcagagagtctgaaagcagct
gttggcacattttcaccccagactgtgatccagaccacccacaacgctacagagccactg
tcaatgggactcccttctacgactatctacccacaacctcctattattggttacattgca
gggggcagtgggagcagttaccacaccagcctacagcaacacttactcatttcaggcacc
caacccgtcatcatcccggtcagtggtggtggagtccccacactggaaccagtaacctcc
cacattacatcatctacccaagcctcatcttttcctggtacactcccacatacatacatc
gctgccactgcccaaaaaggagaaactctggacgcccaaagtggcccgatccacattgct
tcttcaggtgcagtggttcaagcccagcttcatctccccattgttcccacttcgcctggg
ctggtcacagccaccactcctcctgtccccactactccttctctcccgccatacttcatc
aagggttctatcattcagttggctgacggggagctgaaacgagtggaggacctgaagaca
gatgacttcattcagagtgcggagatcagcagtgacctgaaaattgattcatccacggta
gtgcggattgaagggagccacggctcacctaactgtgctgttgttcagttcgccgttggg
gagcatcgcgcacaggtgagtgtggaagtcttgctggagtaccccttcttcgtctttggc
caaggatggtcttcctgctgccccgaccggaccacccagcttctggaactaccttgtacc
aagctttctgtgggagatgtttgtatttcactgacactaaagaacctgaagaatggatct
ctgaagaagacccaaccactggagctaatcacccaaacgtctaccctacccccaagccat
tggcacctgaaagcccccagagctgtctcagacgccccccagagctgcagtggaggaaac
tccaggcacaaggagtgggagaatgggatcagccagcgggggagcggtgaaagtgggatt
gggagtggagagggttccagtgtggaaaatggagatgtcgtgtttggagacaggggatct
gtttgcaaagctcaggttggtggcagcacagaagctggctccagtaagccaggaggcagg
aagaggagatggtctgctcctgagggtcgaaaagtagaaaaatctgaggaagagccacct
ttgaccttgcctaaaccttcattcatccctcacgaggtgaaggtcagcattgagggaagg
tcgaataatggcaagtaa
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