Nematolebias whitei (Rio pearlfish): 119425934
Help
Entry
119425934 CDS
T08042
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119425934 (vps52)
Membrane trafficking [BR:
nwh04131
]
Protein recycling
Others
EARP complex
119425934 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
119425934 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
MscS_porin
Motif
Other DBs
NCBI-GeneID:
119425934
NCBI-ProteinID:
XP_037549417
LinkDB
All DBs
Position
19:34401726..34417192
Genome browser
AA seq
723 aa
AA seq
DB search
MAEAVSGSVGSGSDVNTAENPTQIAMAYLQDEKTEDITNLNLGELDITTDEFILDEVDNH
IQANLEDDLVKEALKTGVDLRQYSKQVEAELQKIEQASIKDYIKESQNIALLHNQITACD
SILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVVPGA
MISTILDSPVTEQEFLEQLHELNSKINFAKELSFRETLACSDIQDIVDRLKVKAVSKIRE
FILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSYF
KSYSSRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAILSPAELE
GPILVPHTAQRGDSRYPYETLFRSQHYALLDNGCREFLFLSDFFMVIGNSALDLFNSIMG
KTLSMFLKSMSTYVSDCYDSIAIFLCIHIILRFRAITAKRNIPALDKYWDAVLELLWPRF
ELILELNIQSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTNALLGQLQ
AEVENFVLKMAAEFPSRRDQLIFLINNYDMMLSVLMERAADDSKEVESFQQLLLARTQEF
IEEILSPPFGGMIAFVKEAEALMEKGQLDRLKNEEARITQLVRGFSSTWKQSVESMSQDV
MRSFTNFKNGTSIIQGALTQLIQYYHGFHKILNQPTFRSLAVRSELINLHHLMVEVKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcagtttcgggttctgttgggtccggttctgatgtaaacacagcagaaaac
ccaacacaaatcgccatggcgtatctacaagacgagaagactgaagacattactaacctc
aacctgggagaacttgacatcaccactgatgaatttatcttagatgaagtggacaatcat
attcaggccaatctggaagatgatcttgtgaaggaggcactcaaaacaggcgttgacctt
cgtcagtattccaagcaggtggaagcagagctgcagaagattgaacaggcttctatcaaa
gactacattaaagagagccagaatatcgctcttctccacaaccagatcactgcctgtgac
tccatattggagcgcatggagggcatgctgagcggctttcagagtgacctgtcctccatt
agcagtgagatccagaccctgcagcagcagtcagtcagcatgaacgtccgtctgaagaac
aggcaggccgttcgcagccacctcagccagctggtggatgagctggttgtgcccggagcc
atgatctccaccatcctggacagtccggtgacggagcaggagtttcttgagcagcttcat
gaactcaactccaaaatcaactttgccaaagagctgagcttcagagagacgctggcctgc
tccgacatccaggacattgttgatcgtcttaaagtcaaggcggtttcaaaaatccgagag
ttcattcttcagaagatctattccttcagaaaaccaatgacgaactatcagatcccacag
aacactctgctgaaatacaggttcttctatcagttccttttggccaacgagagaactgta
gccaaggagatcagagacgagtacgtggacacgatgagcaagatttactatagttacttc
aagtcctacagcagcagacttctcaaagttcagtatgaggaggtggcagacaaagacgac
ctgatgggcgtggaagacacagcaaagaaaggtttcttttccaaaccgtctttgaagagc
aggaacactatcttcactttgggccagaggggggccattctgagtcccgccgagctggag
gggcccatcctggttccacacacggctcagagaggagacagcaggtatccctatgagacg
ctgtttcgcagtcagcactacgctctgctggacaacggctgcagagaattcctcttcctg
tcggacttcttcatggtgatcggaaactctgccctggacctcttcaacagcatcatgggg
aaaactctcagcatgttcttgaaaagtatgtccacctacgtgtcggactgctacgacagc
atcgccatcttcctctgcatccacatcatcctccgcttcagagccatcacagccaagagg
aacattcctgctcttgacaagtactgggacgccgtgttggagctgctgtggccgaggttt
gagctcatcctggagctgaacatccagagcatcagaaacacagaccctcagaaactggga
gttctggacaccagaccgcactacatcactcgacgttacgcagagttctcctcagccatc
gtcagcatcaaccaaacgtttcctaacgagaggaccaacgctctgctgggccagctgcag
gctgaggtggaaaactttgtgctgaaaatggccgcagagtttccctccaggagagaccag
ctcatcttcctcatcaacaactacgacatgatgctcagcgttctcatggaaagagcagca
gacgacagtaaggaggtggaaagttttcagcagctacttctggccagaacacaggagttt
atcgaggagattctgtctcctccctttggaggcatgattgccttcgtgaaggaggccgag
gcgctgatggagaagggacagctggaccgactgaagaatgaggaagctcgcatcactcag
ctggttcgaggtttttccagtacttggaaacagtcggtagagtcgatgagtcaagacgtc
atgaggtccttcaccaacttcaaaaacgggaccagcatcattcagggcgccctaacccag
ctcatccagtactaccacggctttcacaagatcctgaatcagccgacgttccgcagcctg
gccgtccgctccgagctcatcaaccttcaccacctcatggtggaggtcaagaagcacaaa
cccaacttctaa
DBGET
integrated database retrieval system
