KEGG   Nematolebias whitei (Rio pearlfish): 119425982
Entry
119425982         CDS       T08042                                 
Symbol
bop1
Name
(RefSeq) ribosome biogenesis protein bop1
  KO
K14824  ribosome biogenesis protein ERB1
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nwh03009]
    119425982 (bop1)
Ribosome biogenesis [BR:nwh03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    119425982 (bop1)
SSDB
Motif
Pfam: BOP1NT WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_TEP1_C DUF4785_1st Beta-prop_IFT122_1st Beta-prop_DCAF12 CDC27
Other DBs
NCBI-GeneID: 119425982
NCBI-ProteinID: XP_037549470
LinkDB
Position
19:32141466..32149318
AA seq 756 aa
MAVSTKRLMEGSKKSVQVIEKRAGMEKKKTTVKKRSLQEEEDQLINFSKEPVNEDDADLS
DSEDSVYSGLEDSGSDSEEEEEESDEEEGSDDDDADEDNEEDESQQTEVKKSKEKEEESE
EKEVKRADEYQHDSSDEEDIRNTVGNIPMEWYKDFPHIGYDLDGKKIFKPIRNKDELDEF
LDKMENPDYWRTVHDKKTASDIVLSDDQIELVNRLQRGQFGDVNFNEYEPTVEFFSKDVM
IHPVTNRPADKRSFIPSLIEKQKVSKLVHAIKMGWIKPRRVEDDSRGHYYDLWASEDTSI
LARHKMHLPAPKTRLPGHEESYNPPPEYLFTEEEQALWDQQDPLDRKLPFIPKKFSSLRQ
VPAFSRFIHERFERCLDLYLCPRQRKMRVNVNPEDLIPKLPKPKDLQPFPTTQSLVYRGH
SSLVRSISASPSGQWLASGSDDGTVRLWEVCTSRCLKTVQVGGAVKSVAWNPNSSFCLLA
VAVNSEVLILSPGLADRQVISSSERLLAAEHEEEPSEASGTVVWSNTEGEELNHGIRLKI
QHPKAVHQVTWHTKGDYLATVMPDHSSHLQVFIHQVSRRRSQNPFRRNKGLVQCVAFHPI
RPYFFVATQRSVRIYNLVKQEMTKKLQANSKWISSIAIHSGGDHVICGSYDCRLSWFDLD
LSTKPYKLLRHHKKAVRSVAYHRGYPLFASASDDGSVIVCHGTVYNDLLQNPLIVPVKVL
RGHAITHDLGVLDVTFHPTQPWVFSSGADATVRLFT
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggcggtatccacgaagcgtctcatggaggggagcaaaaaaagcgtgcaggttatcgaa
aagagagcagggatggagaagaaaaagacaacagtcaagaagaggagtttacaggaggag
gaggatcagctcatcaacttcagcaaggaacctgttaatgaggacgatgccgatctatca
gacagtgaggacagtgtctactctggactggaggattctgggagtgactcagaagaggag
gaggaggaatcagatgaggaggagggatcagatgatgatgatgcagatgaagataatgag
gaggatgagagtcaacagacagaggtaaagaagagtaaggaaaaagaagaggagagtgaa
gaaaaggaagtaaagagagcagacgagtatcaacatgacagctcagatgaggaggacatc
agaaacacagtgggcaacattcccatggagtggtacaaagacttccctcacattggctac
gatctggatgggaaaaagatctttaagccaattaggaacaaggatgagcttgatgagttc
ttggacaaaatggagaatcctgattactggagaacggtccacgacaagaagacagcaagt
gacatcgtgctgtcagacgaccagatcgagctggtgaatcgtctgcagagaggacagttt
ggggatgtcaacttcaatgagtatgagcccactgtggagttcttcagtaaagatgtcatg
attcatccagtcacaaacagacctgcagacaaacgcagcttcatcccatcattgattgaa
aagcagaaggtgtccaaactagtgcatgctatcaaaatgggttggattaaacctcgacgg
gtagaggatgacagcagagggcattattacgacctgtgggctagtgaggacacttctatt
ttagccaggcacaaaatgcaccttccagcccctaaaacccgtctgcctggtcacgaggag
tcctacaaccccccacctgagtacctgttcacagaagaggagcaagctctgtgggatcag
caggatccgttggacaggaagctgcctttcattcccaagaagttctccagtcttcgtcag
gttccagcgttttctcggtttatccacgagaggtttgagcgctgccttgatctttacctg
tgtccccgacagaggaagatgagggtgaacgtgaatcctgaagatctgattccaaaactt
cccaaaccaaaagacctgcagcctttcccgacaactcagtctctggtgtatcgaggtcac
agtagtctggttcggtccatcagtgcgtctccttcaggacagtggcttgcttcaggcagt
gatgatggcaccgtcaggttgtgggaggtgtgcacatctcgctgtttgaaaacggtccag
gtgggcggagctgtgaagagcgtggcgtggaaccccaactcgtctttctgtctcctggct
gttgccgtgaactcggaggtcctgattttgtctcctggtctggcagacagacaggtcatc
tcatcgtcagagcgacttctcgctgctgaacacgaggaggagccatcagaggcgtcgggc
actgtcgtctggtctaacactgagggggaggagctaaatcacggcattcgtctcaaaatc
caacatcctaaagctgtccaccaggtgacgtggcatactaaaggagactacctggcgacg
gtgatgcctgaccactcgagccacctgcaggtgttcattcaccaggtgagccgaaggcgg
agccagaatcctttcaggaggaacaaagggcttgtccagtgtgtagccttccaccctatc
aggccctacttttttgtggccacccagcgttctgtcaggatctacaacctggtcaaacag
gaaatgaccaaaaaactacaagccaactccaagtggatctctagcatagccatccactct
gggggtgatcatgtgatctgtgggagctacgactgcaggctgagctggttcgacctcgac
ctctcaacgaaaccctacaagttgctgcgacaccataagaaggcggtgaggagtgtggcc
tatcacagaggttacccactgtttgcctcggcatcagatgatggatcagtgatcgtctgt
cacgggactgtttacaacgacctgctgcagaacccgttgatagtccctgtaaaagttctg
agaggtcatgcaatcactcatgaccttggtgttctggatgtgacctttcaccccacacag
ccctgggtcttctcctccggggctgacgccaccgtccgactcttcacctaa

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