Nematolebias whitei (Rio pearlfish): 119425982
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Entry
119425982 CDS
T08042
Symbol
bop1
Name
(RefSeq) ribosome biogenesis protein bop1
KO
K14824
ribosome biogenesis protein ERB1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwh03009
]
119425982 (bop1)
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119425982 (bop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_TEP1_C
DUF4785_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
CDC27
Motif
Other DBs
NCBI-GeneID:
119425982
NCBI-ProteinID:
XP_037549470
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Position
19:32141466..32149318
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AA seq
756 aa
AA seq
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MAVSTKRLMEGSKKSVQVIEKRAGMEKKKTTVKKRSLQEEEDQLINFSKEPVNEDDADLS
DSEDSVYSGLEDSGSDSEEEEEESDEEEGSDDDDADEDNEEDESQQTEVKKSKEKEEESE
EKEVKRADEYQHDSSDEEDIRNTVGNIPMEWYKDFPHIGYDLDGKKIFKPIRNKDELDEF
LDKMENPDYWRTVHDKKTASDIVLSDDQIELVNRLQRGQFGDVNFNEYEPTVEFFSKDVM
IHPVTNRPADKRSFIPSLIEKQKVSKLVHAIKMGWIKPRRVEDDSRGHYYDLWASEDTSI
LARHKMHLPAPKTRLPGHEESYNPPPEYLFTEEEQALWDQQDPLDRKLPFIPKKFSSLRQ
VPAFSRFIHERFERCLDLYLCPRQRKMRVNVNPEDLIPKLPKPKDLQPFPTTQSLVYRGH
SSLVRSISASPSGQWLASGSDDGTVRLWEVCTSRCLKTVQVGGAVKSVAWNPNSSFCLLA
VAVNSEVLILSPGLADRQVISSSERLLAAEHEEEPSEASGTVVWSNTEGEELNHGIRLKI
QHPKAVHQVTWHTKGDYLATVMPDHSSHLQVFIHQVSRRRSQNPFRRNKGLVQCVAFHPI
RPYFFVATQRSVRIYNLVKQEMTKKLQANSKWISSIAIHSGGDHVICGSYDCRLSWFDLD
LSTKPYKLLRHHKKAVRSVAYHRGYPLFASASDDGSVIVCHGTVYNDLLQNPLIVPVKVL
RGHAITHDLGVLDVTFHPTQPWVFSSGADATVRLFT
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcggtatccacgaagcgtctcatggaggggagcaaaaaaagcgtgcaggttatcgaa
aagagagcagggatggagaagaaaaagacaacagtcaagaagaggagtttacaggaggag
gaggatcagctcatcaacttcagcaaggaacctgttaatgaggacgatgccgatctatca
gacagtgaggacagtgtctactctggactggaggattctgggagtgactcagaagaggag
gaggaggaatcagatgaggaggagggatcagatgatgatgatgcagatgaagataatgag
gaggatgagagtcaacagacagaggtaaagaagagtaaggaaaaagaagaggagagtgaa
gaaaaggaagtaaagagagcagacgagtatcaacatgacagctcagatgaggaggacatc
agaaacacagtgggcaacattcccatggagtggtacaaagacttccctcacattggctac
gatctggatgggaaaaagatctttaagccaattaggaacaaggatgagcttgatgagttc
ttggacaaaatggagaatcctgattactggagaacggtccacgacaagaagacagcaagt
gacatcgtgctgtcagacgaccagatcgagctggtgaatcgtctgcagagaggacagttt
ggggatgtcaacttcaatgagtatgagcccactgtggagttcttcagtaaagatgtcatg
attcatccagtcacaaacagacctgcagacaaacgcagcttcatcccatcattgattgaa
aagcagaaggtgtccaaactagtgcatgctatcaaaatgggttggattaaacctcgacgg
gtagaggatgacagcagagggcattattacgacctgtgggctagtgaggacacttctatt
ttagccaggcacaaaatgcaccttccagcccctaaaacccgtctgcctggtcacgaggag
tcctacaaccccccacctgagtacctgttcacagaagaggagcaagctctgtgggatcag
caggatccgttggacaggaagctgcctttcattcccaagaagttctccagtcttcgtcag
gttccagcgttttctcggtttatccacgagaggtttgagcgctgccttgatctttacctg
tgtccccgacagaggaagatgagggtgaacgtgaatcctgaagatctgattccaaaactt
cccaaaccaaaagacctgcagcctttcccgacaactcagtctctggtgtatcgaggtcac
agtagtctggttcggtccatcagtgcgtctccttcaggacagtggcttgcttcaggcagt
gatgatggcaccgtcaggttgtgggaggtgtgcacatctcgctgtttgaaaacggtccag
gtgggcggagctgtgaagagcgtggcgtggaaccccaactcgtctttctgtctcctggct
gttgccgtgaactcggaggtcctgattttgtctcctggtctggcagacagacaggtcatc
tcatcgtcagagcgacttctcgctgctgaacacgaggaggagccatcagaggcgtcgggc
actgtcgtctggtctaacactgagggggaggagctaaatcacggcattcgtctcaaaatc
caacatcctaaagctgtccaccaggtgacgtggcatactaaaggagactacctggcgacg
gtgatgcctgaccactcgagccacctgcaggtgttcattcaccaggtgagccgaaggcgg
agccagaatcctttcaggaggaacaaagggcttgtccagtgtgtagccttccaccctatc
aggccctacttttttgtggccacccagcgttctgtcaggatctacaacctggtcaaacag
gaaatgaccaaaaaactacaagccaactccaagtggatctctagcatagccatccactct
gggggtgatcatgtgatctgtgggagctacgactgcaggctgagctggttcgacctcgac
ctctcaacgaaaccctacaagttgctgcgacaccataagaaggcggtgaggagtgtggcc
tatcacagaggttacccactgtttgcctcggcatcagatgatggatcagtgatcgtctgt
cacgggactgtttacaacgacctgctgcagaacccgttgatagtccctgtaaaagttctg
agaggtcatgcaatcactcatgaccttggtgttctggatgtgacctttcaccccacacag
ccctgggtcttctcctccggggctgacgccaccgtccgactcttcacctaa
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