Nematolebias whitei (Rio pearlfish): 119426037
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Entry
119426037 CDS
T08042
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh02010
ABC transporters
nwh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119426037
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119426037
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119426037
Transporters [BR:
nwh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119426037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
ABC2_membrane_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
119426037
NCBI-ProteinID:
XP_037549875
LinkDB
All DBs
Position
1:26923185..27226097
Genome browser
AA seq
2181 aa
AA seq
DB search
MGLLTQFSLLLWKNFTLRKRQKVRLVVELLWPLFLFFILVLVRTTNKPIYKGQCHYPNKA
MPSAGVLPWLQGLMCNIDNPCFDYPTPGETPGQVNNFNNSIIAGILIELQTSLVDRSVLS
KARLLVDDANQWSSLLSRSNPGSVTVRSILKDNETFTTYLTQNLSVPPAVVRSLMNAQIQ
FNLMMGMPRPDNVMSILCEGTNLDEYVQFSSQAEREAFQNVSCSLTQQQLINTQQVFLQN
LDGRKVLSGLPSALDLNATDTVALMRKTTTSALPVIEEVVRLQNSAIFKAADSLDFQDDM
MGSINMLLCGKKPDINSTKMSFRLPSPRQTANNTSNLGNSSNDFCQTLIDTLEGTPGLRY
IWSAFRPLLRGKVLYAPDTPAARLLVKEANSTFNALAMLKELADSWEELGPRVWDFMQNS
PQVNALRTLLANPIVAEALNKRLAGTRWSSKLLGNFLYNGPPEDRPAGMPHYDWRDAYNA
TTEILKLLSKFLGCLDLNKFEAVETEGHLVNKALEHLNNDTFWAGVVFENLQLNSSHIPP
YVKYKIRMDIDEVERTNKVKSRSWSPGARDNAFNDLRYIWGGFAYLQDMMDHAVIRLKTS
KTQPLGVFVQQIPYPCFVDDVFIQSIGTVLPMFLILAFMYSVCMSIKSLVLEKELRLKEV
LRAVGVQSGALWAARFTENIVLLTVPCAIISVMVKYGKVLQYSDPSVIFVFLLVFCLATI
SQCFFISVFFSKANLAAACGGLIYFLLYLPHVLCYAWRDVMGFGAKVAVSLLSCVAFGYG
CEKFSKYEEQGIGIQWHNIGKSPEEGDRYTFIVSIVMMLLDALLYWVLTWYIENVFPGQY
GIPKPWYFPFTSSYWCGTASAPEHNPDLLLHSTANDEYMEKPPPDIKAGVSIRNLVKIYK
TGKKLAVDGLSLDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALISGYDIRTDID
IIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGRSRSEVESEMDQMIKDVGLPHKRKELA
KNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHH
MDEADILGDRIAIISHGKMRCCGSSLFLKKCFGSGYYLTLVRSGTEKMSNQRQNMTQRHI
NEKKTETDCPSRSSPDDGIGSQTWDNSDPTDLAAVTQLVRCHVPEAVFLESIGQEITFIL
PYSGARDGTFSALFQKLDLAMADLGLTSYGISDTTLEEIFLKVAEDTEVDAEIPAAKEPL
VRDWKRSSRKSKRNSIASVRSKMEHFNGMSDLKERFSSKVADCKKSASINGRGSMVITGW
KLIRRQFLALFIKRFHHARRSRKGLIAQVILPAFFVCLSLIFSLIVPPFADYPSLELQPW
MYGLPQTTFYSKDLQENVEVSKVVETLVNNPGFGTRCMTEDPIPIQNTTDTLLNLTGRNM
TDFLVKTFEHFGKKRYGGISVGAINSQVRLTEAGIQEVLRDLKDLFNSSQDNVTDQTFQR
AETLLKKLGTRDNVKVWFYNQAWHSMVSFLSVANNGILRGNLPVGQNLRQHGISISNHPL
NLTKEQLSFMAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPA
VYWLANFAWDMCNYIIPCFIVIMIFLAFQQKAYVSPPNLPALILLLILYGWAITPMMYPA
SFMFSVPSTAYVVLTCINLFIGINGSVATFIMELFDDDNVAHINNIVKQVLLIFPHFCLG
RGLIDMATNQAMATLFSSFGENRFKDPLSWEMVGKNLCAMSIQGIVMFTFTILIQYKFFC
KPRLISVKAPSAEEEDVDVARERRRVYEGKAQNDLLTIYDLTKVYPRKSAPAVDRLCVGV
PAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMSYVHQNLGYCPQFDA
INDLLTGREHLEFYGRLRGVPENEVATVAEWGIQKLGLVKYANKSAGTYSGGNKRKLSTA
IALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAI
MVNGCFKCLGSIQHLKNRFGDGYTVIVRVAGSPPELKPVEDFVQQTFPGSVLKESHHNTL
QYQLPHAPGALANIFGHFTSHQQRLGLEDYSVSQTTLDQVFVNFASHQHDEDDSRAYSNP
VDISDELPLNAVQTSNEAKTV
NT seq
6546 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttttcactgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggttgttgagctgttgtggcccctgtttctcttcttcatcctggtg
ttggtgaggaccaccaacaaacccatttacaaaggtcaatgtcactacccaaacaaagcc
atgccatctgcaggtgttctgccctggcttcaaggtttgatgtgtaacatcgacaatccc
tgttttgactatccgacgccgggggagacaccgggccaagtcaataacttcaacaactcc
ataattgctgggatcttaattgagctgcaaaccagtttggtagaccggtctgttctcagt
aaggcacggctgctggtggatgatgccaaccagtggtcttctctcctgtctcggtccaac
cctggcagtgtcaccgtgaggagtattctgaaagacaatgaaactttcaccacgtatctg
acccagaatttgtcagttccaccagcagtggtccgaagcctcatgaacgctcagatccaa
ttcaatcttatgatgggcatgccaaggccagacaatgtgatgagcatcctgtgtgagggg
acaaatctggatgagtatgttcaatttagcagccaagccgagagggaggcttttcaaaat
gtcagctgctccctcactcaacagcagctgattaacacccagcaagtcttcctgcaaaac
ctggatggaaggaaagtgctttctgggctaccttcagctctggacctgaatgcaaccgat
acagtggcactaatgaggaaaaccaccaccagtgcattaccagtgattgaggaggttgtc
cggctgcagaactctgcgatctttaaggcagctgattccttggatttccaagatgacatg
atgggaagtatcaatatgttactgtgtggaaaaaagccagacattaattccaccaaaatg
tccttccgtctaccatcaccaagacagacggctaacaacacttcaaacctgggcaacagt
tctaatgatttctgtcagactcttatcgacaccctggagggcacacctggactgcgctac
atttggagcgccttcagaccgttactgcgagggaaggtcctgtacgcgcctgatacacct
gctgctcgtctcctggtgaaagaagcaaatagcacgttcaacgccctggctatgctaaag
gagctcgcggattcatgggaggaacttgggccacgtgtctgggactttatgcagaacagt
cctcaggtcaacgcgttgcggactttgctggcaaatcctattgttgctgaggccctcaac
aagcgtctcgctggcaccagatggtcgtccaagctgctggggaacttcctgtacaacgga
cctcctgaagaccgtccagctgggatgccacattacgactggagagatgcttacaacgcc
actaccgaaatcttgaagctcctctccaaattcctcggctgtttagatctgaataagttt
gaggcagtcgagaccgaaggtcatctggtgaacaaagccctggagcatctaaacaatgat
acattttgggctggtgttgtctttgaaaacctccagttaaactccagccatatccctcct
tatgtcaagtacaaaatccggatggacattgatgaggttgagcgtaccaacaaagtgaaa
tccaggtcatggtctcctggagccagagacaatgcctttaatgacctgcgctacatatgg
ggaggctttgcctatctgcaggacatgatggaccacgccgttatacgcttgaaaacttca
aagactcaacctcttggtgtttttgttcagcaaatcccatacccttgctttgtggatgac
gtcttcatacagagtattggaacggttctccccatgttcctgatcctggccttcatgtac
tccgtgtgcatgagcatcaaaagcctggtgctggagaaggagctgcggctcaaggaggtg
ctgcgagccgttggcgttcagagcggcgccctgtgggccgccaggttcacagagaacatt
gttctgctcactgttccctgtgcgatcataagtgtcatggttaagtacggcaaagtgctc
caatacagcgacccctcagtaatctttgtcttcctgctggtgttctgcctggccaccatc
tctcagtgcttcttcattagcgtcttcttctcaaaggccaacctagcagcggcgtgcggt
ggcctcatctacttcctcctctacctgccgcacgtcctctgctacgcctggagggacgtc
atgggtttcggggccaaggtcgccgtgagcttactttcgtgcgtggcctttggctacggc
tgtgagaaattttccaaatacgaggagcaaggcatcgggattcagtggcacaacataggc
aagagtccagaagagggggatcgctacaccttcatcgtgtccatcgtgatgatgctcctt
gatgctcttttatactgggtgctcacgtggtacattgaaaatgtcttcccaggtcagtat
ggaattcccaaaccgtggtatttccctttcacttcctcgtattggtgtgggacagcatca
gcgcctgaacataaccctgatttgctgctgcactccactgccaatgacgaatatatggag
aaaccgcctcctgatataaaagcaggggtctcaattcgcaaccttgtcaaaatctacaag
actgggaagaagcttgcagtggacggactgagcctggacttctacgagaatcagattaca
tcatttcttggccacaacggagcaggaaaaaccaccacaatgtccattctgacgggactg
ttcccgcccacatcaggaacggctctcatcagtggatacgacattcgaacagacatagac
atcatccggaagtacttgggaatgtgtccacagcataacgtcttattcaacgaattaact
gtagaggagcacatttacttctatgcccgactgaaaggacgcagcagaagcgaagttgag
tctgagatggaccagatgattaaagatgttggtttaccacataagcggaaggaactcgct
aagaacttgtcaggtggcatgcagcgtaaactgtctgtggcgatagcgtttgttggaggt
tcaaaaatcgtaatcttagacgaacctaccgcaggggtggatccctacgctcgcaggggg
atttgggaactgctgttaaagtacaaacaaggtcgcaccatcattttgtcaacacaccat
atggacgaggcagacattttaggagatcgaattgccatcatctcccatggcaagatgcgt
tgctgtggttcttcactcttcttgaagaaatgttttgggagcggctactacctaactctg
gtcagaagtgggactgaaaaaatgtcaaatcaacgacaaaatatgacccagagacatatc
aacgagaaaaaaacagagacggactgcccttccaggagcagtccagatgatggcattggc
agtcaaacctgggacaactcagatcccacagatttggcagctgtgactcagcttgtgcgg
tgccatgtccccgaggctgtctttttggagagcatcggccaggaaatcaccttcatactg
ccctacagtggagccagagatgggactttttctgctctcttccaaaagcttgacctggct
atggctgaccttggcctgaccagctacggtatttctgataccacactggaggagatattc
ctgaaagtggcagaagacactgaagtagatgcagaaataccagcagcaaaggagccgttg
gtgagggactggaagagaagctcccgcaaatcgaagagaaacagcatcgccagcgtccgc
agtaaaatggagcacttcaatgggatgagtgatttaaaggaaaggttttccagtaaagtg
gcagattgtaagaaaagtgcaagcatcaatggaagaggatccatggtcatcactgggtgg
aagctgatcagaaggcagtttctggcactctttatcaagcgctttcaccacgcccgaagg
agccgcaagggactcattgcacaggtgatcctgccagctttcttcgtgtgcctgtctctg
atcttctccctcatcgtcccaccattcgctgactaccctagtctggagctgcagccgtgg
atgtatggtctacctcaaaccaccttttatagcaaggacttgcaagagaacgtggaggtg
tccaaggtggtggaaacgttggtgaacaaccctgggtttgggacacgatgcatgactgaa
gatccaataccgattcagaacacaacagacaccctgctgaatttgactggacgaaacatg
acggacttcttggtcaagacctttgagcactttggtaaaaaaaggtatggagggatctct
gttggagcaatcaactcacaagtccgactgaccgaagcagggatccaagaagttttgagg
gatttaaaagatctattcaattcctctcaggataacgttactgatcagacgttccagagg
gctgagacgctgttgaagaagctgggaaccagggacaatgtcaaggtgtggttctacaac
caagcatggcacagcatggtctctttcctaagtgtggccaacaatggtatcctgagaggt
aacttgcccgtgggacagaacctacgccaacatggcatctccatctccaatcaccccctc
aacctcaccaaggaacagctctccttcatggctatggccacaacctcgactgacgtagtg
gtgtccatctgcgttatttttgccatgtccttcatccctgccagctttgtcctctttctc
atccaagagagggtgagcaaagccaagcatctgcaatttgtcagcggagtcaacccagct
gtctactggttagccaactttgcctgggacatgtgtaactacatcatcccctgcttcatt
gtgatcatgatcttcctcgcctttcaacaaaaagcatacgtctcgcctcctaacctgccc
gccttgattttgctgcttattttatacgggtgggccattactcccatgatgtatcctgcc
tccttcatgttcagtgtgcccagcacggcgtacgtggtgctgacctgcatcaacctcttc
atcggtattaacggcagcgtggccactttcatcatggagctctttgatgacgacaatgtc
gcccacatcaacaatatagtgaagcaggtgctgctgattttcccacatttctgtttgggc
agagggttgatcgacatggccacgaaccaggccatggcaacgctcttcagcagttttggg
gaaaaccgttttaaggatccactgagctgggaaatggtggggaaaaacctctgcgctatg
tccatccagggaattgtgatgttcacctttacaatcctcatccaatataagttcttctgc
aaacccagactcatttccgtaaaggcaccatctgcggaggaagaggatgttgatgttgcc
cgggaacgaaggcgggtgtacgaaggcaaagctcagaacgacctgctaaccatctatgac
ctcactaaggtataccctcggaagagcgcccctgctgtggacaggctatgtgtgggcgta
cctgctgcagagtgttttggtttgctgggcatcaacggagctgggaaaactacaacgttc
aagatgctgacaggagacatcccagtctccagtggagaggccttcctaaacggctacagc
atacgaacagaaatgagctacgttcaccagaacctgggctactgtccacagtttgatgcc
atcaacgaccttctgacgggacgagagcacctggagttttacggcaggttaagaggggta
ccagaaaacgaggttgccacggtggctgagtgggggattcagaagttggggctcgtcaag
tatgccaacaagtcagcaggaacgtacagcggtgggaacaaacgcaaactctccacagca
atagctctgatcgggtgtccccctgtgattttcctggacgagcccaccactgggatggac
cccaaagcacggcgcttcttgtgggactgcatcttgagtgtcatcaaagagggacgctcc
gtcatcctcacatcacacagtatggaggagtgtgaggcactgtgcacacgcatggccatt
atggttaatggttgctttaagtgccttgggagcatccagcatcttaaaaaccgatttggt
gatggctacacggtgatcgtacgggtcgccggttctcctcctgagcttaagccagtcgag
gactttgtccagcagacgttcccaggcagtgttctcaaggagagtcaccacaacaccctc
cagtaccagcttccacacgcaccaggagctctcgccaacatctttggccacttcaccagt
caccagcagaggcttggtttggaggactactctgtgtcccaaactactctggatcaggtc
tttgtgaattttgcgagtcaccagcatgatgaggacgactctcgggcctacagcaacccg
gtggacatttccgatgaactgccactcaatgcagtgcagacctccaatgaagctaagacg
gtttaa
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integrated database retrieval system
